RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 C14orf178Q8N769 122 aaPredicted RBP11.72□□□□□ -0.53
CHMP1A-208ENST00000550102 OR10AG1Q8NH19 301 aa11.72□□□□□ -0.53
CHMP1A-208ENST00000550102 TRBV20OR9-2A0A075B6H5 130 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 RAB19A4D1S5 217 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 GAGE12JA6NER3 117 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 SNAI2O43623 268 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 IGLV2-8P01709 118 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 OR5AL1P0C617 328 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 GAGE1Q13065 139 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 GAGE4Q13068 117 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 GAGE5Q13069 117 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 GAGE13Q4V321 117 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 OR10J3Q5JRS4 329 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 LELP1Q5T871 98 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 NFE4Q86UQ8 179 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.53
CHMP1A-208ENST00000550102 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
CHMP1A-208ENST00000550102 CRYGDP07320 174 aa11.7□□□□□ -0.54
CHMP1A-208ENST00000550102 SPANXN1Q5VSR9 72 aa11.7□□□□□ -0.54
CHMP1A-208ENST00000550102 Q6ZRN7 208 aaPredicted RBP11.7□□□□□ -0.54
CHMP1A-208ENST00000550102 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
CHMP1A-208ENST00000550102 MSRB1Q9NZV6 116 aa11.7□□□□□ -0.54
CHMP1A-208ENST00000550102 RPS20P60866 119 aaKnown RBP11.69□□□□□ -0.54
CHMP1A-208ENST00000550102 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
CHMP1A-208ENST00000550102 OR2D3Q8NGH3 330 aa11.69□□□□□ -0.54
CHMP1A-208ENST00000550102 SSBP4Q9BWG4 385 aaPredicted RBP11.69□□□□□ -0.54
CHMP1A-208ENST00000550102 C19orf71A6NCJ1 209 aa11.68□□□□□ -0.54
CHMP1A-208ENST00000550102 P01737 135 aa11.68□□□□□ -0.54
CHMP1A-208ENST00000550102 MUC21A0A0G2JKD1 596 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 TRBV10-1A0A0K0K1A3 114 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 MUC21A0A140T8X8 626 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 XKRY2A2RUG3 117 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 ZNF56Q15929 161 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 LYPD6BQ8NI32 183 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 AP1S3Q96PC3 154 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 Q9UF83 564 aa11.67□□□□□ -0.54
CHMP1A-208ENST00000550102 A0A087WWC5 75 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 RBFOX3A6NFN3 312 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 C16orf90A8MZG2 172 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 TMEM250H0YL14 139 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 GZMBP10144 247 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 RAB4BP61018 213 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
CHMP1A-208ENST00000550102 IGLC6P0CF74 106 aa11.65□□□□□ -0.54
CHMP1A-208ENST00000550102 ERVFC1-1P60608 527 aa11.65□□□□□ -0.54
CHMP1A-208ENST00000550102 RPL36AP83881 106 aaKnown RBP11.65□□□□□ -0.54
CHMP1A-208ENST00000550102 SPATA12Q7Z6I5 190 aa11.65□□□□□ -0.54
CHMP1A-208ENST00000550102 RPL36ALQ969Q0 106 aaKnown RBP11.65□□□□□ -0.54
CHMP1A-208ENST00000550102 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
CHMP1A-208ENST00000550102 DNAH11Q96DT5 4516 aa11.65□□□□□ -0.55
CHMP1A-208ENST00000550102 SMIM17P0DL12 118 aa11.64□□□□□ -0.55
CHMP1A-208ENST00000550102 SSTP61278 116 aa11.64□□□□□ -0.55
CHMP1A-208ENST00000550102 KIAA1109Q2LD37 5005 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 TRBV7-3A0A075B6L6 115 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 EREGO14944 169 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 IGHV3-30P01768 117 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 IGHV3-33P01772 117 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 IGHV3-30-3P0DP02 117 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 IGHV3-30-5P0DP03 117 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 CACNG7P62955 275 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 TOR2AQ5JU69 321 aa11.63□□□□□ -0.55
CHMP1A-208ENST00000550102 HERC2O95714 4834 aa11.62□□□□□ -0.55
CHMP1A-208ENST00000550102 F2Z2F3 143 aa11.62□□□□□ -0.55
CHMP1A-208ENST00000550102 OR10G8Q8NGN5 311 aa11.62□□□□□ -0.55
CHMP1A-208ENST00000550102 RPP21Q9H633 154 aaKnown RBP11.62□□□□□ -0.55
CHMP1A-208ENST00000550102 IBA57-AS1B1ANH7 110 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 F5H697 171 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 K7EN84 100 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 CTRLP40313 264 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 CEBPGP53567 150 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 UBE2D3P61077 147 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 UBE2D2P62837 147 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 LAGE3Q14657 143 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 NUDT10Q8NFP7 164 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 NUDT11Q96G61 164 aa11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 EIF5A2Q9GZV4 153 aaKnown RBP11.61□□□□□ -0.55
CHMP1A-208ENST00000550102 DYNC1H1Q14204 4646 aaKnown RBP11.6□□□□□ -0.55
CHMP1A-208ENST00000550102 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
CHMP1A-208ENST00000550102 RNASE7Q9H1E1 156 aaKnown RBP11.6□□□□□ -0.55
CHMP1A-208ENST00000550102 Q9HAA7 133 aa11.6□□□□□ -0.55
CHMP1A-208ENST00000550102 KIF25-AS1Q9Y6Z4 181 aa11.6□□□□□ -0.55
CHMP1A-208ENST00000550102 NDUFS6O75380 124 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-208ENST00000550102 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
CHMP1A-208ENST00000550102 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
CHMP1A-208ENST00000550102 Q8N3U1 123 aa11.59□□□□□ -0.55
CHMP1A-208ENST00000550102 NEXN-AS1Q8NBZ9 246 aa11.59□□□□□ -0.55
CHMP1A-208ENST00000550102 FAM210AQ96ND0 272 aa11.59□□□□□ -0.55
CHMP1A-208ENST00000550102 URGCP-MRPS24S4R325 110 aa11.59□□□□□ -0.55
CHMP1A-208ENST00000550102 PSCAO43653 123 aa11.58□□□□□ -0.56
CHMP1A-208ENST00000550102 MGPP08493 103 aa11.58□□□□□ -0.56
CHMP1A-208ENST00000550102 TRGC1P0CF51 173 aa11.58□□□□□ -0.56
CHMP1A-208ENST00000550102 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.58□□□□□ -0.56
CHMP1A-208ENST00000550102 SMIM7Q9BQ49 75 aa11.58□□□□□ -0.56
CHMP1A-208ENST00000550102 A0A087WTM6 91 aa11.57□□□□□ -0.56
CHMP1A-208ENST00000550102 H7C1H1 209 aa11.56□□□□□ -0.56
CHMP1A-208ENST00000550102 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
CHMP1A-208ENST00000550102 NIT1Q86X76 327 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms