RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 EREGO14944 169 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 GNG4P50150 75 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 RPS20P60866 119 aaKnown RBP8.05□□□□□ -1.12
HDAC4-216ENST00000544989 BLOC1S1P78537 153 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 OR10J3Q5JRS4 329 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 LELP1Q5T871 98 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 VAX2Q9UIW0 290 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 TRBV10-1A0A0K0K1A3 114 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 CRYGDP07320 174 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 OR5AL1P0C617 328 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 FAM74A4Q5TZK3 123 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 PRR27Q6MZM9 219 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 WFDC10BQ8IUB3 73 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 MSRB1Q9NZV6 116 aa8.04□□□□□ -1.12
HDAC4-216ENST00000544989 SNAI2O43623 268 aa8.03□□□□□ -1.12
HDAC4-216ENST00000544989 CENPWQ5EE01 88 aa8.03□□□□□ -1.12
HDAC4-216ENST00000544989 SPANXN1Q5VSR9 72 aa8.03□□□□□ -1.12
HDAC4-216ENST00000544989 ZNF575Q86XF7 245 aa8.03□□□□□ -1.12
HDAC4-216ENST00000544989 SSBP4Q9BWG4 385 aaPredicted RBP8.03□□□□□ -1.12
HDAC4-216ENST00000544989 MED9Q9NWA0 146 aa8.03□□□□□ -1.12
HDAC4-216ENST00000544989 LRP1BQ9NZR2 4599 aa8.03□□□□□ -1.12
HDAC4-216ENST00000544989 GAGE12JA6NER3 117 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 LINC00694P0DN24 101 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 ERVFC1-1P60608 527 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 RAB4BP61018 213 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 GAGE1Q13065 139 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 GAGE4Q13068 117 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 GAGE5Q13069 117 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 GAGE13Q4V321 117 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.02□□□□□ -1.13
HDAC4-216ENST00000544989 DERL1Q9BUN8 251 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 SAMD10Q9BYL1 202 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 JPT2Q9H910 190 aa8.02□□□□□ -1.13
HDAC4-216ENST00000544989 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
HDAC4-216ENST00000544989 A0A087WWL8 130 aa8.01□□□□□ -1.13
HDAC4-216ENST00000544989 P01737 135 aa8.01□□□□□ -1.13
HDAC4-216ENST00000544989 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
HDAC4-216ENST00000544989 RPL36AP83881 106 aaKnown RBP8.01□□□□□ -1.13
HDAC4-216ENST00000544989 RPL19P84098 196 aaKnown RBP8.01□□□□□ -1.13
HDAC4-216ENST00000544989 Q6ZRN7 208 aaPredicted RBP8.01□□□□□ -1.13
HDAC4-216ENST00000544989 Q6ZSN1 163 aa8.01□□□□□ -1.13
HDAC4-216ENST00000544989 RPL36ALQ969Q0 106 aaKnown RBP8.01□□□□□ -1.13
HDAC4-216ENST00000544989 F2Z2F3 143 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 TMEM250H0YL14 139 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 NDUFS6O75380 124 aaKnown RBP8□□□□□ -1.13
HDAC4-216ENST00000544989 CACNG7P62955 275 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 LAGE3Q14657 143 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 TOR2AQ5JU69 321 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 ALKAL2Q6UX46 152 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 C14orf178Q8N769 122 aaPredicted RBP8□□□□□ -1.13
HDAC4-216ENST00000544989 OR2D3Q8NGH3 330 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 OR10AG1Q8NH19 301 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 AP1S3Q96PC3 154 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 PGPEP1Q9NXJ5 209 aa8□□□□□ -1.13
HDAC4-216ENST00000544989 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 RAB19A4D1S5 217 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 C19orf71A6NCJ1 209 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 IBA57-AS1B1ANH7 110 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 IGLV2-8P01709 118 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 ZNF56Q15929 161 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 SPATA12Q7Z6I5 190 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 FER1L6-AS1Q8NA97 138 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 OR10G8Q8NGN5 311 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 LYPD6BQ8NI32 183 aa7.99□□□□□ -1.13
HDAC4-216ENST00000544989 RBFOX3A6NFN3 312 aa7.98□□□□□ -1.13
HDAC4-216ENST00000544989 PSCAO43653 123 aa7.98□□□□□ -1.13
HDAC4-216ENST00000544989 KCNIP4Q6PIL6 250 aa7.98□□□□□ -1.13
HDAC4-216ENST00000544989 CHCHD7Q9BUK0 85 aa7.98□□□□□ -1.13
HDAC4-216ENST00000544989 TM2D2Q9BX73 214 aa7.98□□□□□ -1.13
HDAC4-216ENST00000544989 URGCP-MRPS24S4R325 110 aa7.98□□□□□ -1.13
HDAC4-216ENST00000544989 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
HDAC4-216ENST00000544989 F5H697 171 aa7.97□□□□□ -1.13
HDAC4-216ENST00000544989 H7C1H1 209 aa7.97□□□□□ -1.13
HDAC4-216ENST00000544989 CDK2AP2O75956 126 aa7.97□□□□□ -1.13
HDAC4-216ENST00000544989 IGLC6P0CF74 106 aa7.97□□□□□ -1.13
HDAC4-216ENST00000544989 PKIAP61925 76 aa7.97□□□□□ -1.13
HDAC4-216ENST00000544989 TMEM97Q5BJF2 176 aa7.97□□□□□ -1.13
HDAC4-216ENST00000544989 WDR73Q6P4I2 378 aa7.97□□□□□ -1.13
HDAC4-216ENST00000544989 TRBV20OR9-2A0A075B6H5 130 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 TRAV8-3A0A0A6YYJ7 113 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 IGHV3-30P01768 117 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 IGHV3-33P01772 117 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 TRGC1P0CF51 173 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 IGHV3-30-3P0DP02 117 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 IGHV3-30-5P0DP03 117 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 UBE2D3P61077 147 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 UBE2D2P62837 147 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 ELOBQ15370 118 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 TPPP3Q9BW30 176 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 KRTAP4-5Q9BYR2 181 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 COX11Q9Y6N1 276 aa7.96□□□□□ -1.14
HDAC4-216ENST00000544989 A0A087WTM6 91 aa7.95□□□□□ -1.14
HDAC4-216ENST00000544989 DAZ4Q86SG3 579 aaKnown RBP7.95□□□□□ -1.14
HDAC4-216ENST00000544989 RMI2Q96E14 147 aa7.95□□□□□ -1.14
HDAC4-216ENST00000544989 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
HDAC4-216ENST00000544989 DAZ3Q9NR90 486 aaKnown RBP7.95□□□□□ -1.14
HDAC4-216ENST00000544989 TNFRSF18Q9Y5U5 241 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms