RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 AGPAT4-IT1Q9H0P7 198 aa5.82□□□□□ -1.48
TCF4-216ENST00000562680 PLA2G2EQ9NZK7 142 aa5.82□□□□□ -1.48
TCF4-216ENST00000562680 SUMO2P61956 95 aaKnown RBP5.82□□□□□ -1.48
TCF4-216ENST00000562680 SFTA2Q6UW10 78 aa5.82□□□□□ -1.48
TCF4-216ENST00000562680 IGHV4OR15-8A0A075B7B6 117 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 A0A087WW49 117 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 RPL35AP18077 110 aaKnown RBP5.81□□□□□ -1.48
TCF4-216ENST00000562680 C2orf82Q6UX34 121 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 BBC3Q96PG8 261 aaPredicted RBP5.81□□□□□ -1.48
TCF4-216ENST00000562680 PSMG3-AS1Q96PY0 264 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 ZNF462Q96JM2 2506 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 SPINK13Q1W4C9 94 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 Q71RC1 249 aaPredicted RBP5.81□□□□□ -1.48
TCF4-216ENST00000562680 GATD1Q8NB37 220 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 ZC2HC1AQ96GY0 325 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 TRGV1A0A0A0MS02 117 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 A0A0U1RRA0 63 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 D6R8Y8 96 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 BRI3O95415 125 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 CRIP2P52943 208 aaPredicted RBP5.81□□□□□ -1.48
TCF4-216ENST00000562680 FAM104BQ5XKR9 115 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 BAALCQ8WXS3 180 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 CCDC140Q96MF4 163 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 FAM236AA0A1B0GUQ0 79 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 FAM236BA0A1B0GV22 79 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 LAGE3Q14657 143 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 C9orf47Q6ZRZ4 202 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 WIPF2Q8TF74 440 aaPredicted RBP5.81□□□□□ -1.48
TCF4-216ENST00000562680 SCRT2Q9NQ03 307 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 LRRK2Q5S007 2527 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 RNASE1P07998 156 aaKnown RBP5.81□□□□□ -1.48
TCF4-216ENST00000562680 TRPT1Q86TN4 253 aaKnown RBP5.81□□□□□ -1.48
TCF4-216ENST00000562680 C8orf49Q96NF6 230 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 YPEL4Q96NS1 127 aa5.81□□□□□ -1.48
TCF4-216ENST00000562680 SLURP1P55000 103 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 ZNF493Q6ZR52 646 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 NDUFA11Q86Y39 141 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 ZNF876PQ49A33 203 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 DNAL4O96015 105 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 CTRLP40313 264 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 CEND1Q8N111 149 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 AMTNQ6UX39 209 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 IFI27L1Q96BM0 104 aa5.8□□□□□ -1.48
TCF4-216ENST00000562680 IGLL5B9A064 214 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 IGKCP01834 107 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 IGLC6P0CF74 106 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 MED14OSP0DP75 135 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 C17orf77Q96MU5 243 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 NUPR1O60356 82 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 MORN5Q5VZ52 161 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 ODF3Q96PU9 254 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 XCL2Q9UBD3 114 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 ACYP1P07311 99 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 Q6Q795 121 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 C14orf178Q8N769 122 aaPredicted RBP5.79□□□□□ -1.48
TCF4-216ENST00000562680 CHCHD5Q9BSY4 110 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 HCFC1P51610 2035 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 HILS1P60008 231 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 RBM3P98179 157 aaKnown RBP5.79□□□□□ -1.48
TCF4-216ENST00000562680 IGF2BP2-AS1Q96M15 143 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 A0A1B0GX51 115 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 TMEM243Q9BU79 118 aa5.79□□□□□ -1.48
TCF4-216ENST00000562680 SLC25A20O43772 301 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 DEFB136Q30KP8 78 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 TMEM158Q8WZ71 300 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 EPG5Q9HCE0 2579 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 Q6ZSV7 163 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 K7EMI3 77 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 FXYD7P58549 80 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 S100A7L2Q5SY68 101 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 MYO9AB2RTY4 2548 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 ZFYVE26Q68DK2 2539 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 ASPHD1Q5U4P2 390 aa5.78□□□□□ -1.48
TCF4-216ENST00000562680 C12orf74Q32Q52 190 aa5.77□□□□□ -1.48
TCF4-216ENST00000562680 USP9YO00507 2555 aaPredicted RBP5.77□□□□□ -1.49
TCF4-216ENST00000562680 K7ERJ3 54 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 HTN3P15516 51 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 PSMB8P28062 276 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 UFSP1Q6NVU6 142 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 ZFAND3Q9H8U3 227 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 ZNF702PQ9H963 129 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 LINC01548A6NM66 108 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 NCR2O95944 276 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 IGLV1-40P01703 118 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 HLA-DMBP28068 263 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 PRRC2AP48634 2157 aaKnown RBP5.77□□□□□ -1.49
TCF4-216ENST00000562680 USP9XQ93008 2570 aaPredicted RBP5.77□□□□□ -1.49
TCF4-216ENST00000562680 M0R2P5 195 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 SPATA12Q7Z6I5 190 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 C6orf226Q5I0X4 101 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 Q8N8P6 123 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 ZNF503Q96F45 646 aa5.77□□□□□ -1.49
TCF4-216ENST00000562680 SONP18583 2426 aaKnown RBP5.76□□□□□ -1.49
TCF4-216ENST00000562680 FAM240AA0A1B0GVK7 77 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 CD28P10747 220 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 KRTAP10-9P60411 292 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 UNQ9165/PRO28630Q6UXU0 137 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 RBMY1BA6NDE4 496 aaKnown RBP5.76□□□□□ -1.49
TCF4-216ENST00000562680 RBMY1EA6NEQ0 496 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms