RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 K7EP13 123 aa16.93■□□□□ 0.3
NME3-202ENST00000561637 EREGO14944 169 aa16.93■□□□□ 0.3
NME3-202ENST00000561637 FRZBQ92765 325 aa16.93■□□□□ 0.3
NME3-202ENST00000561637 PGPEP1Q9NXJ5 209 aa16.93■□□□□ 0.3
NME3-202ENST00000561637 A0A087WWL8 130 aa16.92■□□□□ 0.3
NME3-202ENST00000561637 RPL19P84098 196 aaKnown RBP16.92■□□□□ 0.3
NME3-202ENST00000561637 LINC01559Q495D7 138 aa16.92■□□□□ 0.3
NME3-202ENST00000561637 A0A0D9SG52 128 aa16.91■□□□□ 0.3
NME3-202ENST00000561637 KANTRA0A1W2PQU2 76 aa16.91■□□□□ 0.3
NME3-202ENST00000561637 IBA57-AS1B1ANH7 110 aa16.91■□□□□ 0.3
NME3-202ENST00000561637 M0R381 172 aa16.91■□□□□ 0.3
NME3-202ENST00000561637 PIK3CD-AS1Q5SR53 167 aa16.91■□□□□ 0.3
NME3-202ENST00000561637 FAM74A4Q5TZK3 123 aa16.91■□□□□ 0.3
NME3-202ENST00000561637 LRCOL1A6NCL2 159 aa16.9■□□□□ 0.3
NME3-202ENST00000561637 TMUB2Q71RG4 321 aa16.9■□□□□ 0.3
NME3-202ENST00000561637 TCEAL7Q9BRU2 100 aa16.9■□□□□ 0.3
NME3-202ENST00000561637 DNAH8Q96JB1 4490 aa16.9■□□□□ 0.3
NME3-202ENST00000561637 UMAD1C9J7I0 102 aa16.89■□□□□ 0.29
NME3-202ENST00000561637 SMR3BP02814 79 aaPredicted RBP16.89■□□□□ 0.29
NME3-202ENST00000561637 CCL20P78556 96 aa16.89■□□□□ 0.29
NME3-202ENST00000561637 SYT8Q8NBV8 401 aa16.88■□□□□ 0.29
NME3-202ENST00000561637 SFRP2Q96HF1 295 aa16.88■□□□□ 0.29
NME3-202ENST00000561637 PHLDA3Q9Y5J5 127 aa16.88■□□□□ 0.29
NME3-202ENST00000561637 TPT1P13693 172 aaKnown RBP16.87■□□□□ 0.29
NME3-202ENST00000561637 CDPF1Q6NVV7 123 aa16.87■□□□□ 0.29
NME3-202ENST00000561637 H2AFB1P0C5Y9 115 aa16.86■□□□□ 0.29
NME3-202ENST00000561637 MUC21A0A0G2JKD1 596 aa16.85■□□□□ 0.29
NME3-202ENST00000561637 MUC21A0A140T8X8 626 aa16.85■□□□□ 0.29
NME3-202ENST00000561637 RHODO00212 210 aa16.85■□□□□ 0.29
NME3-202ENST00000561637 PSCAO43653 123 aa16.85■□□□□ 0.29
NME3-202ENST00000561637 PFDN1O60925 122 aa16.85■□□□□ 0.29
NME3-202ENST00000561637 WFDC2Q14508 124 aa16.85■□□□□ 0.29
NME3-202ENST00000561637 DAZ4Q86SG3 579 aaKnown RBP16.85■□□□□ 0.29
NME3-202ENST00000561637 MLST8Q9BVC4 326 aa16.85■□□□□ 0.29
NME3-202ENST00000561637 DAZ3Q9NR90 486 aaKnown RBP16.85■□□□□ 0.29
NME3-202ENST00000561637 HAMPP81172 84 aa16.84■□□□□ 0.29
NME3-202ENST00000561637 BAGE2Q86Y30 109 aa16.84■□□□□ 0.29
NME3-202ENST00000561637 OR10AG1Q8NH19 301 aa16.84■□□□□ 0.29
NME3-202ENST00000561637 ZFP82Q8N141 532 aa16.83■□□□□ 0.28
NME3-202ENST00000561637 DNAJC30Q96LL9 226 aa16.83■□□□□ 0.28
NME3-202ENST00000561637 DERL1Q9BUN8 251 aa16.83■□□□□ 0.28
NME3-202ENST00000561637 PRR27Q6MZM9 219 aa16.82■□□□□ 0.28
NME3-202ENST00000561637 GNG13Q9P2W3 67 aa16.81■□□□□ 0.28
NME3-202ENST00000561637 GCSHP23434 173 aa16.8■□□□□ 0.28
NME3-202ENST00000561637 S100A9P06702 114 aaKnown RBP16.79■□□□□ 0.28
NME3-202ENST00000561637 RPL35P42766 123 aaKnown RBP16.79■□□□□ 0.28
NME3-202ENST00000561637 IGLV5-52A0A0A0MRZ9 124 aa16.78■□□□□ 0.28
NME3-202ENST00000561637 SSTP61278 116 aa16.78■□□□□ 0.28
NME3-202ENST00000561637 EIF5AP63241 154 aaKnown RBP16.78■□□□□ 0.28
NME3-202ENST00000561637 Q8N814 137 aa16.78■□□□□ 0.28
NME3-202ENST00000561637 LECT2O14960 151 aa16.77■□□□□ 0.28
NME3-202ENST00000561637 LAGE3Q14657 143 aa16.77■□□□□ 0.28
NME3-202ENST00000561637 J3QL48 77 aa16.76■□□□□ 0.27
NME3-202ENST00000561637 C11orf52Q96A22 123 aa16.76■□□□□ 0.27
NME3-202ENST00000561637 A0A087WWC5 75 aa16.75■□□□□ 0.27
NME3-202ENST00000561637 SNAI2O43623 268 aa16.75■□□□□ 0.27
NME3-202ENST00000561637 UBE2D3P61077 147 aa16.75■□□□□ 0.27
NME3-202ENST00000561637 UBE2D2P62837 147 aa16.75■□□□□ 0.27
NME3-202ENST00000561637 NIT1Q86X76 327 aa16.75■□□□□ 0.27
NME3-202ENST00000561637 BOLA1Q9Y3E2 137 aa16.75■□□□□ 0.27
NME3-202ENST00000561637 TRAV1-1A0A0B4J248 108 aa16.74■□□□□ 0.27
NME3-202ENST00000561637 IGLV2-8P01709 118 aa16.74■□□□□ 0.27
NME3-202ENST00000561637 CXCL1P09341 107 aa16.74■□□□□ 0.27
NME3-202ENST00000561637 GZMBP10144 247 aa16.74■□□□□ 0.27
NME3-202ENST00000561637 CENPWQ5EE01 88 aa16.74■□□□□ 0.27
NME3-202ENST00000561637 SSBP4Q9BWG4 385 aaPredicted RBP16.74■□□□□ 0.27
NME3-202ENST00000561637 MANBALQ9NQG1 85 aa16.74■□□□□ 0.27
NME3-202ENST00000561637 RAB19A4D1S5 217 aa16.73■□□□□ 0.27
NME3-202ENST00000561637 FAM229AH3BQW9 127 aa16.73■□□□□ 0.27
NME3-202ENST00000561637 ZNF56Q15929 161 aa16.73■□□□□ 0.27
NME3-202ENST00000561637 NEXN-AS1Q8NBZ9 246 aa16.73■□□□□ 0.27
NME3-202ENST00000561637 TRBV10-1A0A0K0K1A3 114 aa16.72■□□□□ 0.27
NME3-202ENST00000561637 RBFOX3A6NFN3 312 aa16.72■□□□□ 0.27
NME3-202ENST00000561637 SULT1A2P50226 295 aa16.72■□□□□ 0.27
NME3-202ENST00000561637 RPL36AP83881 106 aaKnown RBP16.72■□□□□ 0.27
NME3-202ENST00000561637 TCTE3Q8IZS6 198 aa16.72■□□□□ 0.27
NME3-202ENST00000561637 RPL36ALQ969Q0 106 aaKnown RBP16.72■□□□□ 0.27
NME3-202ENST00000561637 OR5AL1P0C617 328 aa16.71■□□□□ 0.27
NME3-202ENST00000561637 FAM30AQ9NZY2 134 aa16.71■□□□□ 0.27
NME3-202ENST00000561637 KLK12Q9UKR0 248 aa16.71■□□□□ 0.27
NME3-202ENST00000561637 TRBV7-3A0A075B6L6 115 aa16.7■□□□□ 0.26
NME3-202ENST00000561637 RAB4BP61018 213 aa16.7■□□□□ 0.26
NME3-202ENST00000561637 SPANXN1Q5VSR9 72 aa16.7■□□□□ 0.26
NME3-202ENST00000561637 OR10G8Q8NGN5 311 aa16.7■□□□□ 0.26
NME3-202ENST00000561637 NTN5Q8WTR8 489 aaPredicted RBP16.7■□□□□ 0.26
NME3-202ENST00000561637 BAALCQ8WXS3 180 aa16.7■□□□□ 0.26
NME3-202ENST00000561637 TM2D2Q9BX73 214 aa16.7■□□□□ 0.26
NME3-202ENST00000561637 TRAV8-3A0A0A6YYJ7 113 aa16.69■□□□□ 0.26
NME3-202ENST00000561637 KIF25-AS1Q9Y6Z4 181 aa16.69■□□□□ 0.26
NME3-202ENST00000561637 TRBV20OR9-2A0A075B6H5 130 aa16.68■□□□□ 0.26
NME3-202ENST00000561637 RAB5CP51148 216 aa16.68■□□□□ 0.26
NME3-202ENST00000561637 TPPP3Q9BW30 176 aa16.67■□□□□ 0.26
NME3-202ENST00000561637 URGCP-MRPS24S4R325 110 aa16.67■□□□□ 0.26
NME3-202ENST00000561637 UBR4Q5T4S7 5183 aa16.67■□□□□ 0.26
NME3-202ENST00000561637 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.66■□□□□ 0.26
NME3-202ENST00000561637 OR2D3Q8NGH3 330 aa16.66■□□□□ 0.26
NME3-202ENST00000561637 UBE2WQ96B02 151 aa16.66■□□□□ 0.26
NME3-202ENST00000561637 C19orf71A6NCJ1 209 aa16.65■□□□□ 0.26
NME3-202ENST00000561637 F5H697 171 aa16.65■□□□□ 0.26
NME3-202ENST00000561637 C1QBP02746 253 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms