RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 RHODO00212 210 aa13.42□□□□□ -0.26
SSH1-207ENST00000547862 Q6ZSA8 131 aa13.42□□□□□ -0.26
SSH1-207ENST00000547862 INO80EQ8NBZ0 244 aaPredicted RBP13.42□□□□□ -0.26
SSH1-207ENST00000547862 RMI2Q96E14 147 aa13.42□□□□□ -0.26
SSH1-207ENST00000547862 RBFOX3A6NFN3 312 aa13.41□□□□□ -0.26
SSH1-207ENST00000547862 KRBOX1C9JBD0 128 aa13.41□□□□□ -0.26
SSH1-207ENST00000547862 PIK3CD-AS1Q5SR53 167 aa13.41□□□□□ -0.26
SSH1-207ENST00000547862 SCXQ7RTU7 201 aa13.41□□□□□ -0.26
SSH1-207ENST00000547862 PHLDA3Q9Y5J5 127 aa13.41□□□□□ -0.26
SSH1-207ENST00000547862 RNF222A6NCQ9 220 aa13.4□□□□□ -0.26
SSH1-207ENST00000547862 FAM74A7A6NL05 159 aa13.4□□□□□ -0.26
SSH1-207ENST00000547862 TPT1P13693 172 aaKnown RBP13.4□□□□□ -0.26
SSH1-207ENST00000547862 UBE2G1P62253 170 aa13.4□□□□□ -0.26
SSH1-207ENST00000547862 AKR1C8PQ5T2L2 129 aa13.4□□□□□ -0.26
SSH1-207ENST00000547862 NIT1Q86X76 327 aa13.4□□□□□ -0.26
SSH1-207ENST00000547862 UBE2WQ96B02 151 aa13.4□□□□□ -0.26
SSH1-207ENST00000547862 CRIP1P50238 77 aa13.39□□□□□ -0.27
SSH1-207ENST00000547862 A0A087WX48 190 aa13.38□□□□□ -0.27
SSH1-207ENST00000547862 GIPP09681 153 aaPredicted RBP13.38□□□□□ -0.27
SSH1-207ENST00000547862 FAM162BQ5T6X4 162 aa13.38□□□□□ -0.27
SSH1-207ENST00000547862 KCNIP4Q6PIL6 250 aa13.38□□□□□ -0.27
SSH1-207ENST00000547862 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
SSH1-207ENST00000547862 COX11Q9Y6N1 276 aa13.38□□□□□ -0.27
SSH1-207ENST00000547862 MAP1LC3B2A6NCE7 125 aa13.37□□□□□ -0.27
SSH1-207ENST00000547862 PTTG1O95997 202 aa13.37□□□□□ -0.27
SSH1-207ENST00000547862 MAP1LC3BQ9GZQ8 125 aa13.37□□□□□ -0.27
SSH1-207ENST00000547862 SFRP2Q96HF1 295 aa13.36□□□□□ -0.27
SSH1-207ENST00000547862 FMC1Q96HJ9 113 aa13.36□□□□□ -0.27
SSH1-207ENST00000547862 SEC11BP0C7V7 166 aa13.35□□□□□ -0.27
SSH1-207ENST00000547862 AKR1C3P42330 323 aa13.35□□□□□ -0.27
SSH1-207ENST00000547862 RPL36AP83881 106 aaKnown RBP13.35□□□□□ -0.27
SSH1-207ENST00000547862 DNLZQ5SXM8 178 aa13.35□□□□□ -0.27
SSH1-207ENST00000547862 CST9LP1Q5W188 147 aa13.35□□□□□ -0.27
SSH1-207ENST00000547862 ZFP82Q8N141 532 aa13.35□□□□□ -0.27
SSH1-207ENST00000547862 Q8N976 141 aa13.35□□□□□ -0.27
SSH1-207ENST00000547862 RPL36ALQ969Q0 106 aaKnown RBP13.35□□□□□ -0.27
SSH1-207ENST00000547862 ZNF56Q15929 161 aa13.34□□□□□ -0.27
SSH1-207ENST00000547862 DEFB104AQ8WTQ1 72 aa13.34□□□□□ -0.27
SSH1-207ENST00000547862 NKX6-2Q9C056 277 aaPredicted RBP13.34□□□□□ -0.27
SSH1-207ENST00000547862 ZFP30Q9Y2G7 519 aa13.34□□□□□ -0.27
SSH1-207ENST00000547862 TMEM262E9PQX1 116 aa13.33□□□□□ -0.28
SSH1-207ENST00000547862 LINC01559Q495D7 138 aa13.33□□□□□ -0.28
SSH1-207ENST00000547862 CRPP02741 224 aa13.32□□□□□ -0.28
SSH1-207ENST00000547862 UBE2D3P61077 147 aa13.32□□□□□ -0.28
SSH1-207ENST00000547862 UBE2D2P62837 147 aa13.32□□□□□ -0.28
SSH1-207ENST00000547862 RPL19P84098 196 aaKnown RBP13.32□□□□□ -0.28
SSH1-207ENST00000547862 ELOBQ15370 118 aa13.32□□□□□ -0.28
SSH1-207ENST00000547862 ZNF674Q2M3X9 581 aa13.32□□□□□ -0.28
SSH1-207ENST00000547862 STOML3Q8TAV4 291 aa13.32□□□□□ -0.28
SSH1-207ENST00000547862 TRBV7-3A0A075B6L6 115 aa13.31□□□□□ -0.28
SSH1-207ENST00000547862 C15orf54Q8N8G6 183 aa13.31□□□□□ -0.28
SSH1-207ENST00000547862 CHAC1Q9BUX1 264 aa13.31□□□□□ -0.28
SSH1-207ENST00000547862 C1orf43Q9BWL3 253 aa13.31□□□□□ -0.28
SSH1-207ENST00000547862 TRBV10-1A0A0K0K1A3 114 aa13.3□□□□□ -0.28
SSH1-207ENST00000547862 A0A1B0GV50 99 aa13.3□□□□□ -0.28
SSH1-207ENST00000547862 KRTAP29-1A8MX34 341 aaPredicted RBP13.3□□□□□ -0.28
SSH1-207ENST00000547862 ARPC5O15511 151 aa13.3□□□□□ -0.28
SSH1-207ENST00000547862 LTAP01374 205 aa13.3□□□□□ -0.28
SSH1-207ENST00000547862 HLA-DQA1P01909 254 aa13.3□□□□□ -0.28
SSH1-207ENST00000547862 COX8CQ7Z4L0 72 aa13.3□□□□□ -0.28
SSH1-207ENST00000547862 CHCHD7Q9BUK0 85 aa13.3□□□□□ -0.28
SSH1-207ENST00000547862 MUC21A0A0G2JKD1 596 aa13.29□□□□□ -0.28
SSH1-207ENST00000547862 MUC21A0A140T8X8 626 aa13.29□□□□□ -0.28
SSH1-207ENST00000547862 FHITP49789 147 aa13.29□□□□□ -0.28
SSH1-207ENST00000547862 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
SSH1-207ENST00000547862 OR10AG1Q8NH19 301 aa13.29□□□□□ -0.28
SSH1-207ENST00000547862 CIRBP-AS1Q8TBR5 109 aa13.29□□□□□ -0.28
SSH1-207ENST00000547862 IGLV2-8P01709 118 aa13.28□□□□□ -0.28
SSH1-207ENST00000547862 ANGP03950 147 aaKnown RBP13.28□□□□□ -0.28
SSH1-207ENST00000547862 SSTP61278 116 aa13.28□□□□□ -0.28
SSH1-207ENST00000547862 Q0VG73 95 aa13.28□□□□□ -0.28
SSH1-207ENST00000547862 NEXN-AS1Q8NBZ9 246 aa13.28□□□□□ -0.28
SSH1-207ENST00000547862 PAGE4O60829 102 aa13.27□□□□□ -0.29
SSH1-207ENST00000547862 CLPSL2Q6UWE3 100 aa13.27□□□□□ -0.29
SSH1-207ENST00000547862 CHCHD5Q9BSY4 110 aa13.27□□□□□ -0.29
SSH1-207ENST00000547862 TRBV6-8A0A0A6YYG3 113 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 TRBV6-1A0A0K0K1D8 114 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 SCO2A0A1W2PP80 73 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 G3V3Q6 166 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 C14orf177Q52M58 125 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 PRR27Q6MZM9 219 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 ATRAIDQ6UW56 229 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 ENHOQ6UWT2 76 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 CYTL1Q9NRR1 136 aa13.26□□□□□ -0.29
SSH1-207ENST00000547862 SMLR1H3BR10 107 aa13.25□□□□□ -0.29
SSH1-207ENST00000547862 RAB4BP61018 213 aa13.25□□□□□ -0.29
SSH1-207ENST00000547862 TCEAL7Q9BRU2 100 aa13.25□□□□□ -0.29
SSH1-207ENST00000547862 ZNF471Q9BX82 626 aaPredicted RBP13.25□□□□□ -0.29
SSH1-207ENST00000547862 USP17L23D6RBM5 183 aa13.24□□□□□ -0.29
SSH1-207ENST00000547862 F5H697 171 aa13.24□□□□□ -0.29
SSH1-207ENST00000547862 OR10G8Q8NGN5 311 aa13.24□□□□□ -0.29
SSH1-207ENST00000547862 FAM213BQ8TBF2 198 aa13.24□□□□□ -0.29
SSH1-207ENST00000547862 PFDN1O60925 122 aa13.23□□□□□ -0.29
SSH1-207ENST00000547862 KRTAP10-4P60372 401 aaPredicted RBP13.23□□□□□ -0.29
SSH1-207ENST00000547862 SPANXN1Q5VSR9 72 aa13.23□□□□□ -0.29
SSH1-207ENST00000547862 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.23□□□□□ -0.29
SSH1-207ENST00000547862 PKHD1L1Q86WI1 4243 aa13.22□□□□□ -0.29
SSH1-207ENST00000547862 SFT2D1Q8WV19 159 aa13.22□□□□□ -0.29
SSH1-207ENST00000547862 BATF3Q9NR55 127 aa13.22□□□□□ -0.29
SSH1-207ENST00000547862 GAGE6Q13070 117 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms