RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SERTM2A0A1B0GWG4 89 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 CYCSP99999 105 aaKnown RBP8.87□□□□□ -0.99
ACTN1-219ENST00000556432 PIK3CD-AS1Q5SR53 167 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 PQLC2Q6ZP29 291 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 PRNTQ86SH4 94 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 SCGB1C1Q8TD33 95 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 C7orf33Q8WU49 177 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 PSG8Q9UQ74 426 aa8.87□□□□□ -0.99
ACTN1-219ENST00000556432 A0A087WWL8 130 aa8.86□□□□□ -0.99
ACTN1-219ENST00000556432 A0A1W2PPV4 95 aa8.86□□□□□ -0.99
ACTN1-219ENST00000556432 H3BVH4 76 aa8.86□□□□□ -0.99
ACTN1-219ENST00000556432 RPL36AP83881 106 aaKnown RBP8.86□□□□□ -0.99
ACTN1-219ENST00000556432 MPV17L2Q567V2 206 aa8.86□□□□□ -0.99
ACTN1-219ENST00000556432 Q5BKY6 102 aa8.86□□□□□ -0.99
ACTN1-219ENST00000556432 CLPSL2Q6UWE3 100 aa8.86□□□□□ -0.99
ACTN1-219ENST00000556432 RPL36ALQ969Q0 106 aaKnown RBP8.86□□□□□ -0.99
ACTN1-219ENST00000556432 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
ACTN1-219ENST00000556432 A0A087WYN8 130 aa8.85□□□□□ -0.99
ACTN1-219ENST00000556432 PHOX2AO14813 284 aa8.85□□□□□ -0.99
ACTN1-219ENST00000556432 HMGB3O15347 200 aaKnown RBP8.85□□□□□ -0.99
ACTN1-219ENST00000556432 TCRAP04437 139 aa8.85□□□□□ -0.99
ACTN1-219ENST00000556432 FLI1Q01543 452 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-219ENST00000556432 MIAQ16674 131 aa8.85□□□□□ -0.99
ACTN1-219ENST00000556432 C5orf17Q8NAS9 161 aa8.85□□□□□ -0.99
ACTN1-219ENST00000556432 CHCHD5Q9BSY4 110 aa8.85□□□□□ -0.99
ACTN1-219ENST00000556432 SMIM3Q9BZL3 60 aa8.85□□□□□ -0.99
ACTN1-219ENST00000556432 hDV102S1A0JD36 115 aa8.84□□□□□ -0.99
ACTN1-219ENST00000556432 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
ACTN1-219ENST00000556432 PET100P0DJ07 73 aa8.84□□□□□ -0.99
ACTN1-219ENST00000556432 OR11H4Q8NGC9 324 aa8.84□□□□□ -0.99
ACTN1-219ENST00000556432 HSPB11Q9Y547 144 aa8.84□□□□□ -0.99
ACTN1-219ENST00000556432 KIF25-AS1Q9Y6Z4 181 aa8.84□□□□□ -0.99
ACTN1-219ENST00000556432 TRBV7-3A0A075B6L6 115 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 TRBV6-8A0A0A6YYG3 113 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 IGKV3D-20A0A0C4DH25 116 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
ACTN1-219ENST00000556432 UBE2D3P61077 147 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 UBE2D2P62837 147 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
ACTN1-219ENST00000556432 RNF185Q96GF1 192 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 WFDC1Q9HC57 220 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 IL36BQ9NZH7 164 aa8.83□□□□□ -1
ACTN1-219ENST00000556432 TRBV10-1A0A0K0K1A3 114 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 B4DEV8 164 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 G3V3Q6 166 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 SMLR1H3BR10 107 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 GIPP09681 153 aaPredicted RBP8.82□□□□□ -1
ACTN1-219ENST00000556432 ARL14EPLP0DKL9 152 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 RAB2AP61019 212 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 PKIAP61925 76 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 SAPCD1Q5SSQ6 148 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 WDR73Q6P4I2 378 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 CLRN3Q8NCR9 226 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 GTSF1Q8WW33 167 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 AP5S1Q9NUS5 200 aa8.82□□□□□ -1
ACTN1-219ENST00000556432 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.81□□□□□ -1
ACTN1-219ENST00000556432 M0R036 132 aa8.81□□□□□ -1
ACTN1-219ENST00000556432 M0R381 172 aa8.81□□□□□ -1
ACTN1-219ENST00000556432 ARMS2P0C7Q2 107 aa8.81□□□□□ -1
ACTN1-219ENST00000556432 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.81□□□□□ -1
ACTN1-219ENST00000556432 SPACA4Q8TDM5 124 aa8.81□□□□□ -1
ACTN1-219ENST00000556432 PHLDA3Q9Y5J5 127 aa8.81□□□□□ -1
ACTN1-219ENST00000556432 FXYD6-FXYD2A0A087WZ82 144 aa8.8□□□□□ -1
ACTN1-219ENST00000556432 A0A0J9YXV3 536 aa8.8□□□□□ -1
ACTN1-219ENST00000556432 FABP5P3A8MUU1 101 aa8.8□□□□□ -1
ACTN1-219ENST00000556432 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
ACTN1-219ENST00000556432 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
ACTN1-219ENST00000556432 SFRP2Q96HF1 295 aa8.8□□□□□ -1
ACTN1-219ENST00000556432 IGLV10-54A0A075B6I4 117 aa8.79□□□□□ -1
ACTN1-219ENST00000556432 TRAV34A0A0B4J273 112 aa8.79□□□□□ -1
ACTN1-219ENST00000556432 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
ACTN1-219ENST00000556432 TPT1P13693 172 aaKnown RBP8.79□□□□□ -1
ACTN1-219ENST00000556432 SUMO1P63165 101 aaKnown RBP8.79□□□□□ -1
ACTN1-219ENST00000556432 PRR3P79522 188 aaKnown RBP8.79□□□□□ -1
ACTN1-219ENST00000556432 REG3GQ6UW15 175 aa8.79□□□□□ -1
ACTN1-219ENST00000556432 EPDR1Q9UM22 224 aa8.79□□□□□ -1
ACTN1-219ENST00000556432 AQP10Q96PS8 301 aa8.78□□□□□ -1
ACTN1-219ENST00000556432 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
ACTN1-219ENST00000556432 ARL2-SNX15V9GYD0 113 aa8.78□□□□□ -1
ACTN1-219ENST00000556432 GCHFRP30047 84 aa8.77□□□□□ -1.01
ACTN1-219ENST00000556432 CDC34P49427 236 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-219ENST00000556432 RBX1P62877 108 aa8.77□□□□□ -1.01
ACTN1-219ENST00000556432 GAGE6Q13070 117 aa8.77□□□□□ -1.01
ACTN1-219ENST00000556432 ZNF56Q15929 161 aa8.77□□□□□ -1.01
ACTN1-219ENST00000556432 KRTAP26-1Q6PEX3 210 aa8.77□□□□□ -1.01
ACTN1-219ENST00000556432 ZFP82Q8N141 532 aa8.77□□□□□ -1.01
ACTN1-219ENST00000556432 PRR34Q9NV39 138 aa8.77□□□□□ -1.01
ACTN1-219ENST00000556432 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
ACTN1-219ENST00000556432 KRBOX1C9JBD0 128 aa8.76□□□□□ -1.01
ACTN1-219ENST00000556432 MAJINQ3KP22 176 aa8.76□□□□□ -1.01
ACTN1-219ENST00000556432 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
ACTN1-219ENST00000556432 OR10G8Q8NGN5 311 aa8.76□□□□□ -1.01
ACTN1-219ENST00000556432 LYPD6BQ8NI32 183 aa8.76□□□□□ -1.01
ACTN1-219ENST00000556432 TNFSF18Q9UNG2 199 aa8.76□□□□□ -1.01
ACTN1-219ENST00000556432 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
ACTN1-219ENST00000556432 IFNA7P01567 189 aa8.75□□□□□ -1.01
ACTN1-219ENST00000556432 hCG_2014768A0A024R1R8 64 aa8.74□□□□□ -1.01
ACTN1-219ENST00000556432 ARPC5O15511 151 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 241.8 ms