RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 WFDC10BQ8IUB3 73 aa13.51□□□□□ -0.25
HIF1A-211ENST00000557446 EIF5A2Q9GZV4 153 aaKnown RBP13.51□□□□□ -0.25
HIF1A-211ENST00000557446 CRYGDP07320 174 aa13.5□□□□□ -0.25
HIF1A-211ENST00000557446 GZMBP10144 247 aa13.5□□□□□ -0.25
HIF1A-211ENST00000557446 CEBPGP53567 150 aa13.5□□□□□ -0.25
HIF1A-211ENST00000557446 TIRAPP58753 221 aa13.5□□□□□ -0.25
HIF1A-211ENST00000557446 C14orf178Q8N769 122 aaPredicted RBP13.5□□□□□ -0.25
HIF1A-211ENST00000557446 FAM210AQ96ND0 272 aa13.5□□□□□ -0.25
HIF1A-211ENST00000557446 BIRC6Q9NR09 4857 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 GAGE12JA6NER3 117 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 GAGE1Q13065 139 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 GAGE4Q13068 117 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 GAGE5Q13069 117 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 GAGE13Q4V321 117 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 ATP6V0E2Q8NHE4 81 aa13.49□□□□□ -0.25
HIF1A-211ENST00000557446 A0A1B0GVY2 172 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 XKRY2A2RUG3 117 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 IGLC6P0CF74 106 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 LINC00694P0DN24 101 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 SSTP61278 116 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 TEX261Q6UWH6 196 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 OCC1Q8TAD7 63 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 TPPP3Q9BW30 176 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 LY96Q9Y6Y9 160 aa13.48□□□□□ -0.25
HIF1A-211ENST00000557446 K7EN84 100 aa13.47□□□□□ -0.25
HIF1A-211ENST00000557446 NUDT10Q8NFP7 164 aa13.47□□□□□ -0.25
HIF1A-211ENST00000557446 NUDT11Q96G61 164 aa13.47□□□□□ -0.25
HIF1A-211ENST00000557446 Q9UF83 564 aa13.47□□□□□ -0.25
HIF1A-211ENST00000557446 ZNF56Q15929 161 aa13.46□□□□□ -0.25
HIF1A-211ENST00000557446 AP1S3Q96PC3 154 aa13.46□□□□□ -0.25
HIF1A-211ENST00000557446 RNASE7Q9H1E1 156 aaKnown RBP13.46□□□□□ -0.25
HIF1A-211ENST00000557446 GTSF1LQ9H1H1 148 aa13.46□□□□□ -0.25
HIF1A-211ENST00000557446 NDUFS6O75380 124 aaKnown RBP13.45□□□□□ -0.26
HIF1A-211ENST00000557446 DNAH10OSP0CZ25 163 aa13.45□□□□□ -0.26
HIF1A-211ENST00000557446 LINC00315P59091 139 aa13.45□□□□□ -0.26
HIF1A-211ENST00000557446 RPP21Q9H633 154 aaKnown RBP13.45□□□□□ -0.26
HIF1A-211ENST00000557446 DNAH2Q9P225 4427 aa13.44□□□□□ -0.26
HIF1A-211ENST00000557446 TRAV8-6A0A0B4J262 113 aa13.44□□□□□ -0.26
HIF1A-211ENST00000557446 BTF3P20290 206 aaKnown RBP13.44□□□□□ -0.26
HIF1A-211ENST00000557446 TNP2Q05952 138 aa13.44□□□□□ -0.26
HIF1A-211ENST00000557446 OR10J3Q5JRS4 329 aa13.44□□□□□ -0.26
HIF1A-211ENST00000557446 LELP1Q5T871 98 aa13.44□□□□□ -0.26
HIF1A-211ENST00000557446 SMIM7Q9BQ49 75 aa13.44□□□□□ -0.26
HIF1A-211ENST00000557446 TRBV10-1A0A0K0K1A3 114 aa13.43□□□□□ -0.26
HIF1A-211ENST00000557446 SRP19P09132 144 aaKnown RBP13.43□□□□□ -0.26
HIF1A-211ENST00000557446 EVI2AP22794 236 aa13.43□□□□□ -0.26
HIF1A-211ENST00000557446 RAB4BP61018 213 aa13.43□□□□□ -0.26
HIF1A-211ENST00000557446 CACNG7P62955 275 aa13.43□□□□□ -0.26
HIF1A-211ENST00000557446 TRAV9-2A0A087WT02 112 aa13.42□□□□□ -0.26
HIF1A-211ENST00000557446 IGHV3-38A0A0C4DH36 116 aa13.42□□□□□ -0.26
HIF1A-211ENST00000557446 F2Z2F3 143 aa13.42□□□□□ -0.26
HIF1A-211ENST00000557446 SMIM17P0DL12 118 aa13.42□□□□□ -0.26
HIF1A-211ENST00000557446 ZNF727A8MUV8 499 aa13.41□□□□□ -0.26
HIF1A-211ENST00000557446 K7EP13 123 aa13.41□□□□□ -0.26
HIF1A-211ENST00000557446 CTRLP40313 264 aa13.41□□□□□ -0.26
HIF1A-211ENST00000557446 RPL36AP83881 106 aaKnown RBP13.41□□□□□ -0.26
HIF1A-211ENST00000557446 LYZL1Q6UWQ5 148 aa13.41□□□□□ -0.26
HIF1A-211ENST00000557446 RPL36ALQ969Q0 106 aaKnown RBP13.41□□□□□ -0.26
HIF1A-211ENST00000557446 MSRB1Q9NZV6 116 aa13.41□□□□□ -0.26
HIF1A-211ENST00000557446 F5H697 171 aa13.4□□□□□ -0.26
HIF1A-211ENST00000557446 FAM231DQ6ZW35 169 aa13.4□□□□□ -0.26
HIF1A-211ENST00000557446 KIF25-AS1Q9Y6Z4 181 aa13.4□□□□□ -0.26
HIF1A-211ENST00000557446 FAT2Q9NYQ8 4349 aa13.39□□□□□ -0.27
HIF1A-211ENST00000557446 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
HIF1A-211ENST00000557446 MGPP08493 103 aa13.39□□□□□ -0.27
HIF1A-211ENST00000557446 LINC01556Q5JQF7 62 aa13.39□□□□□ -0.27
HIF1A-211ENST00000557446 LINC01551Q86U37 167 aa13.39□□□□□ -0.27
HIF1A-211ENST00000557446 C10orf126Q8N4M7 172 aa13.39□□□□□ -0.27
HIF1A-211ENST00000557446 TRBV7-3A0A075B6L6 115 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 TRGC1P0CF51 173 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 ERVFC1-1P60608 527 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 UBE2D3P61077 147 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 UBE2D2P62837 147 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 Q6ZRN7 208 aaPredicted RBP13.38□□□□□ -0.27
HIF1A-211ENST00000557446 NEXN-AS1Q8NBZ9 246 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 OR10G8Q8NGN5 311 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 TNFRSF18Q9Y5U5 241 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 DNAH17Q9UFH2 4485 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 HECTD4Q9Y4D8 3996 aa13.38□□□□□ -0.27
HIF1A-211ENST00000557446 A0A087WWC5 75 aa13.37□□□□□ -0.27
HIF1A-211ENST00000557446 NTF3P20783 257 aa13.37□□□□□ -0.27
HIF1A-211ENST00000557446 IGHV3-30P01768 117 aa13.36□□□□□ -0.27
HIF1A-211ENST00000557446 IGHV3-33P01772 117 aa13.36□□□□□ -0.27
HIF1A-211ENST00000557446 IGHV3-30-3P0DP02 117 aa13.36□□□□□ -0.27
HIF1A-211ENST00000557446 IGHV3-30-5P0DP03 117 aa13.36□□□□□ -0.27
HIF1A-211ENST00000557446 GTSF1Q8WW33 167 aa13.36□□□□□ -0.27
HIF1A-211ENST00000557446 CNFNQ9BYD5 112 aa13.36□□□□□ -0.27
HIF1A-211ENST00000557446 A8MWL6 223 aa13.35□□□□□ -0.27
HIF1A-211ENST00000557446 C9JQL5 133 aa13.35□□□□□ -0.27
HIF1A-211ENST00000557446 SRSF3P84103 164 aaKnown RBP13.35□□□□□ -0.27
HIF1A-211ENST00000557446 PEA15Q15121 130 aa13.35□□□□□ -0.27
HIF1A-211ENST00000557446 CT83Q5H943 113 aa13.35□□□□□ -0.27
HIF1A-211ENST00000557446 WDR73Q6P4I2 378 aa13.35□□□□□ -0.27
HIF1A-211ENST00000557446 NFE4Q86UQ8 179 aa13.35□□□□□ -0.27
HIF1A-211ENST00000557446 FAM74A3Q4VXF1 159 aa13.34□□□□□ -0.27
HIF1A-211ENST00000557446 DPH3P1Q9H4G8 78 aa13.34□□□□□ -0.27
HIF1A-211ENST00000557446 TWIST1Q15672 202 aa13.33□□□□□ -0.28
HIF1A-211ENST00000557446 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
HIF1A-211ENST00000557446 Q8N3U1 123 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms