RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 GSN-AS1Q9NRJ2 163 aa12.47□□□□□ -0.41
HDAC7-227ENST00000548080 EVI2AP22794 236 aa12.46□□□□□ -0.41
HDAC7-227ENST00000548080 AMN1Q8IY45 258 aa12.46□□□□□ -0.41
HDAC7-227ENST00000548080 SPXQ9BT56 116 aa12.46□□□□□ -0.41
HDAC7-227ENST00000548080 CSMD3Q7Z407 3707 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 M0R2P5 195 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 S100A6P06703 90 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 ZNF876PQ49A33 203 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 IL17DQ8TAD2 202 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 TMEM263Q8WUH6 116 aaKnown RBP12.45□□□□□ -0.42
HDAC7-227ENST00000548080 PTH2Q96A98 100 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 RNF185Q96GF1 192 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 AP1S3Q96PC3 154 aa12.45□□□□□ -0.42
HDAC7-227ENST00000548080 MIFP14174 115 aa12.44□□□□□ -0.42
HDAC7-227ENST00000548080 RAB4AP20338 218 aa12.44□□□□□ -0.42
HDAC7-227ENST00000548080 SRIP30626 198 aa12.44□□□□□ -0.42
HDAC7-227ENST00000548080 NDUFA6P56556 154 aa12.44□□□□□ -0.42
HDAC7-227ENST00000548080 RRN3P1Q2M238 152 aa12.44□□□□□ -0.42
HDAC7-227ENST00000548080 MRPL51Q4U2R6 128 aaKnown RBP12.44□□□□□ -0.42
HDAC7-227ENST00000548080 RNASE8Q8TDE3 154 aaKnown RBP12.44□□□□□ -0.42
HDAC7-227ENST00000548080 ALKBH7Q9BT30 221 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-227ENST00000548080 EMP1P54849 157 aa12.43□□□□□ -0.42
HDAC7-227ENST00000548080 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
HDAC7-227ENST00000548080 C14orf178Q8N769 122 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-227ENST00000548080 C16orf74Q96GX8 76 aa12.43□□□□□ -0.42
HDAC7-227ENST00000548080 C11orf68Q9H3H3 251 aaKnown RBP12.43□□□□□ -0.42
HDAC7-227ENST00000548080 DPH3P1Q9H4G8 78 aa12.43□□□□□ -0.42
HDAC7-227ENST00000548080 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
HDAC7-227ENST00000548080 CELA1Q9UNI1 258 aa12.42□□□□□ -0.42
HDAC7-227ENST00000548080 STARD9Q9P2P6 4700 aa12.42□□□□□ -0.42
HDAC7-227ENST00000548080 SMIM17P0DL12 118 aa12.41□□□□□ -0.42
HDAC7-227ENST00000548080 JPT2Q9H910 190 aa12.41□□□□□ -0.42
HDAC7-227ENST00000548080 KIF25-AS1Q9Y6Z4 181 aa12.41□□□□□ -0.42
HDAC7-227ENST00000548080 SMIM9A6NGZ8 99 aa12.4□□□□□ -0.42
HDAC7-227ENST00000548080 PPBPP02775 128 aa12.4□□□□□ -0.42
HDAC7-227ENST00000548080 CKS2P33552 79 aa12.4□□□□□ -0.42
HDAC7-227ENST00000548080 Q0VG73 95 aa12.4□□□□□ -0.42
HDAC7-227ENST00000548080 ORMDL3Q8N138 153 aa12.4□□□□□ -0.42
HDAC7-227ENST00000548080 D6R8Y8 96 aa12.4□□□□□ -0.43
HDAC7-227ENST00000548080 C3orf84H3BNL1 204 aa12.4□□□□□ -0.43
HDAC7-227ENST00000548080 SNRPEP62304 92 aaKnown RBP12.4□□□□□ -0.43
HDAC7-227ENST00000548080 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.43
HDAC7-227ENST00000548080 OR10J3Q5JRS4 329 aa12.4□□□□□ -0.43
HDAC7-227ENST00000548080 CASC10Q5T4H9 136 aa12.4□□□□□ -0.43
HDAC7-227ENST00000548080 C5orf52A6NGY3 159 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 LINC00315P59091 139 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 COA6Q5JTJ3 125 aaKnown RBP12.39□□□□□ -0.43
HDAC7-227ENST00000548080 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 C11orf45Q8TAV5 145 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 C18orf32Q8TCD1 76 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 RASL10AQ92737 203 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 PRELID3AQ96N28 172 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 NDUFAF3Q9BU61 184 aa12.39□□□□□ -0.43
HDAC7-227ENST00000548080 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
HDAC7-227ENST00000548080 A0A087WWL8 130 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 PLAC8L1A1L4L8 177 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 A8MWV9 139 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 SMKR1H3BMG3 65 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 CRYGDP07320 174 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 MGPP08493 103 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 BAGE3Q86Y29 109 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 MRAP2Q96G30 205 aa12.38□□□□□ -0.43
HDAC7-227ENST00000548080 NOP10Q9NPE3 64 aaKnown RBP12.38□□□□□ -0.43
HDAC7-227ENST00000548080 NCR2O95944 276 aa12.37□□□□□ -0.43
HDAC7-227ENST00000548080 IQCJQ1A5X6 159 aa12.37□□□□□ -0.43
HDAC7-227ENST00000548080 LGALS9BQ3B8N2 356 aa12.37□□□□□ -0.43
HDAC7-227ENST00000548080 SAMD10Q9BYL1 202 aa12.37□□□□□ -0.43
HDAC7-227ENST00000548080 TENM2Q9NT68 2774 aa12.36□□□□□ -0.43
HDAC7-227ENST00000548080 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
HDAC7-227ENST00000548080 HOXA5P20719 270 aa12.36□□□□□ -0.43
HDAC7-227ENST00000548080 TRAV26-2A0A0B4J265 109 aa12.35□□□□□ -0.43
HDAC7-227ENST00000548080 RS1O15537 224 aa12.35□□□□□ -0.43
HDAC7-227ENST00000548080 FAM74A4Q5TZK3 123 aa12.35□□□□□ -0.43
HDAC7-227ENST00000548080 LAMTOR2Q9Y2Q5 125 aa12.35□□□□□ -0.43
HDAC7-227ENST00000548080 F5H697 171 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 GAS8-AS1O95177 125 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 GATA1P15976 413 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-227ENST00000548080 FAM222AQ5U5X8 452 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 Q6ZTI0 123 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 TNFRSF6BO95407 300 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 NPYP01303 97 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 ZNF56Q15929 161 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 Q6ZTC4 211 aa12.34□□□□□ -0.43
HDAC7-227ENST00000548080 SERF1AO75920 110 aa12.33□□□□□ -0.44
HDAC7-227ENST00000548080 C12orf74Q32Q52 190 aa12.33□□□□□ -0.44
HDAC7-227ENST00000548080 UFSP1Q6NVU6 142 aa12.33□□□□□ -0.44
HDAC7-227ENST00000548080 NRACQ8N912 160 aa12.33□□□□□ -0.44
HDAC7-227ENST00000548080 PHLDA1Q8WV24 401 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-227ENST00000548080 RHODO00212 210 aa12.32□□□□□ -0.44
HDAC7-227ENST00000548080 LINC00310P59036 64 aa12.32□□□□□ -0.44
HDAC7-227ENST00000548080 SUMO4Q6EEV6 95 aa12.32□□□□□ -0.44
HDAC7-227ENST00000548080 NIT1Q86X76 327 aa12.32□□□□□ -0.44
HDAC7-227ENST00000548080 HIST3H2BBQ8N257 126 aa12.32□□□□□ -0.44
HDAC7-227ENST00000548080 DKK2Q9UBU2 259 aa12.32□□□□□ -0.44
HDAC7-227ENST00000548080 LOC105371267A0A1B0GV96 52 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 GAGE12BA1L429 117 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 NUPR1O60356 82 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 GAGE7O76087 117 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 PPP1R17O96001 155 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms