RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 BAALCQ8WXS3 180 aa12.28□□□□□ -0.44
CHERP-204ENST00000546538 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
CHERP-204ENST00000546538 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
CHERP-204ENST00000546538 BORCS7-ASMTA0A0B4J1R7 106 aa12.27□□□□□ -0.45
CHERP-204ENST00000546538 ZNF674Q2M3X9 581 aa12.27□□□□□ -0.45
CHERP-204ENST00000546538 NIT1Q86X76 327 aa12.27□□□□□ -0.45
CHERP-204ENST00000546538 FAT3Q8TDW7 4589 aa12.26□□□□□ -0.45
CHERP-204ENST00000546538 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
CHERP-204ENST00000546538 TMSB15BA0A087X1C1 80 aa12.26□□□□□ -0.45
CHERP-204ENST00000546538 MAP1LC3B2A6NCE7 125 aa12.26□□□□□ -0.45
CHERP-204ENST00000546538 FHITP49789 147 aa12.26□□□□□ -0.45
CHERP-204ENST00000546538 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
CHERP-204ENST00000546538 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
CHERP-204ENST00000546538 MAP1LC3BQ9GZQ8 125 aa12.26□□□□□ -0.45
CHERP-204ENST00000546538 hCG_2014768A0A024R1R8 64 aa12.25□□□□□ -0.45
CHERP-204ENST00000546538 LTAP01374 205 aa12.25□□□□□ -0.45
CHERP-204ENST00000546538 LINC01559Q495D7 138 aa12.25□□□□□ -0.45
CHERP-204ENST00000546538 FAM162BQ5T6X4 162 aa12.25□□□□□ -0.45
CHERP-204ENST00000546538 OR11H4Q8NGC9 324 aa12.25□□□□□ -0.45
CHERP-204ENST00000546538 ZFP30Q9Y2G7 519 aa12.25□□□□□ -0.45
CHERP-204ENST00000546538 A0A087WWC5 75 aa12.24□□□□□ -0.45
CHERP-204ENST00000546538 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
CHERP-204ENST00000546538 A0A1B0GVG6 124 aa12.24□□□□□ -0.45
CHERP-204ENST00000546538 RHODO00212 210 aa12.24□□□□□ -0.45
CHERP-204ENST00000546538 AKR1C8PQ5T2L2 129 aa12.24□□□□□ -0.45
CHERP-204ENST00000546538 NKX6-2Q9C056 277 aaPredicted RBP12.24□□□□□ -0.45
CHERP-204ENST00000546538 M0R381 172 aa12.23□□□□□ -0.45
CHERP-204ENST00000546538 SYT8Q8NBV8 401 aa12.23□□□□□ -0.45
CHERP-204ENST00000546538 FMC1Q96HJ9 113 aa12.23□□□□□ -0.45
CHERP-204ENST00000546538 ARPC5O15511 151 aa12.22□□□□□ -0.45
CHERP-204ENST00000546538 KLK12Q9UKR0 248 aa12.22□□□□□ -0.45
CHERP-204ENST00000546538 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
CHERP-204ENST00000546538 SMLR1H3BR10 107 aa12.21□□□□□ -0.45
CHERP-204ENST00000546538 UBE2D3P61077 147 aa12.21□□□□□ -0.45
CHERP-204ENST00000546538 UBE2D2P62837 147 aa12.21□□□□□ -0.45
CHERP-204ENST00000546538 LINC00528Q8N1L1 170 aa12.21□□□□□ -0.45
CHERP-204ENST00000546538 PKHD1L1Q86WI1 4243 aa12.21□□□□□ -0.45
CHERP-204ENST00000546538 KRTAP10-4P60372 401 aaPredicted RBP12.2□□□□□ -0.46
CHERP-204ENST00000546538 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
CHERP-204ENST00000546538 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
CHERP-204ENST00000546538 SCXQ7RTU7 201 aa12.2□□□□□ -0.46
CHERP-204ENST00000546538 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
CHERP-204ENST00000546538 UBE2G1P62253 170 aa12.2□□□□□ -0.46
CHERP-204ENST00000546538 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
CHERP-204ENST00000546538 ATRAIDQ6UW56 229 aa12.2□□□□□ -0.46
CHERP-204ENST00000546538 IGKV2D-24A0A075B6R9 120 aa12.19□□□□□ -0.46
CHERP-204ENST00000546538 PAGE4O60829 102 aa12.19□□□□□ -0.46
CHERP-204ENST00000546538 ZFP82Q8N141 532 aa12.19□□□□□ -0.46
CHERP-204ENST00000546538 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
CHERP-204ENST00000546538 UBE2WQ96B02 151 aa12.19□□□□□ -0.46
CHERP-204ENST00000546538 TRBV10-1A0A0K0K1A3 114 aa12.18□□□□□ -0.46
CHERP-204ENST00000546538 OR10G8Q8NGN5 311 aa12.18□□□□□ -0.46
CHERP-204ENST00000546538 TCEAL7Q9BRU2 100 aa12.18□□□□□ -0.46
CHERP-204ENST00000546538 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
CHERP-204ENST00000546538 AKR1C3P42330 323 aa12.17□□□□□ -0.46
CHERP-204ENST00000546538 PRR27Q6MZM9 219 aa12.17□□□□□ -0.46
CHERP-204ENST00000546538 MLST8Q9BVC4 326 aa12.17□□□□□ -0.46
CHERP-204ENST00000546538 COX11Q9Y6N1 276 aa12.17□□□□□ -0.46
CHERP-204ENST00000546538 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
CHERP-204ENST00000546538 HMCN2Q8NDA2 5059 aa12.17□□□□□ -0.46
CHERP-204ENST00000546538 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
CHERP-204ENST00000546538 ENHOQ6UWT2 76 aa12.16□□□□□ -0.46
CHERP-204ENST00000546538 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
CHERP-204ENST00000546538 RBFOX3A6NFN3 312 aa12.15□□□□□ -0.46
CHERP-204ENST00000546538 PFDN1O60925 122 aa12.15□□□□□ -0.46
CHERP-204ENST00000546538 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
CHERP-204ENST00000546538 Q8N976 141 aa12.15□□□□□ -0.46
CHERP-204ENST00000546538 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
CHERP-204ENST00000546538 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
CHERP-204ENST00000546538 RMI2Q96E14 147 aa12.15□□□□□ -0.46
CHERP-204ENST00000546538 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
CHERP-204ENST00000546538 A0A087WX48 190 aa12.14□□□□□ -0.47
CHERP-204ENST00000546538 TRBV6-8A0A0A6YYG3 113 aa12.14□□□□□ -0.47
CHERP-204ENST00000546538 MUC21A0A0G2JKD1 596 aa12.14□□□□□ -0.47
CHERP-204ENST00000546538 MUC21A0A140T8X8 626 aa12.14□□□□□ -0.47
CHERP-204ENST00000546538 A0A1B0GV50 99 aa12.14□□□□□ -0.47
CHERP-204ENST00000546538 PLA2G1BP04054 148 aaKnown RBP12.14□□□□□ -0.47
CHERP-204ENST00000546538 MPV17L2Q567V2 206 aa12.14□□□□□ -0.47
CHERP-204ENST00000546538 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
CHERP-204ENST00000546538 SSBP4Q9BWG4 385 aaPredicted RBP12.14□□□□□ -0.47
CHERP-204ENST00000546538 KRTAP29-1A8MX34 341 aaPredicted RBP12.13□□□□□ -0.47
CHERP-204ENST00000546538 SNAI2O43623 268 aa12.13□□□□□ -0.47
CHERP-204ENST00000546538 RAB4BP61018 213 aa12.13□□□□□ -0.47
CHERP-204ENST00000546538 STOML3Q8TAV4 291 aa12.13□□□□□ -0.47
CHERP-204ENST00000546538 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
CHERP-204ENST00000546538 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
CHERP-204ENST00000546538 CHAC1Q9BUX1 264 aa12.13□□□□□ -0.47
CHERP-204ENST00000546538 J3QL48 77 aa12.12□□□□□ -0.47
CHERP-204ENST00000546538 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
CHERP-204ENST00000546538 AKAP14Q86UN6 197 aa12.12□□□□□ -0.47
CHERP-204ENST00000546538 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
CHERP-204ENST00000546538 KIF25-AS1Q9Y6Z4 181 aa12.12□□□□□ -0.47
CHERP-204ENST00000546538 CXCL1P09341 107 aa12.11□□□□□ -0.47
CHERP-204ENST00000546538 ZNF345Q14585 488 aa12.11□□□□□ -0.47
CHERP-204ENST00000546538 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
CHERP-204ENST00000546538 ZNF56Q15929 161 aa12.11□□□□□ -0.47
CHERP-204ENST00000546538 BAGE2Q86Y30 109 aa12.11□□□□□ -0.47
CHERP-204ENST00000546538 C15orf54Q8N8G6 183 aa12.11□□□□□ -0.47
CHERP-204ENST00000546538 TMEM262E9PQX1 116 aa12.1□□□□□ -0.47
CHERP-204ENST00000546538 OR5AL1P0C617 328 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms