RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SRP9P49458 86 aaKnown RBP-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 KLKP1Q107X0 134 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 Q5XG85 94 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 STX12Q86Y82 276 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 CDC26Q8NHZ8 85 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 DMAC1Q96GE9 116 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 LXNQ9BS40 222 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 GID8Q9NWU2 228 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 COMMD3Q9UBI1 195 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 MED31Q9Y3C7 131 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 SLIT1O75093 1534 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 TRRAPQ9Y4A5 3859 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 KIAA1549LQ6ZVL6 1849 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 ANK3Q12955 4377 aaKnown RBP-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 TET3O43151 1660 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 BLMP54132 1417 aaPredicted RBP-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 WDR97A6NE52 1622 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 TRAV13-1A0A0B4J241 112 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 LOC107984156A0A0G2JMH3 177 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 A0A1W2PRE2 83 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 TMEM189A5PLL7 270 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 H3BMG7 143 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 TPST1O60507 370 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 FAM107AO95990 144 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 CD3DP04234 171 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 SLC25A4P12235 298 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 GTF2A1P52655 376 aaPredicted RBP-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 RBM3P98179 157 aaKnown RBP-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 RHOHQ15669 191 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 TRIQKQ629K1 86 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 LYPD5Q6UWN5 251 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 HRCT1Q6UXD1 115 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 VMO1Q7Z5L0 202 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 ARL17AQ8IVW1 177 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 TEX29Q8N6K0 151 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 OR8J3Q8NGG0 315 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 OR51A4Q8NGJ6 313 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 THEM6Q8WUY1 208 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 NAT14Q8WUY8 206 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 CCDC32Q9BV29 185 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 TMEM14BQ9NUH8 114 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 ATPIF1Q9UII2 106 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 CPDO75976 1380 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 FAT2Q9NYQ8 4349 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 WNK2Q9Y3S1 2297 aa-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 CDK12Q9NYV4 1490 aaPredicted RBP-0.11□□□□□ -2.43
SCFD1-214ENST00000554819 PTPRGP23470 1445 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 RAPGEF6Q8TEU7 1601 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 CICQ96RK0 1608 aaPredicted RBP-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 A0A0G2JMM0 328 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 LOC107984640A0A0U1RRK4 108 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 E7EQ34 232 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 FXYD1O00168 92 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 PGRMC1O00264 195 aaKnown RBP-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 CDC42EP2O14613 210 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 EDF1O60869 148 aaKnown RBP-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 PFDN1O60925 122 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 IGKCP01834 107 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 SMR3BP02814 79 aaPredicted RBP-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 CRYGSP22914 178 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 ETV6P41212 452 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 POLR2HP52434 150 aaKnown RBP-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 BLCAPP62952 87 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 Q5BKY6 102 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 SMIM7Q9BQ49 75 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 PCBD2Q9H0N5 130 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 CBLN4Q9NTU7 201 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 AKAP9Q99996 3911 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 SMARCA2P51531 1590 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 DOPEY2Q9Y3R5 2298 aa-0.12□□□□□ -2.43
SCFD1-214ENST00000554819 DNAH10Q8IVF4 4471 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 KNL1Q8NG31 2342 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 A2MP01023 1474 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 SPINK1P00995 79 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 HBDP02042 147 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 MPC1LP0DKB6 136 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 G0S2P27469 103 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 GNG10P50151 68 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 IDO2Q6ZQW0 420 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 OR5A2Q8NGI9 324 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 OTOSQ8NHW6 89 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 ATG5Q9H1Y0 275 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 SMPXQ9UHP9 88 aa-0.13□□□□□ -2.43
SCFD1-214ENST00000554819 TRBV10-1A0A0K0K1A3 114 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 MCRIP1C9JLW8 97 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 CCKP06307 115 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 IL7P13232 177 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 RPL7P18124 248 aaKnown RBP-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 RPL22P35268 128 aaKnown RBP-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 LSM3P62310 102 aaKnown RBP-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 KRTAP19-8Q3LI54 63 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 TOMM20LQ6UXN7 152 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 OR4S1Q8NGB4 309 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 TRAPPC2LQ9UL33 140 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 223.5 ms