RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 C9orf47Q6ZRZ4 202 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 ZNF738Q8NE65 137 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 OR8A1Q8NGG7 326 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 OR1B1Q8NGR6 318 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 ATP6V0E2Q8NHE4 81 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 BAALCQ8WXS3 180 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 GPR82Q96P67 336 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 PYGO2Q9BRQ0 406 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 NPCDR1Q9BY65 106 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 MRPL36Q9P0J6 103 aaKnown RBP3.33□□□□□ -1.88
CKAP4-203ENST00000553039 PKHD1L1Q86WI1 4243 aa3.32□□□□□ -1.88
CKAP4-203ENST00000553039 RAB19A4D1S5 217 aa3.32□□□□□ -1.88
CKAP4-203ENST00000553039 PRAC2D3DTV9 90 aa3.32□□□□□ -1.88
CKAP4-203ENST00000553039 GPX4P36969 197 aaPredicted RBP3.32□□□□□ -1.88
CKAP4-203ENST00000553039 OR10J3Q5JRS4 329 aa3.32□□□□□ -1.88
CKAP4-203ENST00000553039 UQCC3Q6UW78 93 aa3.32□□□□□ -1.88
CKAP4-203ENST00000553039 EIF4E3Q8N5X7 224 aaKnown RBP3.32□□□□□ -1.88
CKAP4-203ENST00000553039 SLC35E1Q96K37 410 aa3.32□□□□□ -1.88
CKAP4-203ENST00000553039 NPVFQ9HCQ7 196 aa3.32□□□□□ -1.88
CKAP4-203ENST00000553039 TRBV7-9A0A0J9YWB2 115 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 ZFP92A6NM28 416 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 GGTLC3B5MD39 225 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 KRBOX1C9JBD0 128 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 CIDEAO60543 219 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 IGHV3-53P01767 116 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 PFN1P07737 140 aaKnown RBP3.31□□□□□ -1.88
CKAP4-203ENST00000553039 LINC00242Q5T6M2 205 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 OR10G4Q8NGN3 311 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 OR10G9Q8NGN4 311 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 OR10G7Q8NGN6 311 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 LYPD6BQ8NI32 183 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 ACY3Q96HD9 319 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 MGST2Q99735 147 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 VGLL1Q99990 258 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 PXMP4Q9Y6I8 212 aa3.31□□□□□ -1.88
CKAP4-203ENST00000553039 TRAV1-1A0A0B4J248 108 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 CTXND1A0A1B0GTU2 59 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 A0A1W2PPV4 95 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 MAP1LC3B2A6NCE7 125 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 AGPAT2O15120 278 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 SPINK4O60575 86 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 IFNA1P01562 189 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 IGHV3-30P01768 117 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 IGHV3-33P01772 117 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 IGHV3-30-3P0DP02 117 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 IGHV3-30-5P0DP03 117 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 RPL29P47914 159 aaKnown RBP3.3□□□□□ -1.88
CKAP4-203ENST00000553039 CDC34P49427 236 aaPredicted RBP3.3□□□□□ -1.88
CKAP4-203ENST00000553039 LYZP61626 148 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 WFDC2Q14508 124 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 PEA15Q15121 130 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 KRTAP15-1Q3LI76 137 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 S100A7AQ86SG5 101 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 STPG4Q8N801 248 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 SFT2D1Q8WV19 159 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 FAM210AQ96ND0 272 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 ACTR3CQ9C0K3 210 aaPredicted RBP3.3□□□□□ -1.88
CKAP4-203ENST00000553039 MAP1LC3BQ9GZQ8 125 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 SMDT1Q9H4I9 107 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 SLC25A22Q9H936 323 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 VAX2Q9UIW0 290 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 RNF24Q9Y225 148 aa3.3□□□□□ -1.88
CKAP4-203ENST00000553039 TRAV12-3A0A0B4J271 114 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 A0A1B0GV50 99 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 RPL7P18124 248 aaKnown RBP3.29□□□□□ -1.88
CKAP4-203ENST00000553039 GATA2P23769 480 aaPredicted RBP3.29□□□□□ -1.88
CKAP4-203ENST00000553039 LEPP41159 167 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 SELENOTP62341 195 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 GUK1Q16774 197 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 XP32Q5T750 250 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 MIC13Q5XKP0 118 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 SPINK6Q6UWN8 80 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 LCN15Q6UWW0 184 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 CYP2G1PQ6ZSU1 146 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 LINC01561Q8N1V8 128 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 RNF182Q8N6D2 247 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 MBD3L1Q8WWY6 194 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 RPUSD4Q96CM3 377 aaKnown RBP3.29□□□□□ -1.88
CKAP4-203ENST00000553039 ZC2HC1AQ96GY0 325 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 PFDN5Q99471 154 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 TRGV9Q99603 122 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 EIF5A2Q9GZV4 153 aaKnown RBP3.29□□□□□ -1.88
CKAP4-203ENST00000553039 TREM1Q9NP99 234 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 MANBALQ9NQG1 85 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 SLC39A9Q9NUM3 307 aa3.29□□□□□ -1.88
CKAP4-203ENST00000553039 IGKV1OR2-108A0A075B7D4 117 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 TRAV8-2A0A0B4J237 113 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 FAM231BA6NCW3 169 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 COX7A2P2O60397 106 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 CXorf1O96002 111 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 PRSS1P07477 247 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 SFTA3P0C7M3 94 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 LINC00869P0C866 280 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 BCL2P10415 239 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 TCL1AP56279 114 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 TAS2R45P59539 299 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms