RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SUMO4Q6EEV6 95 aa12.27□□□□□ -0.44
RBFOX1-212ENST00000550418 C3orf56Q8N813 242 aa12.27□□□□□ -0.44
RBFOX1-212ENST00000550418 C11orf86A6NJI1 115 aa12.27□□□□□ -0.44
RBFOX1-212ENST00000550418 TM2D2Q9BX73 214 aa12.27□□□□□ -0.44
RBFOX1-212ENST00000550418 A0A0B4J2C4 111 aa12.27□□□□□ -0.45
RBFOX1-212ENST00000550418 H3BT86 120 aa12.27□□□□□ -0.45
RBFOX1-212ENST00000550418 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
RBFOX1-212ENST00000550418 PIFOQ8TCI5 191 aa12.27□□□□□ -0.45
RBFOX1-212ENST00000550418 BUB3O43684 328 aa12.27□□□□□ -0.45
RBFOX1-212ENST00000550418 C5orf42Q9H799 3197 aa12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 A0A1W2PNU3 283 aaPredicted RBP12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 ZNF106Q9H2Y7 1883 aaKnown RBP12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 PRAC2D3DTV9 90 aa12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 RBM3P98179 157 aaKnown RBP12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 IGKV1D-37A0A075B6S9 117 aa12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 CRYGCP07315 174 aa12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 SONP18583 2426 aaKnown RBP12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 RPL39P62891 51 aaKnown RBP12.26□□□□□ -0.45
RBFOX1-212ENST00000550418 WI2-2373I1.2A0A1W2PRP0 233 aa12.25□□□□□ -0.45
RBFOX1-212ENST00000550418 IGLV2-23P01705 113 aa12.25□□□□□ -0.45
RBFOX1-212ENST00000550418 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
RBFOX1-212ENST00000550418 A0A1B0GX51 115 aa12.25□□□□□ -0.45
RBFOX1-212ENST00000550418 DEFB130BP0DP73 79 aa12.25□□□□□ -0.45
RBFOX1-212ENST00000550418 DEFB130AP0DP74 79 aa12.25□□□□□ -0.45
RBFOX1-212ENST00000550418 TIMM17AQ99595 171 aa12.25□□□□□ -0.45
RBFOX1-212ENST00000550418 CHD8Q9HCK8 2581 aa12.24□□□□□ -0.45
RBFOX1-212ENST00000550418 TCL1BO95988 128 aa12.24□□□□□ -0.45
RBFOX1-212ENST00000550418 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.24□□□□□ -0.45
RBFOX1-212ENST00000550418 IGKV2-29A2NJV5 120 aaPredicted RBP12.24□□□□□ -0.45
RBFOX1-212ENST00000550418 TEX22C9J3V5 150 aa12.24□□□□□ -0.45
RBFOX1-212ENST00000550418 DSCR8Q96T75 97 aa12.24□□□□□ -0.45
RBFOX1-212ENST00000550418 LAMA3Q16787 3333 aa12.23□□□□□ -0.45
RBFOX1-212ENST00000550418 WNK1Q9H4A3 2382 aa12.23□□□□□ -0.45
RBFOX1-212ENST00000550418 IGFL3Q6UXB1 125 aa12.23□□□□□ -0.45
RBFOX1-212ENST00000550418 MED12LQ86YW9 2145 aa12.23□□□□□ -0.45
RBFOX1-212ENST00000550418 NDUFV3P56181 108 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-212ENST00000550418 MRAPQ8TCY5 172 aa12.23□□□□□ -0.45
RBFOX1-212ENST00000550418 ORMDL1Q9P0S3 153 aa12.22□□□□□ -0.45
RBFOX1-212ENST00000550418 NPBQ8NG41 125 aa12.22□□□□□ -0.45
RBFOX1-212ENST00000550418 IGKV3D-7A0A0C4DH55 119 aa12.22□□□□□ -0.45
RBFOX1-212ENST00000550418 HERV-K104P63124 156 aa12.22□□□□□ -0.45
RBFOX1-212ENST00000550418 PRB1P04280 392 aa12.22□□□□□ -0.45
RBFOX1-212ENST00000550418 KIAA1549LQ6ZVL6 1849 aa12.22□□□□□ -0.45
RBFOX1-212ENST00000550418 CFHR3Q02985 330 aa12.21□□□□□ -0.45
RBFOX1-212ENST00000550418 CHD7Q9P2D1 2997 aa12.21□□□□□ -0.45
RBFOX1-212ENST00000550418 PRRC2CQ9Y520 2896 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-212ENST00000550418 IGHV7-81A0A0B4J1V7 117 aa12.21□□□□□ -0.45
RBFOX1-212ENST00000550418 IGFBPL1Q8WX77 278 aa12.21□□□□□ -0.45
RBFOX1-212ENST00000550418 TMEM258P61165 79 aa12.21□□□□□ -0.46
RBFOX1-212ENST00000550418 SLC25A29Q8N8R3 303 aa12.21□□□□□ -0.46
RBFOX1-212ENST00000550418 LGALS9O00182 355 aa12.2□□□□□ -0.46
RBFOX1-212ENST00000550418 Q8N1Y9 231 aa12.2□□□□□ -0.46
RBFOX1-212ENST00000550418 C9orf47Q6ZRZ4 202 aa12.2□□□□□ -0.46
RBFOX1-212ENST00000550418 LAMA2P24043 3122 aaKnown RBP12.2□□□□□ -0.46
RBFOX1-212ENST00000550418 H0YGX0 51 aa12.2□□□□□ -0.46
RBFOX1-212ENST00000550418 CLEC2BQ92478 149 aa12.2□□□□□ -0.46
RBFOX1-212ENST00000550418 C1orf43Q9BWL3 253 aa12.2□□□□□ -0.46
RBFOX1-212ENST00000550418 C2orf91Q6ZV80 131 aa12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 PTPRSQ13332 1948 aa12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 IGKV2D-26A0A0A0MRZ7 120 aa12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 HOXD3P31249 432 aaPredicted RBP12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 WISP2O76076 250 aa12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 F8WEM9 126 aa12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 LINC00310P59036 64 aa12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 EIF4EBP1Q13541 118 aaPredicted RBP12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
RBFOX1-212ENST00000550418 MRPL23Q16540 153 aaKnown RBP12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 C2CD3Q4AC94 2353 aa12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 DAND5Q8N907 189 aa12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 SPTBN4Q9H254 2564 aa12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 H3BUA1 57 aa12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 IGLV1-47P01700 117 aa12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 MSMBP08118 114 aa12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
RBFOX1-212ENST00000550418 NSUN5P1Q3KNT7 163 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 Q71RC1 249 aaPredicted RBP12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 SND1-IT1Q9HBX3 110 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 NCKAP5O14513 1909 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 CGB3P0DN86 165 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 CGB7P0DN87 165 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 IGLC6P0CF74 106 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 LINC00643Q86TS7 51 aa12.17□□□□□ -0.46
RBFOX1-212ENST00000550418 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
RBFOX1-212ENST00000550418 ANKRD11Q6UB99 2663 aaPredicted RBP12.16□□□□□ -0.46
RBFOX1-212ENST00000550418 LINC01619G3V211 115 aa12.15□□□□□ -0.46
RBFOX1-212ENST00000550418 DKK4Q9UBT3 224 aa12.15□□□□□ -0.46
RBFOX1-212ENST00000550418 TRAV25A0A0B4J276 109 aa12.15□□□□□ -0.46
RBFOX1-212ENST00000550418 CENPVL3A0A0U1RRI6 287 aa12.15□□□□□ -0.46
RBFOX1-212ENST00000550418 MAPKAPK5-AS1Q8N8E1 139 aa12.15□□□□□ -0.46
RBFOX1-212ENST00000550418 ATP5G1P05496 136 aa12.14□□□□□ -0.47
RBFOX1-212ENST00000550418 HOXB4P17483 251 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-212ENST00000550418 Q8N976 141 aa12.14□□□□□ -0.47
RBFOX1-212ENST00000550418 U3KQE9 123 aa12.14□□□□□ -0.47
RBFOX1-212ENST00000550418 SPRY4Q9C004 299 aa12.13□□□□□ -0.47
RBFOX1-212ENST00000550418 TEX49A0A1B0GTD5 131 aa12.13□□□□□ -0.47
RBFOX1-212ENST00000550418 RNF223E7ERA6 249 aa12.13□□□□□ -0.47
RBFOX1-212ENST00000550418 CRYGBP07316 175 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms