RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 BAALCQ8WXS3 180 aa14.18□□□□□ -0.14
MSLN-202ENST00000545450 EEF1AKMT3Q96AZ1 226 aa14.18□□□□□ -0.14
MSLN-202ENST00000545450 ATP6V0BQ99437 205 aa14.17□□□□□ -0.14
MSLN-202ENST00000545450 PRADC1Q9BSG0 188 aa14.17□□□□□ -0.14
MSLN-202ENST00000545450 PGPEP1Q9NXJ5 209 aa14.17□□□□□ -0.14
MSLN-202ENST00000545450 TRBV7-1A0A0A6YYK4 115 aa14.17□□□□□ -0.14
MSLN-202ENST00000545450 A0A1B0GV72 72 aa14.16□□□□□ -0.14
MSLN-202ENST00000545450 C2orf66Q6UXQ4 117 aa14.16□□□□□ -0.14
MSLN-202ENST00000545450 PRSS29PA6NIE9 313 aa14.16□□□□□ -0.14
MSLN-202ENST00000545450 C9orf139Q6ZV77 190 aa14.16□□□□□ -0.14
MSLN-202ENST00000545450 RPL39LQ96EH5 51 aaKnown RBP14.16□□□□□ -0.14
MSLN-202ENST00000545450 C16orf92Q96LL3 132 aa14.16□□□□□ -0.14
MSLN-202ENST00000545450 DPH3P1Q9H4G8 78 aa14.16□□□□□ -0.14
MSLN-202ENST00000545450 UBE2D1P51668 147 aa14.15□□□□□ -0.14
MSLN-202ENST00000545450 CFAP126Q5VTH2 177 aa14.15□□□□□ -0.14
MSLN-202ENST00000545450 ATP6V0E2Q8NHE4 81 aa14.15□□□□□ -0.14
MSLN-202ENST00000545450 TMEM238LA0A1B0GVL6 79 aa14.15□□□□□ -0.15
MSLN-202ENST00000545450 A6NJY4 79 aa14.15□□□□□ -0.15
MSLN-202ENST00000545450 M0R381 172 aa14.15□□□□□ -0.15
MSLN-202ENST00000545450 APOMO95445 188 aa14.15□□□□□ -0.15
MSLN-202ENST00000545450 SMCPP49901 116 aaPredicted RBP14.15□□□□□ -0.15
MSLN-202ENST00000545450 ZFAND2AQ8N6M9 145 aa14.15□□□□□ -0.15
MSLN-202ENST00000545450 C20orf173Q96LM9 149 aa14.15□□□□□ -0.15
MSLN-202ENST00000545450 MRPL16Q9NX20 251 aaKnown RBP14.15□□□□□ -0.15
MSLN-202ENST00000545450 ZNF815PA8K554 130 aa14.14□□□□□ -0.15
MSLN-202ENST00000545450 ATP5G2Q06055 141 aa14.14□□□□□ -0.15
MSLN-202ENST00000545450 FOXI1Q12951 378 aa14.14□□□□□ -0.15
MSLN-202ENST00000545450 LCNL1Q6ZST4 164 aa14.14□□□□□ -0.15
MSLN-202ENST00000545450 DLX4Q92988 240 aaPredicted RBP14.14□□□□□ -0.15
MSLN-202ENST00000545450 LINC00477Q96M19 166 aa14.14□□□□□ -0.15
MSLN-202ENST00000545450 C1QTNF4Q9BXJ3 329 aa14.14□□□□□ -0.15
MSLN-202ENST00000545450 SCGB2A2Q13296 93 aa14.13□□□□□ -0.15
MSLN-202ENST00000545450 C14orf178Q8N769 122 aaPredicted RBP14.13□□□□□ -0.15
MSLN-202ENST00000545450 GLMPQ8WWB7 406 aa14.13□□□□□ -0.15
MSLN-202ENST00000545450 TRAV21A0A0B4J279 112 aa14.13□□□□□ -0.15
MSLN-202ENST00000545450 LINC01549A6NIU2 74 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 SPRY2O43597 315 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 TCTEX1D4Q5JR98 221 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 Q6YL49 198 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 PLEKHB2Q96CS7 222 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 FAM223BA6NKX1 122 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 MED14OSP0DP75 135 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 ASIPP42127 132 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 TMEM95Q3KNT9 176 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 SCGB1D4Q6XE38 83 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 FAM223AQ8IWN6 122 aa14.12□□□□□ -0.15
MSLN-202ENST00000545450 HECTD1Q9ULT8 2610 aa14.11□□□□□ -0.15
MSLN-202ENST00000545450 S100A4P26447 101 aaKnown RBP14.11□□□□□ -0.15
MSLN-202ENST00000545450 PHLDA3Q9Y5J5 127 aa14.11□□□□□ -0.15
MSLN-202ENST00000545450 TSPAN13O95857 204 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 CRYGDP07320 174 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 CD7P09564 240 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 UBE2D3P61077 147 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 UBE2D2P62837 147 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 GPHB5Q86YW7 130 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 SONP18583 2426 aaKnown RBP14.1□□□□□ -0.15
MSLN-202ENST00000545450 J3KRW8 73 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 PPP1R17O96001 155 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 SRSF9Q13242 221 aaKnown RBP eCLIP14.1□□□□□ -0.15
MSLN-202ENST00000545450 VPREB3Q9UKI3 123 aa14.1□□□□□ -0.15
MSLN-202ENST00000545450 FASNP49327 2511 aaKnown RBP14.09□□□□□ -0.15
MSLN-202ENST00000545450 ANXA2RQ3ZCQ2 193 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 NFE4Q86UQ8 179 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 POM121L12Q8N7R1 296 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 OVOL1O14753 267 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 BRI3O95415 125 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 MGPP08493 103 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 CFHR3Q02985 330 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 OR10J6PQ8NGY7 276 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 CDIP1Q9H305 208 aa14.09□□□□□ -0.15
MSLN-202ENST00000545450 H3BUA1 57 aa14.08□□□□□ -0.16
MSLN-202ENST00000545450 KLHL30-AS1Q8NEE0 82 aa14.08□□□□□ -0.16
MSLN-202ENST00000545450 IGLV1-40P01703 118 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 CKS1BP61024 79 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 ZFP2Q6ZN57 461 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 SYT8Q8NBV8 401 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 FAM19A4Q96LR4 140 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 ACANP16112 2415 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 IGLV4-69A0A075B6H9 119 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 SOCS3O14543 225 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 DUSP14O95147 198 aaKnown RBP14.07□□□□□ -0.16
MSLN-202ENST00000545450 PF4V1P10720 104 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 PSMB2P49721 201 aa14.07□□□□□ -0.16
MSLN-202ENST00000545450 LOC107984156A0A0G2JMH3 177 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 A0A0J9YY99 117 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 C11orf86A6NJI1 115 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 TSHBP01222 138 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 TRBV12-3P01733 135 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 RNASE3P12724 160 aaKnown RBP14.06□□□□□ -0.16
MSLN-202ENST00000545450 RPL32P62910 135 aaKnown RBP14.06□□□□□ -0.16
MSLN-202ENST00000545450 PAPPA-AS1Q5QFB9 102 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 APRG1Q8IVJ8 170 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 ARL17AQ8IVW1 177 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 NDUFA11Q86Y39 141 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 ZNF580Q9UK33 172 aa14.06□□□□□ -0.16
MSLN-202ENST00000545450 IGIPA6NJ69 53 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 GNRH2O43555 120 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 NXPH4O95158 308 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 LYRM7Q5U5X0 104 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 IGHV4OR15-8A0A075B7B6 117 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms