RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ZNF80P51504 273 aaPredicted RBP7.61□□□□□ -1.19
TPM1-212ENST00000558347 TWIST1Q15672 202 aa7.61□□□□□ -1.19
TPM1-212ENST00000558347 CASC10Q5T4H9 136 aa7.61□□□□□ -1.19
TPM1-212ENST00000558347 EDA2RQ9HAV5 297 aa7.61□□□□□ -1.19
TPM1-212ENST00000558347 RETNQ9HD89 108 aa7.61□□□□□ -1.19
TPM1-212ENST00000558347 UBE2V1Q13404 147 aa7.6□□□□□ -1.19
TPM1-212ENST00000558347 BVES-AS1Q5T3Y7 98 aa7.6□□□□□ -1.19
TPM1-212ENST00000558347 SAMD13Q5VXD3 122 aa7.6□□□□□ -1.19
TPM1-212ENST00000558347 Q8TAT8 98 aa7.6□□□□□ -1.19
TPM1-212ENST00000558347 MAP1LC3AQ9H492 121 aa7.6□□□□□ -1.19
TPM1-212ENST00000558347 NXT2Q9NPJ8 142 aaKnown RBP7.6□□□□□ -1.19
TPM1-212ENST00000558347 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
TPM1-212ENST00000558347 PLECQ15149 4684 aaKnown RBP7.59□□□□□ -1.19
TPM1-212ENST00000558347 SOCS3O14543 225 aa7.59□□□□□ -1.19
TPM1-212ENST00000558347 ORM1P02763 201 aa7.59□□□□□ -1.19
TPM1-212ENST00000558347 C9orf47Q6ZRZ4 202 aa7.59□□□□□ -1.19
TPM1-212ENST00000558347 ZNF575Q86XF7 245 aa7.59□□□□□ -1.19
TPM1-212ENST00000558347 RNF185Q96GF1 192 aa7.59□□□□□ -1.19
TPM1-212ENST00000558347 FAM110AQ9BQ89 295 aa7.59□□□□□ -1.19
TPM1-212ENST00000558347 DNAH1Q9P2D7 4330 aa7.59□□□□□ -1.19
TPM1-212ENST00000558347 TRAV25A0A0B4J276 109 aa7.58□□□□□ -1.2
TPM1-212ENST00000558347 SIVA1O15304 175 aa7.58□□□□□ -1.2
TPM1-212ENST00000558347 NPYP01303 97 aa7.58□□□□□ -1.2
TPM1-212ENST00000558347 HLA-DMBP28068 263 aa7.58□□□□□ -1.2
TPM1-212ENST00000558347 TMEM78Q5T7P6 136 aa7.58□□□□□ -1.2
TPM1-212ENST00000558347 IGHV4-4A0A075B6R2 117 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 TRAV2A0A0B4J234 112 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 TRAV8-2A0A0B4J237 113 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 PRSS47A8MTI9 375 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 NCR2O95944 276 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 NUDT3O95989 172 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 PTTG1IPP53801 180 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 CACNG7P62955 275 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 SEC11AP67812 179 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 OR8A1Q8NGG7 326 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 TENM2Q9NT68 2774 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 PRAC2D3DTV9 90 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 H0Y8G0 127 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 FCER1GP30273 86 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 ERCC8Q13216 396 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 IGFL4Q6B9Z1 124 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 ZFAND6Q6FIF0 208 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 SMIM15Q7Z3B0 74 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 DCANP1Q8TF63 244 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 C16orf92Q96LL3 132 aa7.57□□□□□ -1.2
TPM1-212ENST00000558347 SPAG8Q99932 426 aaPredicted RBP7.57□□□□□ -1.2
TPM1-212ENST00000558347 K7EQG2 157 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 TAX1BP3O14907 124 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 SNAI2O43623 268 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 FGF6P10767 208 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 RPL11P62913 178 aaKnown RBP7.56□□□□□ -1.2
TPM1-212ENST00000558347 ODF3L2Q3SX64 289 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 C2orf91Q6ZV80 131 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 Q8N8P6 123 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 AGPAT4-IT1Q9H0P7 198 aa7.56□□□□□ -1.2
TPM1-212ENST00000558347 IGKV3D-20A0A0C4DH25 116 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 K7EP13 123 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 CCL25O15444 150 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 TNFRSF6BO95407 300 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 ID1P41134 155 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 RNF182Q8N6D2 247 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 TIMM8BQ9Y5J9 83 aaPredicted RBP7.55□□□□□ -1.2
TPM1-212ENST00000558347 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
TPM1-212ENST00000558347 TRBV7-9A0A0J9YWB2 115 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 SMKR1H3BMG3 65 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 ATP5LO75964 103 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 PRB4P10163 310 aaPredicted RBP7.54□□□□□ -1.2
TPM1-212ENST00000558347 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 TMEM97Q5BJF2 176 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 LINC00477Q96M19 166 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 CBY1Q9Y3M2 126 aa7.54□□□□□ -1.2
TPM1-212ENST00000558347 IGLV2-18A0A075B6J9 118 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 MUC21A0A0G2JKD1 596 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 MUC21A0A140T8X8 626 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 HSD52Q0P140 79 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 KIR3DS1Q14943 382 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 VAMP3Q15836 100 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 MUC21Q5SSG8 566 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 MSRB1Q9NZV6 116 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
TPM1-212ENST00000558347 IGKV3-7A0A075B6H7 116 aa7.52□□□□□ -1.2
TPM1-212ENST00000558347 LEPP41159 167 aa7.52□□□□□ -1.2
TPM1-212ENST00000558347 SNRPD3P62318 126 aaKnown RBP7.52□□□□□ -1.2
TPM1-212ENST00000558347 APRG1Q8IVJ8 170 aa7.52□□□□□ -1.2
TPM1-212ENST00000558347 OVOL2Q9BRP0 275 aa7.52□□□□□ -1.2
TPM1-212ENST00000558347 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.2
TPM1-212ENST00000558347 A6NDN8 102 aa7.52□□□□□ -1.21
TPM1-212ENST00000558347 K7EMI3 77 aa7.52□□□□□ -1.21
TPM1-212ENST00000558347 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
TPM1-212ENST00000558347 OR4C5Q8NGB2 326 aa7.52□□□□□ -1.21
TPM1-212ENST00000558347 TP73-AS1Q9UF72 201 aa7.52□□□□□ -1.21
TPM1-212ENST00000558347 EPPK1P58107 5090 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms