RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 OCIAD2Q56VL3 154 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 OR9G4Q8NGQ1 327 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 HIST2H2BCQ6DN03 193 aa10.28□□□□□ -0.76
PRPF40B-209ENST00000548825 OR1N2Q8NGR9 330 aa10.28□□□□□ -0.76
PRPF40B-209ENST00000548825 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
PRPF40B-209ENST00000548825 C9orf118A6NHY6 69 aa10.27□□□□□ -0.76
PRPF40B-209ENST00000548825 RNASE3P12724 160 aaKnown RBP10.27□□□□□ -0.76
PRPF40B-209ENST00000548825 KRTAP10-9P60411 292 aa10.27□□□□□ -0.76
PRPF40B-209ENST00000548825 SNRPD3P62318 126 aaKnown RBP10.27□□□□□ -0.76
PRPF40B-209ENST00000548825 U3KQE9 123 aa10.27□□□□□ -0.76
PRPF40B-209ENST00000548825 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 ZNF815PA8K554 130 aa10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 ADAMTSL5Q6ZMM2 481 aa10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 HOXA3O43365 443 aaPredicted RBP10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 SLURP1P55000 103 aa10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 CNFNQ9BYD5 112 aa10.27□□□□□ -0.77
PRPF40B-209ENST00000548825 SLC25A16P16260 332 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 RBX1P62877 108 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 CFAP161Q6P656 301 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 IGHV4OR15-8A0A075B7B6 117 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 A0A087WW49 117 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 P0DMU3 169 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 FAM231AP0DMU4 169 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 FAM231CP0DMU5 169 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 KIR2DL4Q99706 377 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 APCP25054 2843 aa10.26□□□□□ -0.77
PRPF40B-209ENST00000548825 A0A087WX48 190 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 COX6B1P14854 86 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 ZNF876PQ49A33 203 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 H7C1H1 209 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 DEFB131AP59861 70 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 COX8CQ7Z4L0 72 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 Q8N1Y9 231 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 IGHV3-16A0A0C4DH30 117 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 ORMDL2Q53FV1 153 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 SUMO4Q6EEV6 95 aa10.25□□□□□ -0.77
PRPF40B-209ENST00000548825 H3BRM9 83 aa10.24□□□□□ -0.77
PRPF40B-209ENST00000548825 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
PRPF40B-209ENST00000548825 F8VRH5 84 aa10.24□□□□□ -0.77
PRPF40B-209ENST00000548825 H3BMG7 143 aa10.24□□□□□ -0.77
PRPF40B-209ENST00000548825 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 K7ERU9 68 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 PROK1P58294 105 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 TCTEX1D4Q5JR98 221 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 APRG1Q8IVJ8 170 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 MRAP2Q96G30 205 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
PRPF40B-209ENST00000548825 IGHV3-38A0A0C4DH36 116 aa10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 SOCS3O14543 225 aa10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 NPC2P61916 151 aa10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 CEND1Q8N111 149 aa10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 LINC01356Q8N9X3 169 aa10.22□□□□□ -0.77
PRPF40B-209ENST00000548825 PLNP26678 52 aa10.21□□□□□ -0.77
PRPF40B-209ENST00000548825 PHLDA1Q8WV24 401 aaPredicted RBP10.21□□□□□ -0.77
PRPF40B-209ENST00000548825 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.77
PRPF40B-209ENST00000548825 MRPL16Q9NX20 251 aaKnown RBP10.21□□□□□ -0.77
PRPF40B-209ENST00000548825 NDUFS8O00217 210 aa10.21□□□□□ -0.78
PRPF40B-209ENST00000548825 ZNF418Q8TF45 676 aaPredicted RBP10.21□□□□□ -0.78
PRPF40B-209ENST00000548825 SH2D6Q7Z4S9 175 aa10.2□□□□□ -0.78
PRPF40B-209ENST00000548825 DCANP1Q8TF63 244 aa10.2□□□□□ -0.78
PRPF40B-209ENST00000548825 UBE2E2Q96LR5 201 aa10.2□□□□□ -0.78
PRPF40B-209ENST00000548825 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
PRPF40B-209ENST00000548825 K7EP34 96 aa10.2□□□□□ -0.78
PRPF40B-209ENST00000548825 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
PRPF40B-209ENST00000548825 BBC3Q96PG8 261 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-209ENST00000548825 SRSF2Q01130 221 aaKnown RBP10.19□□□□□ -0.78
PRPF40B-209ENST00000548825 ETDBQ3ZM63 59 aa10.19□□□□□ -0.78
PRPF40B-209ENST00000548825 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
PRPF40B-209ENST00000548825 CDKN1BP46527 198 aa10.19□□□□□ -0.78
PRPF40B-209ENST00000548825 MYMXA0A1B0GTQ4 84 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 IGLV1-40P01703 118 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 IGHV3-53P01767 116 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 C19orf54Q5BKX5 351 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 ZFP2Q6ZN57 461 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 Q96MF0 132 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 Q9UF83 564 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 PRSS2P07478 247 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 PSMB8P28062 276 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 WFDC2Q14508 124 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 C12orf74Q32Q52 190 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 SCGB1C2P0DMR2 95 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 Q5PR19 223 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 XCL2Q9UBD3 114 aa10.18□□□□□ -0.78
PRPF40B-209ENST00000548825 TOMM6Q96B49 74 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 LENEPQ9Y5L5 61 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 IGHV1OR15-1A0A075B7D0 117 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms