RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TMSB15BA0A087X1C1 80 aa15.01□□□□□ -0.01
ACTN1-220ENST00000556433 FAM229AH3BQW9 127 aa15.01□□□□□ -0.01
ACTN1-220ENST00000556433 FAM74A4Q5TZK3 123 aa15.01□□□□□ -0.01
ACTN1-220ENST00000556433 A0A087WWL8 130 aa15□□□□□ -0.01
ACTN1-220ENST00000556433 TPT1P13693 172 aaKnown RBP15□□□□□ -0.01
ACTN1-220ENST00000556433 FHITP49789 147 aa15□□□□□ -0.01
ACTN1-220ENST00000556433 WFDC2Q14508 124 aa15□□□□□ -0.01
ACTN1-220ENST00000556433 ZNF674Q2M3X9 581 aa15□□□□□ -0.01
ACTN1-220ENST00000556433 TOR2AQ5JU69 321 aa15□□□□□ -0.01
ACTN1-220ENST00000556433 SFRP2Q96HF1 295 aa15□□□□□ -0.01
ACTN1-220ENST00000556433 VPS13BQ7Z7G8 4022 aa15□□□□□ -0.01
ACTN1-220ENST00000556433 TRBV6-1A0A0K0K1D8 114 aa14.99□□□□□ -0.01
ACTN1-220ENST00000556433 M0R381 172 aa14.99□□□□□ -0.01
ACTN1-220ENST00000556433 TCEAL7Q9BRU2 100 aa14.99□□□□□ -0.01
ACTN1-220ENST00000556433 LTAP01374 205 aa14.98□□□□□ -0.01
ACTN1-220ENST00000556433 RGS21Q2M5E4 152 aa14.98□□□□□ -0.01
ACTN1-220ENST00000556433 LINC01559Q495D7 138 aa14.98□□□□□ -0.01
ACTN1-220ENST00000556433 FAM30AQ9NZY2 134 aa14.98□□□□□ -0.01
ACTN1-220ENST00000556433 LECT2O14960 151 aa14.97□□□□□ -0.01
ACTN1-220ENST00000556433 AKR1C3P42330 323 aa14.97□□□□□ -0.01
ACTN1-220ENST00000556433 URGCP-MRPS24S4R325 110 aa14.97□□□□□ -0.01
ACTN1-220ENST00000556433 DNAH8Q96JB1 4490 aa14.96□□□□□ -0.01
ACTN1-220ENST00000556433 SMLR1H3BR10 107 aa14.96□□□□□ -0.01
ACTN1-220ENST00000556433 PAGE4O60829 102 aa14.96□□□□□ -0.01
ACTN1-220ENST00000556433 ZFP82Q8N141 532 aa14.96□□□□□ -0.01
ACTN1-220ENST00000556433 C1QBP02746 253 aa14.95□□□□□ -0.02
ACTN1-220ENST00000556433 NIT1Q86X76 327 aa14.95□□□□□ -0.02
ACTN1-220ENST00000556433 SFT2D1Q8WV19 159 aa14.94□□□□□ -0.02
ACTN1-220ENST00000556433 BAALCQ8WXS3 180 aa14.94□□□□□ -0.02
ACTN1-220ENST00000556433 COX11Q9Y6N1 276 aa14.94□□□□□ -0.02
ACTN1-220ENST00000556433 HERC1Q15751 4861 aa14.94□□□□□ -0.02
ACTN1-220ENST00000556433 SEC11BP0C7V7 166 aa14.93□□□□□ -0.02
ACTN1-220ENST00000556433 RMI2Q96E14 147 aa14.93□□□□□ -0.02
ACTN1-220ENST00000556433 KLK12Q9UKR0 248 aa14.93□□□□□ -0.02
ACTN1-220ENST00000556433 FLG2Q5D862 2391 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-220ENST00000556433 DMBT1Q9UGM3 2413 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-220ENST00000556433 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-220ENST00000556433 TRBV10-1A0A0K0K1A3 114 aa14.92□□□□□ -0.02
ACTN1-220ENST00000556433 A0A1B0GV50 99 aa14.92□□□□□ -0.02
ACTN1-220ENST00000556433 RPL36AP83881 106 aaKnown RBP14.92□□□□□ -0.02
ACTN1-220ENST00000556433 KCNRGQ8N5I3 272 aa14.92□□□□□ -0.02
ACTN1-220ENST00000556433 FAM213BQ8TBF2 198 aa14.92□□□□□ -0.02
ACTN1-220ENST00000556433 MBD3L1Q8WWY6 194 aa14.92□□□□□ -0.02
ACTN1-220ENST00000556433 RPL36ALQ969Q0 106 aaKnown RBP14.92□□□□□ -0.02
ACTN1-220ENST00000556433 IGKV2D-24A0A075B6R9 120 aa14.91□□□□□ -0.02
ACTN1-220ENST00000556433 S100A9P06702 114 aaKnown RBP14.91□□□□□ -0.02
ACTN1-220ENST00000556433 DNAJC30Q96LL9 226 aa14.91□□□□□ -0.02
ACTN1-220ENST00000556433 TRBV7-3A0A075B6L6 115 aa14.9□□□□□ -0.02
ACTN1-220ENST00000556433 A0A087WX48 190 aa14.9□□□□□ -0.02
ACTN1-220ENST00000556433 UBE2D3P61077 147 aa14.9□□□□□ -0.02
ACTN1-220ENST00000556433 UBE2D2P62837 147 aa14.9□□□□□ -0.02
ACTN1-220ENST00000556433 UMAD1C9J7I0 102 aa14.89□□□□□ -0.03
ACTN1-220ENST00000556433 RPL19P84098 196 aaKnown RBP14.89□□□□□ -0.03
ACTN1-220ENST00000556433 ZNF345Q14585 488 aa14.89□□□□□ -0.03
ACTN1-220ENST00000556433 ELOBQ15370 118 aa14.89□□□□□ -0.03
ACTN1-220ENST00000556433 KCNIP4Q6PIL6 250 aa14.89□□□□□ -0.03
ACTN1-220ENST00000556433 BAGE2Q86Y30 109 aa14.89□□□□□ -0.03
ACTN1-220ENST00000556433 UBE2WQ96B02 151 aa14.89□□□□□ -0.03
ACTN1-220ENST00000556433 SCO2A0A1W2PP80 73 aa14.88□□□□□ -0.03
ACTN1-220ENST00000556433 PFDN1O60925 122 aa14.88□□□□□ -0.03
ACTN1-220ENST00000556433 Q8N976 141 aa14.88□□□□□ -0.03
ACTN1-220ENST00000556433 CHCHD7Q9BUK0 85 aa14.88□□□□□ -0.03
ACTN1-220ENST00000556433 SRRM2Q9UQ35 2752 aaKnown RBP14.88□□□□□ -0.03
ACTN1-220ENST00000556433 RAB4BP61018 213 aa14.87□□□□□ -0.03
ACTN1-220ENST00000556433 Q6ZSA8 131 aa14.87□□□□□ -0.03
ACTN1-220ENST00000556433 OR10AG1Q8NH19 301 aa14.87□□□□□ -0.03
ACTN1-220ENST00000556433 MLST8Q9BVC4 326 aa14.87□□□□□ -0.03
ACTN1-220ENST00000556433 ZNF471Q9BX82 626 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-220ENST00000556433 RBFOX3A6NFN3 312 aa14.86□□□□□ -0.03
ACTN1-220ENST00000556433 TMEM262E9PQX1 116 aa14.86□□□□□ -0.03
ACTN1-220ENST00000556433 ZNF56Q15929 161 aa14.86□□□□□ -0.03
ACTN1-220ENST00000556433 OR10G8Q8NGN5 311 aa14.86□□□□□ -0.03
ACTN1-220ENST00000556433 A0A0D9SG52 128 aa14.85□□□□□ -0.03
ACTN1-220ENST00000556433 HMSDA8MTL9 139 aa14.85□□□□□ -0.03
ACTN1-220ENST00000556433 CXCL1P09341 107 aa14.85□□□□□ -0.03
ACTN1-220ENST00000556433 LINC01620Q4KN68 170 aa14.85□□□□□ -0.03
ACTN1-220ENST00000556433 MUC21A0A0G2JKD1 596 aa14.84□□□□□ -0.03
ACTN1-220ENST00000556433 MUC21A0A140T8X8 626 aa14.84□□□□□ -0.03
ACTN1-220ENST00000556433 KANTRA0A1W2PQU2 76 aa14.84□□□□□ -0.03
ACTN1-220ENST00000556433 H2AFB1P0C5Y9 115 aa14.84□□□□□ -0.03
ACTN1-220ENST00000556433 TMUB2Q71RG4 321 aa14.84□□□□□ -0.03
ACTN1-220ENST00000556433 NEXN-AS1Q8NBZ9 246 aa14.84□□□□□ -0.03
ACTN1-220ENST00000556433 MYCBP2O75592 4640 aa14.83□□□□□ -0.04
ACTN1-220ENST00000556433 TRBV6-8A0A0A6YYG3 113 aa14.83□□□□□ -0.04
ACTN1-220ENST00000556433 BCL2L11O43521 198 aa14.83□□□□□ -0.04
ACTN1-220ENST00000556433 SSTP61278 116 aa14.83□□□□□ -0.04
ACTN1-220ENST00000556433 Q0VG73 95 aa14.83□□□□□ -0.04
ACTN1-220ENST00000556433 SPANXN1Q5VSR9 72 aa14.83□□□□□ -0.04
ACTN1-220ENST00000556433 PRR27Q6MZM9 219 aa14.83□□□□□ -0.04
ACTN1-220ENST00000556433 SSBP4Q9BWG4 385 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-220ENST00000556433 SNAI2O43623 268 aa14.82□□□□□ -0.04
ACTN1-220ENST00000556433 PLA2G1BP04054 148 aaKnown RBP14.82□□□□□ -0.04
ACTN1-220ENST00000556433 ATRAIDQ6UW56 229 aa14.82□□□□□ -0.04
ACTN1-220ENST00000556433 F5H697 171 aa14.81□□□□□ -0.04
ACTN1-220ENST00000556433 OR5AL1P0C617 328 aa14.81□□□□□ -0.04
ACTN1-220ENST00000556433 EIF5AP63241 154 aaKnown RBP14.81□□□□□ -0.04
ACTN1-220ENST00000556433 LINC00528Q8N1L1 170 aa14.81□□□□□ -0.04
ACTN1-220ENST00000556433 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-220ENST00000556433 RPL35P42766 123 aaKnown RBP14.79□□□□□ -0.04
ACTN1-220ENST00000556433 ENHOQ6UWT2 76 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms