RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SFRP2Q96HF1 295 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 Q9UF83 564 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 PHLDA3Q9Y5J5 127 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
COL2A1-209ENST00000546974 LTAP01374 205 aa9.57□□□□□ -0.88
COL2A1-209ENST00000546974 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
COL2A1-209ENST00000546974 TPT1P13693 172 aaKnown RBP9.57□□□□□ -0.88
COL2A1-209ENST00000546974 CST9LP1Q5W188 147 aa9.57□□□□□ -0.88
COL2A1-209ENST00000546974 Q8N3U1 123 aa9.57□□□□□ -0.88
COL2A1-209ENST00000546974 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
COL2A1-209ENST00000546974 A0A1B0GVG6 124 aa9.56□□□□□ -0.88
COL2A1-209ENST00000546974 AKR1C3P42330 323 aa9.56□□□□□ -0.88
COL2A1-209ENST00000546974 ZNF345Q14585 488 aa9.56□□□□□ -0.88
COL2A1-209ENST00000546974 TOR2AQ5JU69 321 aa9.56□□□□□ -0.88
COL2A1-209ENST00000546974 FAM74A4Q5TZK3 123 aa9.56□□□□□ -0.88
COL2A1-209ENST00000546974 KCNRGQ8N5I3 272 aa9.56□□□□□ -0.88
COL2A1-209ENST00000546974 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
COL2A1-209ENST00000546974 TMSB15BA0A087X1C1 80 aa9.55□□□□□ -0.88
COL2A1-209ENST00000546974 SMLR1H3BR10 107 aa9.55□□□□□ -0.88
COL2A1-209ENST00000546974 S100A9P06702 114 aaKnown RBP9.55□□□□□ -0.88
COL2A1-209ENST00000546974 SEC11BP0C7V7 166 aa9.55□□□□□ -0.88
COL2A1-209ENST00000546974 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
COL2A1-209ENST00000546974 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
COL2A1-209ENST00000546974 MBD3L1Q8WWY6 194 aa9.55□□□□□ -0.88
COL2A1-209ENST00000546974 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
COL2A1-209ENST00000546974 A0A087WWL8 130 aa9.54□□□□□ -0.88
COL2A1-209ENST00000546974 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
COL2A1-209ENST00000546974 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
COL2A1-209ENST00000546974 M0R381 172 aa9.54□□□□□ -0.88
COL2A1-209ENST00000546974 PAGE4O60829 102 aa9.54□□□□□ -0.88
COL2A1-209ENST00000546974 C1QBP02746 253 aa9.54□□□□□ -0.88
COL2A1-209ENST00000546974 SMR3BP02814 79 aaPredicted RBP9.54□□□□□ -0.88
COL2A1-209ENST00000546974 HMSDA8MTL9 139 aa9.53□□□□□ -0.88
COL2A1-209ENST00000546974 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
COL2A1-209ENST00000546974 NIT1Q86X76 327 aa9.53□□□□□ -0.88
COL2A1-209ENST00000546974 SFT2D1Q8WV19 159 aa9.53□□□□□ -0.88
COL2A1-209ENST00000546974 COX11Q9Y6N1 276 aa9.53□□□□□ -0.88
COL2A1-209ENST00000546974 URGCP-MRPS24S4R325 110 aa9.53□□□□□ -0.88
COL2A1-209ENST00000546974 A0A0D9SG52 128 aa9.52□□□□□ -0.89
COL2A1-209ENST00000546974 CXCL1P09341 107 aa9.52□□□□□ -0.89
COL2A1-209ENST00000546974 RPL36AP83881 106 aaKnown RBP9.52□□□□□ -0.89
COL2A1-209ENST00000546974 WFDC2Q14508 124 aa9.52□□□□□ -0.89
COL2A1-209ENST00000546974 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
COL2A1-209ENST00000546974 RPL36ALQ969Q0 106 aaKnown RBP9.52□□□□□ -0.89
COL2A1-209ENST00000546974 MLST8Q9BVC4 326 aa9.52□□□□□ -0.89
COL2A1-209ENST00000546974 DMBT1Q9UGM3 2413 aaPredicted RBP9.51□□□□□ -0.89
COL2A1-209ENST00000546974 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 PFDN1O60925 122 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 UBE2D3P61077 147 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 UBE2D2P62837 147 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 HAMPP81172 84 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 RMI2Q96E14 147 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 ZNF471Q9BX82 626 aaPredicted RBP9.51□□□□□ -0.89
COL2A1-209ENST00000546974 FAM30AQ9NZY2 134 aa9.51□□□□□ -0.89
COL2A1-209ENST00000546974 FLG2Q5D862 2391 aaPredicted RBP9.5□□□□□ -0.89
COL2A1-209ENST00000546974 A0A1B0GV50 99 aa9.5□□□□□ -0.89
COL2A1-209ENST00000546974 SCO2A0A1W2PP80 73 aa9.5□□□□□ -0.89
COL2A1-209ENST00000546974 KANTRA0A1W2PQU2 76 aa9.5□□□□□ -0.89
COL2A1-209ENST00000546974 RAB4BP61018 213 aa9.5□□□□□ -0.89
COL2A1-209ENST00000546974 ELOBQ15370 118 aa9.5□□□□□ -0.89
COL2A1-209ENST00000546974 BAGE2Q86Y30 109 aa9.5□□□□□ -0.89
COL2A1-209ENST00000546974 OR10G8Q8NGN5 311 aa9.5□□□□□ -0.89
COL2A1-209ENST00000546974 A0A087WX48 190 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 LECT2O14960 151 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 BCL2L11O43521 198 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 SNAI2O43623 268 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 H2AFB1P0C5Y9 115 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 EIF5AP63241 154 aaKnown RBP9.49□□□□□ -0.89
COL2A1-209ENST00000546974 RPL19P84098 196 aaKnown RBP9.49□□□□□ -0.89
COL2A1-209ENST00000546974 KCNIP4Q6PIL6 250 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 BAALCQ8WXS3 180 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
COL2A1-209ENST00000546974 KLK12Q9UKR0 248 aa9.49□□□□□ -0.89
COL2A1-209ENST00000546974 Q6ZSA8 131 aa9.48□□□□□ -0.89
COL2A1-209ENST00000546974 OR10AG1Q8NH19 301 aa9.48□□□□□ -0.89
COL2A1-209ENST00000546974 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
COL2A1-209ENST00000546974 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 OR5AL1P0C617 328 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 ATRAIDQ6UW56 229 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 TCTE3Q8IZS6 198 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 Q8N976 141 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 NEXN-AS1Q8NBZ9 246 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 DNAJC30Q96LL9 226 aa9.47□□□□□ -0.89
COL2A1-209ENST00000546974 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.9
COL2A1-209ENST00000546974 Q0VG73 95 aa9.46□□□□□ -0.9
COL2A1-209ENST00000546974 ZNF56Q15929 161 aa9.46□□□□□ -0.9
COL2A1-209ENST00000546974 SPANXN1Q5VSR9 72 aa9.46□□□□□ -0.9
COL2A1-209ENST00000546974 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
COL2A1-209ENST00000546974 hCG_2014768A0A024R1R8 64 aa9.45□□□□□ -0.9
COL2A1-209ENST00000546974 TMEM262E9PQX1 116 aa9.45□□□□□ -0.9
COL2A1-209ENST00000546974 RPL35P42766 123 aaKnown RBP9.45□□□□□ -0.9
COL2A1-209ENST00000546974 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
COL2A1-209ENST00000546974 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
COL2A1-209ENST00000546974 RBFOX3A6NFN3 312 aa9.44□□□□□ -0.9
COL2A1-209ENST00000546974 C11orf52Q96A22 123 aa9.44□□□□□ -0.9
COL2A1-209ENST00000546974 PKHD1L1Q86WI1 4243 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms