RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 FRAS1Q86XX4 4008 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 TRBV20OR9-2A0A075B6H5 130 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 RHODO00212 210 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 SMIM17P0DL12 118 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 RPS20P60866 119 aaKnown RBP7.57□□□□□ -1.2
DDB1-222ENST00000543627 ZFP2Q6ZN57 461 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 SH2D6Q7Z4S9 175 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 FER1L6-AS1Q8NA97 138 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 NUDT10Q8NFP7 164 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 NUDT11Q96G61 164 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 RNASE7Q9H1E1 156 aaKnown RBP7.57□□□□□ -1.2
DDB1-222ENST00000543627 Q9UF83 564 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
DDB1-222ENST00000543627 DNAH2Q9P225 4427 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 TRAV9-2A0A087WT02 112 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 TRAV8-6A0A0B4J262 113 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 XKRY2A2RUG3 117 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 CRYGDP07320 174 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 MGPP08493 103 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 EVI2AP22794 236 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 KRTAP1-5Q9BYS1 174 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
DDB1-222ENST00000543627 C19orf71A6NCJ1 209 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 IGHV3-30P01768 117 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 IGHV3-33P01772 117 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 IGHV3-30-3P0DP02 117 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 IGHV3-30-5P0DP03 117 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 TNP2Q05952 138 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 TEX261Q6UWH6 196 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 LYPD6BQ8NI32 183 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 SMIM12Q96EX1 92 aa7.55□□□□□ -1.2
DDB1-222ENST00000543627 ZNF727A8MUV8 499 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 TMEM250H0YL14 139 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 K7EN84 100 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 SNAI2O43623 268 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 GATCO43716 136 aaKnown RBP7.54□□□□□ -1.2
DDB1-222ENST00000543627 CXCL1P09341 107 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 OR5AL1P0C617 328 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 LINC00315P59091 139 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 UFSP1Q6NVU6 142 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 LYZL1Q6UWQ5 148 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 FAM210AQ96ND0 272 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 SMIM7Q9BQ49 75 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 GTSF1LQ9H1H1 148 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 RPP21Q9H633 154 aaKnown RBP7.54□□□□□ -1.2
DDB1-222ENST00000543627 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
DDB1-222ENST00000543627 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
DDB1-222ENST00000543627 A0A1W2PPQ1 181 aa7.53□□□□□ -1.2
DDB1-222ENST00000543627 ERVFC1-1P60608 527 aa7.53□□□□□ -1.2
DDB1-222ENST00000543627 RPL36AP83881 106 aaKnown RBP7.53□□□□□ -1.2
DDB1-222ENST00000543627 LELP1Q5T871 98 aa7.53□□□□□ -1.2
DDB1-222ENST00000543627 RPL36ALQ969Q0 106 aaKnown RBP7.53□□□□□ -1.2
DDB1-222ENST00000543627 AP1S3Q96PC3 154 aa7.53□□□□□ -1.2
DDB1-222ENST00000543627 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
DDB1-222ENST00000543627 SRP19P09132 144 aaKnown RBP7.52□□□□□ -1.21
DDB1-222ENST00000543627 NTF3P20783 257 aa7.52□□□□□ -1.21
DDB1-222ENST00000543627 RAB4BP61018 213 aa7.52□□□□□ -1.21
DDB1-222ENST00000543627 CACNG7P62955 275 aa7.52□□□□□ -1.21
DDB1-222ENST00000543627 TWIST1Q15672 202 aa7.52□□□□□ -1.21
DDB1-222ENST00000543627 F2Z2F3 143 aa7.51□□□□□ -1.21
DDB1-222ENST00000543627 IGLC6P0CF74 106 aa7.51□□□□□ -1.21
DDB1-222ENST00000543627 PEA15Q15121 130 aa7.51□□□□□ -1.21
DDB1-222ENST00000543627 PGLYRP4Q96LB8 373 aa7.51□□□□□ -1.21
DDB1-222ENST00000543627 Q9HAA7 133 aa7.51□□□□□ -1.21
DDB1-222ENST00000543627 TRBV7-3A0A075B6L6 115 aa7.5□□□□□ -1.21
DDB1-222ENST00000543627 TMEM262E9PQX1 116 aa7.5□□□□□ -1.21
DDB1-222ENST00000543627 DNAH10OSP0CZ25 163 aa7.5□□□□□ -1.21
DDB1-222ENST00000543627 TIRAPP58753 221 aa7.5□□□□□ -1.21
DDB1-222ENST00000543627 SRSF3P84103 164 aaKnown RBP7.5□□□□□ -1.21
DDB1-222ENST00000543627 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.5□□□□□ -1.21
DDB1-222ENST00000543627 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
DDB1-222ENST00000543627 URGCP-MRPS24S4R325 110 aa7.5□□□□□ -1.21
DDB1-222ENST00000543627 DNAH17Q9UFH2 4485 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 TRBV10-1A0A0K0K1A3 114 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 A8MWL6 223 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 PSCAO43653 123 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 TRGC1P0CF51 173 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 RAB14P61106 215 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 TMEM241Q24JQ0 296 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 KCNIP4Q6PIL6 250 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 Q8N3U1 123 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 C10orf126Q8N4M7 172 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 BORCS7Q96B45 105 aa7.49□□□□□ -1.21
DDB1-222ENST00000543627 A0A087WWC5 75 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 C9JQL5 133 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 UBE2D3P61077 147 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 UBE2D2P62837 147 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 ADIRFQ15847 76 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 SUMO4Q6EEV6 95 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 SMIM15Q7Z3B0 74 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 LINC01551Q86U37 167 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 NFE4Q86UQ8 179 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 GTSF1Q8WW33 167 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
DDB1-222ENST00000543627 FAT2Q9NYQ8 4349 aa7.47□□□□□ -1.21
DDB1-222ENST00000543627 A0A087WX48 190 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms