RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 AMN1Q8IY45 258 aa16.07■□□□□ 0.16
SYNGR3-202ENST00000562045 NDUFAF3Q9BU61 184 aa16.07■□□□□ 0.16
SYNGR3-202ENST00000562045 DAZ2Q13117 558 aaKnown RBP16.06■□□□□ 0.16
SYNGR3-202ENST00000562045 DPH3P1Q9H4G8 78 aa16.06■□□□□ 0.16
SYNGR3-202ENST00000562045 PLAC8L1A1L4L8 177 aa16.05■□□□□ 0.16
SYNGR3-202ENST00000562045 SMIM17P0DL12 118 aa16.05■□□□□ 0.16
SYNGR3-202ENST00000562045 MUC4Q99102 2169 aa16.05■□□□□ 0.16
SYNGR3-202ENST00000562045 KIAA1644Q3SXP7 199 aa16.05■□□□□ 0.16
SYNGR3-202ENST00000562045 C14orf178Q8N769 122 aaPredicted RBP16.05■□□□□ 0.16
SYNGR3-202ENST00000562045 LGALS9BQ3B8N2 356 aa16.04■□□□□ 0.16
SYNGR3-202ENST00000562045 RASL10AQ92737 203 aa16.04■□□□□ 0.16
SYNGR3-202ENST00000562045 STARD9Q9P2P6 4700 aa16.04■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BKO60814 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BJP06899 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 MIFP14174 115 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 RAB4AP20338 218 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BOP23527 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BBP33778 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BDP58876 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BCP62807 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST2H2BEQ16778 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BHQ93079 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 RNF185Q96GF1 192 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BNQ99877 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 HIST1H2BMQ99879 126 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 JPT2Q9H910 190 aa16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 NOP10Q9NPE3 64 aaKnown RBP16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 MRPL16Q9NX20 251 aaKnown RBP16.03■□□□□ 0.16
SYNGR3-202ENST00000562045 A8MWV9 139 aa16.02■□□□□ 0.16
SYNGR3-202ENST00000562045 TRGV1A0A0A0MS02 117 aa16.02■□□□□ 0.15
SYNGR3-202ENST00000562045 MRPL51Q4U2R6 128 aaKnown RBP16.02■□□□□ 0.15
SYNGR3-202ENST00000562045 C11orf68Q9H3H3 251 aaKnown RBP16.02■□□□□ 0.15
SYNGR3-202ENST00000562045 SRIP30626 198 aa16.01■□□□□ 0.15
SYNGR3-202ENST00000562045 KIF25-AS1Q9Y6Z4 181 aa16.01■□□□□ 0.15
SYNGR3-202ENST00000562045 A0A087WWL8 130 aa16■□□□□ 0.15
SYNGR3-202ENST00000562045 PPBPP02775 128 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 MGPP08493 103 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 EMP1P54849 157 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 CTAG1AP78358 180 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 FAM74A4Q5TZK3 123 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 LINC00518Q8N0U6 118 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 ORMDL3Q8N138 153 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 ALKBH7Q9BT30 221 aaPredicted RBP15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 D6R8Y8 96 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 CRYGDP07320 174 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 CKS2P33552 79 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 Q6ZTI0 123 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 CELA1Q9UNI1 258 aa15.99■□□□□ 0.15
SYNGR3-202ENST00000562045 LINC00315P59091 139 aa15.98■□□□□ 0.15
SYNGR3-202ENST00000562045 MRAP2Q96G30 205 aa15.98■□□□□ 0.15
SYNGR3-202ENST00000562045 SAMD10Q9BYL1 202 aa15.98■□□□□ 0.15
SYNGR3-202ENST00000562045 POM121L12Q8N7R1 296 aa15.97■□□□□ 0.15
SYNGR3-202ENST00000562045 MUC7Q8TAX7 377 aa15.97■□□□□ 0.15
SYNGR3-202ENST00000562045 CFAP126Q5VTH2 177 aa15.97■□□□□ 0.15
SYNGR3-202ENST00000562045 RHODO00212 210 aa15.96■□□□□ 0.15
SYNGR3-202ENST00000562045 RS1O15537 224 aa15.96■□□□□ 0.15
SYNGR3-202ENST00000562045 PRELID3AQ96N28 172 aa15.96■□□□□ 0.15
SYNGR3-202ENST00000562045 S100A6P06703 90 aa15.95■□□□□ 0.14
SYNGR3-202ENST00000562045 NANOS2P60321 138 aaKnown RBP15.95■□□□□ 0.14
SYNGR3-202ENST00000562045 ZNF56Q15929 161 aa15.95■□□□□ 0.14
SYNGR3-202ENST00000562045 OR10J3Q5JRS4 329 aa15.95■□□□□ 0.14
SYNGR3-202ENST00000562045 TRAV26-2A0A0B4J265 109 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 LYRM9A8MSI8 78 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 F5H697 171 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 SMKR1H3BMG3 65 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 NCR2O95944 276 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 ZFAND6Q6FIF0 208 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 LAMTOR2Q9Y2Q5 125 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 TRGV2A0A075B6R0 118 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 GAGE12BA1L429 117 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 GAGE7O76087 117 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 GAGE12FP0CL80 117 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 GAGE12GP0CL81 117 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 GAGE12IP0CL82 117 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 UFSP1Q6NVU6 142 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 ZFP2Q6ZN57 461 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 OR4C5Q8NGB2 326 aa15.94■□□□□ 0.14
SYNGR3-202ENST00000562045 TRAV4A0A0B4J268 109 aa15.93■□□□□ 0.14
SYNGR3-202ENST00000562045 Q0VG73 95 aa15.93■□□□□ 0.14
SYNGR3-202ENST00000562045 C11orf45Q8TAV5 145 aa15.93■□□□□ 0.14
SYNGR3-202ENST00000562045 C18orf32Q8TCD1 76 aa15.93■□□□□ 0.14
SYNGR3-202ENST00000562045 DYNC2H1Q8NCM8 4307 aaKnown RBP15.92■□□□□ 0.14
SYNGR3-202ENST00000562045 NDUFA6P56556 154 aa15.92■□□□□ 0.14
SYNGR3-202ENST00000562045 LINC00612Q8N6U2 182 aa15.92■□□□□ 0.14
SYNGR3-202ENST00000562045 FAM222AQ5U5X8 452 aa15.91■□□□□ 0.14
SYNGR3-202ENST00000562045 SUMO4Q6EEV6 95 aa15.91■□□□□ 0.14
SYNGR3-202ENST00000562045 CIDEAO60543 219 aa15.91■□□□□ 0.14
SYNGR3-202ENST00000562045 C18orf15Q96N68 181 aa15.91■□□□□ 0.14
SYNGR3-202ENST00000562045 DKK2Q9UBU2 259 aa15.91■□□□□ 0.14
SYNGR3-202ENST00000562045 IGHV3-73A0A0B4J1V6 119 aa15.9■□□□□ 0.14
SYNGR3-202ENST00000562045 GAS8-AS1O95177 125 aa15.9■□□□□ 0.14
SYNGR3-202ENST00000562045 PPP1R17O96001 155 aa15.9■□□□□ 0.14
SYNGR3-202ENST00000562045 NPYP01303 97 aa15.9■□□□□ 0.14
SYNGR3-202ENST00000562045 BAGE3Q86Y29 109 aa15.9■□□□□ 0.14
SYNGR3-202ENST00000562045 TNFRSF6BO95407 300 aa15.89■□□□□ 0.13
SYNGR3-202ENST00000562045 DEFB130BP0DP73 79 aa15.89■□□□□ 0.13
SYNGR3-202ENST00000562045 DEFB130AP0DP74 79 aa15.89■□□□□ 0.13
SYNGR3-202ENST00000562045 GATA1P15976 413 aaPredicted RBP15.89■□□□□ 0.13
SYNGR3-202ENST00000562045 COA6Q5JTJ3 125 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms