RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ZFP82Q8N141 532 aa10.81□□□□□ -0.68
CHMP1A-206ENST00000549139 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
CHMP1A-206ENST00000549139 PCNPQ8WW12 178 aaKnown RBP10.81□□□□□ -0.68
CHMP1A-206ENST00000549139 MRPS16Q9Y3D3 137 aaKnown RBP10.81□□□□□ -0.68
CHMP1A-206ENST00000549139 IGHV3-73A0A0B4J1V6 119 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 NBDYA0A0U1RRE5 68 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 OR5AL1P0C617 328 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 SRIP30626 198 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 RPS20P60866 119 aaKnown RBP10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 UFSP1Q6NVU6 142 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 LYPD5Q6UWN5 251 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 C6orf223Q8N319 242 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 OCC1Q8TAD7 63 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 SFRP2Q96HF1 295 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 Q9H8V8 135 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 JPT2Q9H910 190 aa10.8□□□□□ -0.68
CHMP1A-206ENST00000549139 M0R381 172 aa10.79□□□□□ -0.68
CHMP1A-206ENST00000549139 RHOHQ15669 191 aa10.79□□□□□ -0.68
CHMP1A-206ENST00000549139 SH2D6Q7Z4S9 175 aa10.79□□□□□ -0.68
CHMP1A-206ENST00000549139 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
CHMP1A-206ENST00000549139 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
CHMP1A-206ENST00000549139 RHODO00212 210 aa10.78□□□□□ -0.68
CHMP1A-206ENST00000549139 P01737 135 aa10.78□□□□□ -0.68
CHMP1A-206ENST00000549139 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 XKRY2A2RUG3 117 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 NXPH4O95158 308 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 CRYGDP07320 174 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 SRP19P09132 144 aaKnown RBP10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 SPATA12Q7Z6I5 190 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 NUDT10Q8NFP7 164 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 NUDT11Q96G61 164 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 LY96Q9Y6Y9 160 aa10.77□□□□□ -0.69
CHMP1A-206ENST00000549139 K7EN84 100 aa10.76□□□□□ -0.69
CHMP1A-206ENST00000549139 IGLC6P0CF74 106 aa10.76□□□□□ -0.69
CHMP1A-206ENST00000549139 Q6ZSN1 163 aa10.76□□□□□ -0.69
CHMP1A-206ENST00000549139 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
CHMP1A-206ENST00000549139 CEBPGP53567 150 aa10.75□□□□□ -0.69
CHMP1A-206ENST00000549139 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
CHMP1A-206ENST00000549139 FER1L6-AS1Q8NA97 138 aa10.75□□□□□ -0.69
CHMP1A-206ENST00000549139 A0A087WWL8 130 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 F2Z2F3 143 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 GZMBP10144 247 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 TIRAPP58753 221 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 KRTAP10-2P60368 255 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 FAM74A4Q5TZK3 123 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 SMIM7Q9BQ49 75 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
CHMP1A-206ENST00000549139 A0A1W2PPQ1 181 aa10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 ZNF727A8MUV8 499 aa10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 SIVA1O15304 175 aa10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 CACNG7P62955 275 aa10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 PEA15Q15121 130 aa10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 FAM231DQ6ZW35 169 aa10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 RNASE7Q9H1E1 156 aaKnown RBP10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 RPP21Q9H633 154 aaKnown RBP10.73□□□□□ -0.69
CHMP1A-206ENST00000549139 MUC21A0A0G2JKD1 596 aa10.72□□□□□ -0.69
CHMP1A-206ENST00000549139 MUC21A0A140T8X8 626 aa10.72□□□□□ -0.69
CHMP1A-206ENST00000549139 EPM2AB3EWF7 344 aa10.72□□□□□ -0.69
CHMP1A-206ENST00000549139 TTC32Q5I0X7 151 aa10.72□□□□□ -0.69
CHMP1A-206ENST00000549139 C14orf178Q8N769 122 aaPredicted RBP10.72□□□□□ -0.69
CHMP1A-206ENST00000549139 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
CHMP1A-206ENST00000549139 INAFM2P0DMQ5 153 aa10.71□□□□□ -0.69
CHMP1A-206ENST00000549139 RAB4BP61018 213 aa10.71□□□□□ -0.69
CHMP1A-206ENST00000549139 FAM74A3Q4VXF1 159 aa10.71□□□□□ -0.69
CHMP1A-206ENST00000549139 WDR73Q6P4I2 378 aa10.71□□□□□ -0.69
CHMP1A-206ENST00000549139 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
CHMP1A-206ENST00000549139 VPS13BQ7Z7G8 4022 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 TRBV10-1A0A0K0K1A3 114 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 C9JQL5 133 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 GATCO43716 136 aaKnown RBP10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 LINC00694P0DN24 101 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 SSTP61278 116 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 GAGE1Q13065 139 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 GAGE4Q13068 117 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 GAGE5Q13069 117 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 LINC01551Q86U37 167 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 TPPP3Q9BW30 176 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 GTSF1LQ9H1H1 148 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 Q9UF83 564 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 KIF25-AS1Q9Y6Z4 181 aa10.7□□□□□ -0.7
CHMP1A-206ENST00000549139 SMIM17P0DL12 118 aa10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 ERVFC1-1P60608 527 aa10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 SRSF3P84103 164 aaKnown RBP10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 TMEM241Q24JQ0 296 aa10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 AP1S3Q96PC3 154 aa10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 KRTAP1-5Q9BYS1 174 aa10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
CHMP1A-206ENST00000549139 A8MWL6 223 aa10.68□□□□□ -0.7
CHMP1A-206ENST00000549139 NTF3P20783 257 aa10.68□□□□□ -0.7
CHMP1A-206ENST00000549139 CTRLP40313 264 aa10.68□□□□□ -0.7
CHMP1A-206ENST00000549139 RAB14P61106 215 aa10.68□□□□□ -0.7
CHMP1A-206ENST00000549139 CT83Q5H943 113 aa10.68□□□□□ -0.7
CHMP1A-206ENST00000549139 K7EP13 123 aa10.67□□□□□ -0.7
CHMP1A-206ENST00000549139 TRGC1P0CF51 173 aa10.67□□□□□ -0.7
CHMP1A-206ENST00000549139 FOXA3P55318 350 aaPredicted RBP10.67□□□□□ -0.7
CHMP1A-206ENST00000549139 LINC00315P59091 139 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms