RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	TFPI2	P48307	235 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	MAJIN	Q3KP22	176 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	FAM159A	Q6UWV7	190 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	POM121L12	Q8N7R1	296 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	OR9G4	Q8NGQ1	327 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	DPF1	Q92782	380 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	AP1S3	Q96PC3	154 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	DUX3	Q96PT4	197 aa		5.5	□□□□□ -1.53
ZEB1-222	ENST00000561212	HSBP1L1	C9JCN9	74 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	CCL24	O00175	119 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	GNRH2	O43555	120 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	PPP1R17	O96001	155 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	GATA1	P15976	413 aa	Predicted RBP	5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	CDKN1B	P46527	198 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	LGALS9B	Q3B8N2	356 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	LGALS9C	Q6DKI2	356 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	AMTN	Q6UX39	209 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	C11orf44	Q8N8P7	122 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	C20orf78	Q9BR46	151 aa		5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.49	□□□□□ -1.53
ZEB1-222	ENST00000561212	TRAV26-2	A0A0B4J265	109 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	TRAV12-3	A0A0B4J271	114 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212		K7EMI3	77 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	HLA-DRB4	P13762	266 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	HNRNPA3	P51991	378 aa	Known RBP	5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	KHDC1L	Q5JSQ8	128 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212		Q6ZN92	141 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	IFI27L1	Q96BM0	104 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	C9orf85	Q96MD7	179 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	SMIM2	Q9BVW6	85 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	MRPS16	Q9Y3D3	137 aa	Known RBP	5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	HLA-DRB4	X5D2U9	266 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	TRRAP	Q9Y4A5	3859 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	MUC4	Q99102	2169 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	IGHV3-16	A0A0C4DH30	117 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	RPL32	P62910	135 aa	Known RBP	5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	LAGE3	Q14657	143 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	DEFB114	Q30KQ6	69 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	TMEM61	Q8N0U2	210 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	C14orf178	Q8N769	122 aa	Predicted RBP	5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	RASL10A	Q92737	203 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	GOLT1B	Q9Y3E0	138 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	KIF25-AS1	Q9Y6Z4	181 aa		5.48	□□□□□ -1.53
ZEB1-222	ENST00000561212	IGHV1OR15-1	A0A075B7D0	117 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	TRAV25	A0A0B4J276	109 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	TMEM238L	A0A1B0GVL6	79 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	hDV102S1	A0JD36	115 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212		H0Y8G0	127 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	ATP5L	O75964	103 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	CD7	P09564	240 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	LINC00315	P59091	139 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	SUMO2	P61956	95 aa	Known RBP	5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	SPINK13	Q1W4C9	94 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	KRTAP5-3	Q6L8H2	238 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	NDUFA11	Q86Y39	141 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	DYNLRB2	Q8TF09	96 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	CITED1	Q99966	193 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	AGRN	O00468	2067 aa		5.47	□□□□□ -1.53
ZEB1-222	ENST00000561212	STAB1	Q9NY15	2570 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	TRGV11	A0A075B6L2	103 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	TRAV12-2	A0A075B6T6	113 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212		A0A1W2PRX2	142 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212		H3BMM0	161 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	SPRY2	O43597	315 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	IGKV3-20	P01619	116 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	SMIM17	P0DL12	118 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	FXYD7	P58549	80 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	DEFB131A	P59861	70 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	NUTF2	P61970	127 aa	Known RBP	5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	ORMDL2	Q53FV1	153 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	SYT8	Q8NBV8	401 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	TMEM158	Q8WZ71	300 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	CLUHP3	Q96NS8	147 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	SPAG8	Q99932	426 aa	Predicted RBP	5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	PMCHL2	Q9BQD1	86 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	MCRIP2	Q9BUT9	160 aa	Known RBP	5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212	KRTAP4-11	Q9BYQ6	195 aa		5.46	□□□□□ -1.54
ZEB1-222	ENST00000561212		A0A1B0GV90	55 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	KNCN	A6PVL3	124 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	MGP	P08493	103 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	COX8A	P10176	69 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	SLC25A34	Q6PIV7	304 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212		Q8N1Y9	231 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	ZMAT4	Q9H898	229 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	MAP6D1	Q9H9H5	199 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	MDFIC	Q9P1T7	246 aa		5.45	□□□□□ -1.54
ZEB1-222	ENST00000561212	RBMY1B	A6NDE4	496 aa	Known RBP	5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	RBMY1E	A6NEQ0	496 aa	Known RBP	5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	TCAP	O15273	167 aa		5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	PAX4	O43316	350 aa		5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	NUDT3	O95989	172 aa		5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	IGLV1-51	P01701	117 aa		5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	RBMY1D	P0C7P1	496 aa	Known RBP	5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	ODF1	Q14990	250 aa		5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	KRTAP24-1	Q3LI83	254 aa		5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	CD300E	Q496F6	205 aa	Predicted RBP	5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	COL5A1-AS1	Q5SY13	56 aa		5.44	□□□□□ -1.54
ZEB1-222	ENST00000561212	PRIMA1	Q86XR5	153 aa		5.44	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms