RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 TNP2Q05952 138 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 GAGE1Q13065 139 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 GAGE4Q13068 117 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 GAGE5Q13069 117 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 SPANXN1Q5VSR9 72 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 ATP6V0E2Q8NHE4 81 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 TPPP3Q9BW30 176 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 BIN3Q9NQY0 253 aa11.01□□□□□ -0.65
COMMD4-206ENST00000562610 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 SNAI2O43623 268 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 P01737 135 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 OR5AL1P0C617 328 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 GZMBP10144 247 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 CEBPGP53567 150 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 TIRAPP58753 221 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 ZNF56Q15929 161 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 OR10J3Q5JRS4 329 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 TOR2AQ5JU69 321 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 LYPD6BQ8NI32 183 aa11□□□□□ -0.65
COMMD4-206ENST00000562610 TRAV9-2A0A087WT02 112 aa10.99□□□□□ -0.65
COMMD4-206ENST00000562610 TRAV8-6A0A0B4J262 113 aa10.99□□□□□ -0.65
COMMD4-206ENST00000562610 CRYGDP07320 174 aa10.99□□□□□ -0.65
COMMD4-206ENST00000562610 EVI2AP22794 236 aa10.99□□□□□ -0.65
COMMD4-206ENST00000562610 RPS20P60866 119 aaKnown RBP10.99□□□□□ -0.65
COMMD4-206ENST00000562610 PKD1P98161 4303 aa10.99□□□□□ -0.65
COMMD4-206ENST00000562610 XKRY2A2RUG3 117 aa10.98□□□□□ -0.65
COMMD4-206ENST00000562610 TMEM250H0YL14 139 aa10.98□□□□□ -0.65
COMMD4-206ENST00000562610 DNAH10OSP0CZ25 163 aa10.98□□□□□ -0.65
COMMD4-206ENST00000562610 LINC00694P0DN24 101 aa10.98□□□□□ -0.65
COMMD4-206ENST00000562610 FER1L6-AS1Q8NA97 138 aa10.98□□□□□ -0.65
COMMD4-206ENST00000562610 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-206ENST00000562610 EIF5A2Q9GZV4 153 aaKnown RBP10.98□□□□□ -0.65
COMMD4-206ENST00000562610 GTSF1LQ9H1H1 148 aa10.98□□□□□ -0.65
COMMD4-206ENST00000562610 PKHD1P08F94 4074 aa10.98□□□□□ -0.65
COMMD4-206ENST00000562610 IGHV3-38A0A0C4DH36 116 aa10.97□□□□□ -0.65
COMMD4-206ENST00000562610 BTF3P20290 206 aaKnown RBP10.97□□□□□ -0.65
COMMD4-206ENST00000562610 LELP1Q5T871 98 aa10.97□□□□□ -0.65
COMMD4-206ENST00000562610 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
COMMD4-206ENST00000562610 Q9UF83 564 aa10.97□□□□□ -0.65
COMMD4-206ENST00000562610 IGLC6P0CF74 106 aa10.96□□□□□ -0.65
COMMD4-206ENST00000562610 SMIM17P0DL12 118 aa10.96□□□□□ -0.65
COMMD4-206ENST00000562610 K7EN84 100 aa10.95□□□□□ -0.66
COMMD4-206ENST00000562610 C10orf126Q8N4M7 172 aa10.95□□□□□ -0.66
COMMD4-206ENST00000562610 NUDT10Q8NFP7 164 aa10.95□□□□□ -0.66
COMMD4-206ENST00000562610 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
COMMD4-206ENST00000562610 NUDT11Q96G61 164 aa10.95□□□□□ -0.66
COMMD4-206ENST00000562610 FAM210AQ96ND0 272 aa10.95□□□□□ -0.66
COMMD4-206ENST00000562610 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
COMMD4-206ENST00000562610 F5H697 171 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 K7EP13 123 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 IGHV3-30P01768 117 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 IGHV3-33P01772 117 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 IGHV3-30-3P0DP02 117 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 IGHV3-30-5P0DP03 117 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 RAB4BP61018 213 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
COMMD4-206ENST00000562610 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
COMMD4-206ENST00000562610 RPP21Q9H633 154 aaKnown RBP10.94□□□□□ -0.66
COMMD4-206ENST00000562610 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 TNFRSF18Q9Y5U5 241 aa10.94□□□□□ -0.66
COMMD4-206ENST00000562610 TRBV10-1A0A0K0K1A3 114 aa10.93□□□□□ -0.66
COMMD4-206ENST00000562610 MGPP08493 103 aa10.93□□□□□ -0.66
COMMD4-206ENST00000562610 CACNG7P62955 275 aa10.93□□□□□ -0.66
COMMD4-206ENST00000562610 LINC01556Q5JQF7 62 aa10.93□□□□□ -0.66
COMMD4-206ENST00000562610 NFE4Q86UQ8 179 aa10.93□□□□□ -0.66
COMMD4-206ENST00000562610 SMIM7Q9BQ49 75 aa10.93□□□□□ -0.66
COMMD4-206ENST00000562610 A0A087WWC5 75 aa10.92□□□□□ -0.66
COMMD4-206ENST00000562610 TEX261Q6UWH6 196 aa10.92□□□□□ -0.66
COMMD4-206ENST00000562610 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
COMMD4-206ENST00000562610 Q6ZRN7 208 aaPredicted RBP10.92□□□□□ -0.66
COMMD4-206ENST00000562610 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
COMMD4-206ENST00000562610 F2Z2F3 143 aa10.91□□□□□ -0.66
COMMD4-206ENST00000562610 ZNF727A8MUV8 499 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 TRGC1P0CF51 173 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 CTRLP40313 264 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 UBE2D3P61077 147 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 UBE2D2P62837 147 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 Q9HAA7 133 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
COMMD4-206ENST00000562610 GATCO43716 136 aaKnown RBP10.89□□□□□ -0.67
COMMD4-206ENST00000562610 NDUFS6O75380 124 aaKnown RBP10.89□□□□□ -0.67
COMMD4-206ENST00000562610 SRP19P09132 144 aaKnown RBP10.89□□□□□ -0.67
COMMD4-206ENST00000562610 SPATA12Q7Z6I5 190 aa10.89□□□□□ -0.67
COMMD4-206ENST00000562610 Q8N3U1 123 aa10.89□□□□□ -0.67
COMMD4-206ENST00000562610 OR10G8Q8NGN5 311 aa10.89□□□□□ -0.67
COMMD4-206ENST00000562610 DNAH11Q96DT5 4516 aa10.88□□□□□ -0.67
COMMD4-206ENST00000562610 C16orf90A8MZG2 172 aa10.88□□□□□ -0.67
COMMD4-206ENST00000562610 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.88□□□□□ -0.67
COMMD4-206ENST00000562610 URGCP-MRPS24S4R325 110 aa10.88□□□□□ -0.67
COMMD4-206ENST00000562610 EREGO14944 169 aa10.87□□□□□ -0.67
COMMD4-206ENST00000562610 PSCAO43653 123 aa10.87□□□□□ -0.67
COMMD4-206ENST00000562610 NTF3P20783 257 aa10.87□□□□□ -0.67
COMMD4-206ENST00000562610 TWIST1Q15672 202 aa10.87□□□□□ -0.67
COMMD4-206ENST00000562610 FAM231DQ6ZW35 169 aa10.87□□□□□ -0.67
COMMD4-206ENST00000562610 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
COMMD4-206ENST00000562610 IBA57-AS1B1ANH7 110 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms