RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GAGE1Q13065 139 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 GAGE4Q13068 117 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 GAGE5Q13069 117 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 LAGE3Q14657 143 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 LINC01559Q495D7 138 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 GAGE13Q4V321 117 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 SFT2D1Q8WV19 159 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 JPT2Q9H910 190 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 PHLDA3Q9Y5J5 127 aa10.85□□□□□ -0.67
DDX55-212ENST00000544738 LRP1Q07954 4544 aaKnown RBP10.84□□□□□ -0.67
DDX55-212ENST00000544738 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
DDX55-212ENST00000544738 PAGE4O60829 102 aa10.84□□□□□ -0.67
DDX55-212ENST00000544738 S100A9P06702 114 aaKnown RBP10.84□□□□□ -0.67
DDX55-212ENST00000544738 TPT1P13693 172 aaKnown RBP10.84□□□□□ -0.67
DDX55-212ENST00000544738 AKR1C3P42330 323 aa10.84□□□□□ -0.67
DDX55-212ENST00000544738 MBD3L1Q8WWY6 194 aa10.84□□□□□ -0.67
DDX55-212ENST00000544738 Q9HAA7 133 aa10.84□□□□□ -0.67
DDX55-212ENST00000544738 LRCOL1A6NCL2 159 aa10.83□□□□□ -0.68
DDX55-212ENST00000544738 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
DDX55-212ENST00000544738 EIF5AP63241 154 aaKnown RBP10.83□□□□□ -0.68
DDX55-212ENST00000544738 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
DDX55-212ENST00000544738 NTN5Q8WTR8 489 aaPredicted RBP10.83□□□□□ -0.68
DDX55-212ENST00000544738 SFRP2Q96HF1 295 aa10.83□□□□□ -0.68
DDX55-212ENST00000544738 TM2D2Q9BX73 214 aa10.83□□□□□ -0.68
DDX55-212ENST00000544738 SAMD10Q9BYL1 202 aa10.83□□□□□ -0.68
DDX55-212ENST00000544738 KANTRA0A1W2PQU2 76 aa10.82□□□□□ -0.68
DDX55-212ENST00000544738 FAM74A4Q5TZK3 123 aa10.82□□□□□ -0.68
DDX55-212ENST00000544738 ZFP82Q8N141 532 aa10.82□□□□□ -0.68
DDX55-212ENST00000544738 ZNF471Q9BX82 626 aaPredicted RBP10.82□□□□□ -0.68
DDX55-212ENST00000544738 TRAV8-3A0A0A6YYJ7 113 aa10.81□□□□□ -0.68
DDX55-212ENST00000544738 BCL2L11O43521 198 aa10.81□□□□□ -0.68
DDX55-212ENST00000544738 PFDN1O60925 122 aa10.81□□□□□ -0.68
DDX55-212ENST00000544738 TOR2AQ5JU69 321 aa10.81□□□□□ -0.68
DDX55-212ENST00000544738 C14orf178Q8N769 122 aaPredicted RBP10.81□□□□□ -0.68
DDX55-212ENST00000544738 TMSB15BA0A087X1C1 80 aa10.8□□□□□ -0.68
DDX55-212ENST00000544738 IGLV5-52A0A0A0MRZ9 124 aa10.8□□□□□ -0.68
DDX55-212ENST00000544738 M0R381 172 aa10.8□□□□□ -0.68
DDX55-212ENST00000544738 H2AFB1P0C5Y9 115 aa10.8□□□□□ -0.68
DDX55-212ENST00000544738 DNAH8Q96JB1 4490 aa10.8□□□□□ -0.68
DDX55-212ENST00000544738 A0A087WWL8 130 aa10.79□□□□□ -0.68
DDX55-212ENST00000544738 TRBV10-1A0A0K0K1A3 114 aa10.79□□□□□ -0.68
DDX55-212ENST00000544738 PLA2G1BP04054 148 aaKnown RBP10.79□□□□□ -0.68
DDX55-212ENST00000544738 BAGE2Q86Y30 109 aa10.79□□□□□ -0.68
DDX55-212ENST00000544738 Q8N814 137 aa10.79□□□□□ -0.68
DDX55-212ENST00000544738 DEFB104AQ8WTQ1 72 aa10.79□□□□□ -0.68
DDX55-212ENST00000544738 Q9UF83 564 aa10.79□□□□□ -0.68
DDX55-212ENST00000544738 A0A1B0GV50 99 aa10.78□□□□□ -0.68
DDX55-212ENST00000544738 CXCL1P09341 107 aa10.78□□□□□ -0.68
DDX55-212ENST00000544738 TMEM70Q9BUB7 260 aa10.78□□□□□ -0.68
DDX55-212ENST00000544738 COX11Q9Y6N1 276 aa10.78□□□□□ -0.68
DDX55-212ENST00000544738 URGCP-MRPS24S4R325 110 aa10.78□□□□□ -0.68
DDX55-212ENST00000544738 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
DDX55-212ENST00000544738 RPL36AP83881 106 aaKnown RBP10.77□□□□□ -0.69
DDX55-212ENST00000544738 TMUB2Q71RG4 321 aa10.77□□□□□ -0.69
DDX55-212ENST00000544738 DAZ4Q86SG3 579 aaKnown RBP10.77□□□□□ -0.69
DDX55-212ENST00000544738 RPL36ALQ969Q0 106 aaKnown RBP10.77□□□□□ -0.69
DDX55-212ENST00000544738 MLST8Q9BVC4 326 aa10.77□□□□□ -0.69
DDX55-212ENST00000544738 DAZ3Q9NR90 486 aaKnown RBP10.77□□□□□ -0.69
DDX55-212ENST00000544738 Q8N3U1 123 aa10.76□□□□□ -0.69
DDX55-212ENST00000544738 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
DDX55-212ENST00000544738 TRBV7-3A0A075B6L6 115 aa10.75□□□□□ -0.69
DDX55-212ENST00000544738 RAB4BP61018 213 aa10.75□□□□□ -0.69
DDX55-212ENST00000544738 NIT1Q86X76 327 aa10.75□□□□□ -0.69
DDX55-212ENST00000544738 RMI2Q96E14 147 aa10.75□□□□□ -0.69
DDX55-212ENST00000544738 CHCHD7Q9BUK0 85 aa10.75□□□□□ -0.69
DDX55-212ENST00000544738 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
DDX55-212ENST00000544738 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
DDX55-212ENST00000544738 RAB5CP51148 216 aa10.74□□□□□ -0.69
DDX55-212ENST00000544738 ELOBQ15370 118 aa10.74□□□□□ -0.69
DDX55-212ENST00000544738 EIF5AL1Q6IS14 154 aaKnown RBP10.74□□□□□ -0.69
DDX55-212ENST00000544738 SSBP4Q9BWG4 385 aaPredicted RBP10.74□□□□□ -0.69
DDX55-212ENST00000544738 MANBALQ9NQG1 85 aa10.74□□□□□ -0.69
DDX55-212ENST00000544738 A0A087WX48 190 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 TRAV1-1A0A0B4J248 108 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 TEX46H3BTG2 121 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 SNAI2O43623 268 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 C1QBP02746 253 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 OR5AL1P0C617 328 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 UBE2D3P61077 147 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 UBE2D2P62837 147 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 RPL19P84098 196 aaKnown RBP10.73□□□□□ -0.69
DDX55-212ENST00000544738 SPANXN1Q5VSR9 72 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 PRR27Q6MZM9 219 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 KCNIP4Q6PIL6 250 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
DDX55-212ENST00000544738 OR10G8Q8NGN5 311 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 OR10AG1Q8NH19 301 aa10.73□□□□□ -0.69
DDX55-212ENST00000544738 RPL35P42766 123 aaKnown RBP10.72□□□□□ -0.69
DDX55-212ENST00000544738 ZNF56Q15929 161 aa10.72□□□□□ -0.69
DDX55-212ENST00000544738 LINC00528Q8N1L1 170 aa10.72□□□□□ -0.69
DDX55-212ENST00000544738 GNG13Q9P2W3 67 aa10.72□□□□□ -0.69
DDX55-212ENST00000544738 C11orf52Q96A22 123 aa10.71□□□□□ -0.69
DDX55-212ENST00000544738 KLK12Q9UKR0 248 aa10.71□□□□□ -0.69
DDX55-212ENST00000544738 CCL20P78556 96 aa10.7□□□□□ -0.7
DDX55-212ENST00000544738 WFDC2Q14508 124 aa10.7□□□□□ -0.7
DDX55-212ENST00000544738 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
DDX55-212ENST00000544738 F5H697 171 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms