RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 C1orf229Q6ZS94 237 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-248ENST00000558190 CAMTA1Q9Y6Y1 1673 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 IGLV3-1P01715 115 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 A8MZ25 164 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 PIK3C2AO00443 1686 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV7-4-1A0A0J9YVY3 117 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 K7EIM0 57 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 LINC00310P59036 64 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 DEFB121Q5J5C9 76 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 SHPRHQ149N8 1683 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 TNFRSF13BO14836 293 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-248ENST00000558190 IGLV2-11P01706 119 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 LY6HO94772 140 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 PROK1P58294 105 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 IGKV1OR2-108A0A075B7D4 117 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 CENPVL3A0A0U1RRI6 287 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 USP9YO00507 2555 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-248ENST00000558190 SPTBN4Q9H254 2564 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 LINC00311Q8N616 119 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 WT1P19544 449 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-248ENST00000558190 LINC00308Q8TCZ7 52 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 CTSZQ9UBR2 303 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 ZNF561-AS1K7EIQ3 104 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 SCXQ7RTU7 201 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 Q8TCH9 128 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 TDRD15B5MCY1 1934 aaKnown RBP2.82□□□□□ -1.96
ATXN3-248ENST00000558190 WISP2O76076 250 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 NANOS2P60321 138 aaKnown RBP2.82□□□□□ -1.96
ATXN3-248ENST00000558190 SMAD5-AS1Q9Y6J3 95 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 GATA4P43694 442 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 SPINK13Q1W4C9 94 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 P0C879 139 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 TOPAZ1Q8N9V7 1692 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 MCM3APO60318 1980 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 RGPD2P0DJD1 1756 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 TMEM223A0PJW6 202 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 BPY2O14599 106 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 FAM223BA6NKX1 122 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 FAM223AQ8IWN6 122 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 PRORYQ9H606 182 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 NDUFC1O43677 76 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 ZMAT4Q9H898 229 aa2.82□□□□□ -1.96
ATXN3-248ENST00000558190 WNK3Q9BYP7 1800 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 CGB3P0DN86 165 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 CGB7P0DN87 165 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 TJP1Q07157 1748 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 IGKV1D-37A0A075B6S9 117 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 LOXP28300 417 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-248ENST00000558190 PRR19A6NJB7 356 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-248ENST00000558190 ZNF672Q499Z4 452 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-248ENST00000558190 KIR2DL5BQ8NHK3 375 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 NDUFB1O75438 58 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 IL17DQ8TAD2 202 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 TOGARAM1Q9Y4F4 1720 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 J3QLI3 93 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 ODF3Q96PU9 254 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 CCKP06307 115 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 TRIAP1O43715 76 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 MSRB2Q9Y3D2 182 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 M0QY20 66 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 PYGO1Q9Y3Y4 419 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 ZNF295-AS1Q8N0V1 137 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 FAM110DQ8TAY7 271 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-248ENST00000558190 LAMA4Q16363 1823 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 IGLV3-19P01714 112 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 TRAV7A0A075B6U4 112 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV4-30-2A0A087WSY4 118 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 FAM236DA0A1B0GTK5 79 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 FAM236CP0DP71 79 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 MDS2Q8NDY4 140 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 ANKHD1Q8IWZ3 2542 aaKnown RBP2.81□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV4OR15-8A0A075B7B6 117 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 A0A087WW49 117 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 PKD1L3Q7Z443 1732 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 ZNF503-AS2A6NEH8 195 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 CRYBG1Q9Y4K1 1723 aa2.81□□□□□ -1.96
ATXN3-248ENST00000558190 TAF1LQ8IZX4 1826 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 SP5Q6BEB4 398 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 MBD3L4A6NDZ8 208 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 MBD3L3A6NE82 208 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 MBD3L5A6NJ08 208 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 COX7BP24311 80 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 PSME4Q14997 1843 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 EBI3Q14213 229 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 FAM19A1Q7Z5A9 133 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 SCN9AQ15858 1988 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 BRD3OSQ6XYD6 125 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 MIFP14174 115 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 SOSTDC1Q6X4U4 206 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 MYCNOSP40205 109 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 BLCAPP62952 87 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 MUC6Q6W4X9 2439 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 ARHGAP32A7KAX9 2087 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 Q6ZSR3 168 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 A6NED7 52 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 SMCPP49901 116 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 URB1-AS1Q96HZ7 61 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms