RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 A0A087WWL8 130 aa14.46□□□□□ -0.09
SCARB1-211ENST00000546215 CACNG7P62955 275 aa14.46□□□□□ -0.09
SCARB1-211ENST00000546215 SLC25A29Q8N8R3 303 aa14.46□□□□□ -0.09
SCARB1-211ENST00000546215 CNFNQ9BYD5 112 aa14.46□□□□□ -0.09
SCARB1-211ENST00000546215 A0A096LPF7 62 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 TMEM218A2RU14 115 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 FOXA3P55318 350 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-211ENST00000546215 FAM74A4Q5TZK3 123 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 WDR73Q6P4I2 378 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 Q6ZSN1 163 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 OR10G8Q8NGN5 311 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 TSKUQ8WUA8 353 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 MSRB1Q9NZV6 116 aa14.45□□□□□ -0.1
SCARB1-211ENST00000546215 TRBV6-4A0A1B0GX49 114 aa14.44□□□□□ -0.1
SCARB1-211ENST00000546215 RHODO00212 210 aa14.44□□□□□ -0.1
SCARB1-211ENST00000546215 LY6G6CO95867 125 aa14.44□□□□□ -0.1
SCARB1-211ENST00000546215 RYR2Q92736 4967 aa14.44□□□□□ -0.1
SCARB1-211ENST00000546215 P0DMU3 169 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 FAM231AP0DMU4 169 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 FAM231CP0DMU5 169 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 ADCYAP1P18509 176 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 GFRA4Q9GZZ7 299 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 FAM231BA6NCW3 169 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 GYPEP15421 78 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 NTF3P20783 257 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 PNRC1Q12796 327 aaPredicted RBP14.43□□□□□ -0.1
SCARB1-211ENST00000546215 ICOSQ9Y6W8 199 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 KIF25-AS1Q9Y6Z4 181 aa14.43□□□□□ -0.1
SCARB1-211ENST00000546215 K7EQD1 137 aa14.42□□□□□ -0.1
SCARB1-211ENST00000546215 C14orf178Q8N769 122 aaPredicted RBP14.42□□□□□ -0.1
SCARB1-211ENST00000546215 AP1S3Q96PC3 154 aa14.42□□□□□ -0.1
SCARB1-211ENST00000546215 RYR3Q15413 4870 aa14.41□□□□□ -0.1
SCARB1-211ENST00000546215 LOC100131303A0A0U1RQF7 123 aa14.41□□□□□ -0.1
SCARB1-211ENST00000546215 HIGD1CA8MV81 97 aa14.41□□□□□ -0.1
SCARB1-211ENST00000546215 RHOHQ15669 191 aa14.41□□□□□ -0.1
SCARB1-211ENST00000546215 MRPL23Q16540 153 aaKnown RBP14.41□□□□□ -0.1
SCARB1-211ENST00000546215 PGLYRP4Q96LB8 373 aa14.41□□□□□ -0.1
SCARB1-211ENST00000546215 DNAH6Q9C0G6 4158 aa14.41□□□□□ -0.1
SCARB1-211ENST00000546215 F8W036 122 aa14.4□□□□□ -0.1
SCARB1-211ENST00000546215 PRADC1Q9BSG0 188 aa14.4□□□□□ -0.1
SCARB1-211ENST00000546215 LINC00315P59091 139 aa14.39□□□□□ -0.11
SCARB1-211ENST00000546215 TWIST1Q15672 202 aa14.39□□□□□ -0.11
SCARB1-211ENST00000546215 RNF212Q495C1 297 aa14.39□□□□□ -0.11
SCARB1-211ENST00000546215 SEC11CQ9BY50 192 aa14.39□□□□□ -0.11
SCARB1-211ENST00000546215 TRGC1P0CF51 173 aa14.38□□□□□ -0.11
SCARB1-211ENST00000546215 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
SCARB1-211ENST00000546215 EVI2AP22794 236 aa14.38□□□□□ -0.11
SCARB1-211ENST00000546215 ESRGQ1W209 222 aa14.38□□□□□ -0.11
SCARB1-211ENST00000546215 Q9UF83 564 aa14.38□□□□□ -0.11
SCARB1-211ENST00000546215 SMIM27A0A1W2PRY6 76 aa14.37□□□□□ -0.11
SCARB1-211ENST00000546215 CCL18P55774 89 aa14.37□□□□□ -0.11
SCARB1-211ENST00000546215 RAB4BP61018 213 aa14.37□□□□□ -0.11
SCARB1-211ENST00000546215 NUP35Q8NFH5 326 aa14.37□□□□□ -0.11
SCARB1-211ENST00000546215 LINC00588Q9Y4M8 146 aa14.37□□□□□ -0.11
SCARB1-211ENST00000546215 SRIP30626 198 aa14.36□□□□□ -0.11
SCARB1-211ENST00000546215 ZNF56Q15929 161 aa14.36□□□□□ -0.11
SCARB1-211ENST00000546215 NEGR1Q7Z3B1 354 aa14.36□□□□□ -0.11
SCARB1-211ENST00000546215 UBE2DNLQ8IWF7 75 aa14.36□□□□□ -0.11
SCARB1-211ENST00000546215 A0A1B0GUT8 65 aa14.35□□□□□ -0.11
SCARB1-211ENST00000546215 NAT8BQ9UHF3 227 aa14.35□□□□□ -0.11
SCARB1-211ENST00000546215 PPP1R2P9O14990 202 aa14.34□□□□□ -0.11
SCARB1-211ENST00000546215 C10orf91Q5T1B1 145 aa14.34□□□□□ -0.11
SCARB1-211ENST00000546215 BORCS7Q96B45 105 aa14.34□□□□□ -0.11
SCARB1-211ENST00000546215 DPH3P1Q9H4G8 78 aa14.34□□□□□ -0.11
SCARB1-211ENST00000546215 F5H697 171 aa14.34□□□□□ -0.11
SCARB1-211ENST00000546215 LYPD5Q6UWN5 251 aa14.34□□□□□ -0.11
SCARB1-211ENST00000546215 ANAPC16Q96DE5 110 aa14.34□□□□□ -0.11
SCARB1-211ENST00000546215 TRBV10-1A0A0K0K1A3 114 aa14.33□□□□□ -0.12
SCARB1-211ENST00000546215 MT-ND4LP03901 98 aa14.33□□□□□ -0.12
SCARB1-211ENST00000546215 LINC00694P0DN24 101 aa14.33□□□□□ -0.12
SCARB1-211ENST00000546215 SH2D6Q7Z4S9 175 aa14.33□□□□□ -0.12
SCARB1-211ENST00000546215 GAGE12JA6NER3 117 aa14.32□□□□□ -0.12
SCARB1-211ENST00000546215 FAM3BP58499 235 aaPredicted RBP14.32□□□□□ -0.12
SCARB1-211ENST00000546215 GAGE1Q13065 139 aa14.32□□□□□ -0.12
SCARB1-211ENST00000546215 GAGE4Q13068 117 aa14.32□□□□□ -0.12
SCARB1-211ENST00000546215 GAGE5Q13069 117 aa14.32□□□□□ -0.12
SCARB1-211ENST00000546215 GAGE13Q4V321 117 aa14.32□□□□□ -0.12
SCARB1-211ENST00000546215 MGPP08493 103 aa14.31□□□□□ -0.12
SCARB1-211ENST00000546215 CARHSP1Q9Y2V2 147 aaKnown RBP14.31□□□□□ -0.12
SCARB1-211ENST00000546215 SMIM15Q7Z3B0 74 aa14.3□□□□□ -0.12
SCARB1-211ENST00000546215 MRPS16Q9Y3D3 137 aaKnown RBP14.3□□□□□ -0.12
SCARB1-211ENST00000546215 M0QY20 66 aa14.3□□□□□ -0.12
SCARB1-211ENST00000546215 RIGQ13278 110 aa14.3□□□□□ -0.12
SCARB1-211ENST00000546215 SUMO4Q6EEV6 95 aa14.3□□□□□ -0.12
SCARB1-211ENST00000546215 ZNRF2Q8NHG8 242 aa14.3□□□□□ -0.12
SCARB1-211ENST00000546215 UPK3BQ9BT76 320 aa14.3□□□□□ -0.12
SCARB1-211ENST00000546215 NEXN-AS1Q8NBZ9 246 aa14.29□□□□□ -0.12
SCARB1-211ENST00000546215 ATP6V0E2Q8NHE4 81 aa14.29□□□□□ -0.12
SCARB1-211ENST00000546215 TRBV7-3A0A075B6L6 115 aa14.28□□□□□ -0.12
SCARB1-211ENST00000546215 TIRAPP58753 221 aa14.28□□□□□ -0.12
SCARB1-211ENST00000546215 TMEM191AQ9H0A3 160 aa14.28□□□□□ -0.12
SCARB1-211ENST00000546215 RPL36AP83881 106 aaKnown RBP14.27□□□□□ -0.12
SCARB1-211ENST00000546215 RPL36ALQ969Q0 106 aaKnown RBP14.27□□□□□ -0.12
SCARB1-211ENST00000546215 GTSF1LQ9H1H1 148 aa14.26□□□□□ -0.13
SCARB1-211ENST00000546215 H7C1H1 209 aa14.26□□□□□ -0.13
SCARB1-211ENST00000546215 UBE2D3P61077 147 aa14.26□□□□□ -0.13
SCARB1-211ENST00000546215 UBE2D2P62837 147 aa14.26□□□□□ -0.13
SCARB1-211ENST00000546215 Q9H8V8 135 aa14.26□□□□□ -0.13
SCARB1-211ENST00000546215 GATD1Q8NB37 220 aa14.25□□□□□ -0.13
SCARB1-211ENST00000546215 CTDSP1Q9GZU7 261 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms