RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 TMSB15BA0A087X1C1 80 aa13.59□□□□□ -0.23
DDB1-220ENST00000542337 BCL2L11O43521 198 aa13.59□□□□□ -0.23
DDB1-220ENST00000542337 LINC01559Q495D7 138 aa13.59□□□□□ -0.23
DDB1-220ENST00000542337 FAM74A4Q5TZK3 123 aa13.59□□□□□ -0.23
DDB1-220ENST00000542337 M0R381 172 aa13.58□□□□□ -0.24
DDB1-220ENST00000542337 GCSHP23434 173 aa13.58□□□□□ -0.24
DDB1-220ENST00000542337 LAGE3Q14657 143 aa13.58□□□□□ -0.24
DDB1-220ENST00000542337 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.24
DDB1-220ENST00000542337 ZFP82Q8N141 532 aa13.58□□□□□ -0.24
DDB1-220ENST00000542337 A0A1B0GV50 99 aa13.57□□□□□ -0.24
DDB1-220ENST00000542337 H2AFB1P0C5Y9 115 aa13.57□□□□□ -0.24
DDB1-220ENST00000542337 TOR2AQ5JU69 321 aa13.57□□□□□ -0.24
DDB1-220ENST00000542337 C14orf178Q8N769 122 aaPredicted RBP13.57□□□□□ -0.24
DDB1-220ENST00000542337 SFRP2Q96HF1 295 aa13.57□□□□□ -0.24
DDB1-220ENST00000542337 A0A087WWL8 130 aa13.56□□□□□ -0.24
DDB1-220ENST00000542337 IGLV5-52A0A0A0MRZ9 124 aa13.56□□□□□ -0.24
DDB1-220ENST00000542337 NTN5Q8WTR8 489 aaPredicted RBP13.56□□□□□ -0.24
DDB1-220ENST00000542337 URGCP-MRPS24S4R325 110 aa13.56□□□□□ -0.24
DDB1-220ENST00000542337 TRAV8-3A0A0A6YYJ7 113 aa13.55□□□□□ -0.24
DDB1-220ENST00000542337 EPM2AB3EWF7 344 aa13.55□□□□□ -0.24
DDB1-220ENST00000542337 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
DDB1-220ENST00000542337 KRTAP10-1P60331 282 aa13.55□□□□□ -0.24
DDB1-220ENST00000542337 BAGE2Q86Y30 109 aa13.55□□□□□ -0.24
DDB1-220ENST00000542337 LRCOL1A6NCL2 159 aa13.54□□□□□ -0.24
DDB1-220ENST00000542337 SCO2A0A1W2PP80 73 aa13.53□□□□□ -0.24
DDB1-220ENST00000542337 KCNIP4Q6PIL6 250 aa13.53□□□□□ -0.24
DDB1-220ENST00000542337 TMUB2Q71RG4 321 aa13.53□□□□□ -0.24
DDB1-220ENST00000542337 TRBV10-1A0A0K0K1A3 114 aa13.52□□□□□ -0.25
DDB1-220ENST00000542337 XGP55808 180 aa13.52□□□□□ -0.25
DDB1-220ENST00000542337 RPL36AP83881 106 aaKnown RBP13.52□□□□□ -0.25
DDB1-220ENST00000542337 Q8N814 137 aa13.52□□□□□ -0.25
DDB1-220ENST00000542337 RPL36ALQ969Q0 106 aaKnown RBP13.52□□□□□ -0.25
DDB1-220ENST00000542337 Q9UF83 564 aa13.52□□□□□ -0.25
DDB1-220ENST00000542337 TEX46H3BTG2 121 aa13.51□□□□□ -0.25
DDB1-220ENST00000542337 CXCL1P09341 107 aa13.51□□□□□ -0.25
DDB1-220ENST00000542337 EIF5AL1Q6IS14 154 aaKnown RBP13.51□□□□□ -0.25
DDB1-220ENST00000542337 COX11Q9Y6N1 276 aa13.51□□□□□ -0.25
DDB1-220ENST00000542337 RAB5CP51148 216 aa13.5□□□□□ -0.25
DDB1-220ENST00000542337 DAZ4Q86SG3 579 aaKnown RBP13.5□□□□□ -0.25
DDB1-220ENST00000542337 FRZBQ92765 325 aa13.5□□□□□ -0.25
DDB1-220ENST00000542337 RMI2Q96E14 147 aa13.5□□□□□ -0.25
DDB1-220ENST00000542337 MANBALQ9NQG1 85 aa13.5□□□□□ -0.25
DDB1-220ENST00000542337 DAZ3Q9NR90 486 aaKnown RBP13.5□□□□□ -0.25
DDB1-220ENST00000542337 TRBV7-3A0A075B6L6 115 aa13.49□□□□□ -0.25
DDB1-220ENST00000542337 RAB4BP61018 213 aa13.49□□□□□ -0.25
DDB1-220ENST00000542337 PRR27Q6MZM9 219 aa13.49□□□□□ -0.25
DDB1-220ENST00000542337 Q8N3U1 123 aa13.49□□□□□ -0.25
DDB1-220ENST00000542337 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.49□□□□□ -0.25
DDB1-220ENST00000542337 MLST8Q9BVC4 326 aa13.49□□□□□ -0.25
DDB1-220ENST00000542337 A0A087WX48 190 aa13.48□□□□□ -0.25
DDB1-220ENST00000542337 RPL19P84098 196 aaKnown RBP13.48□□□□□ -0.25
DDB1-220ENST00000542337 ELOBQ15370 118 aa13.48□□□□□ -0.25
DDB1-220ENST00000542337 SPANXN1Q5VSR9 72 aa13.48□□□□□ -0.25
DDB1-220ENST00000542337 GNG13Q9P2W3 67 aa13.48□□□□□ -0.25
DDB1-220ENST00000542337 ZNF56Q15929 161 aa13.47□□□□□ -0.25
DDB1-220ENST00000542337 NIT1Q86X76 327 aa13.47□□□□□ -0.25
DDB1-220ENST00000542337 TMEM70Q9BUB7 260 aa13.47□□□□□ -0.25
DDB1-220ENST00000542337 OR5AL1P0C617 328 aa13.46□□□□□ -0.25
DDB1-220ENST00000542337 RPL35P42766 123 aaKnown RBP13.46□□□□□ -0.25
DDB1-220ENST00000542337 OR10AG1Q8NH19 301 aa13.46□□□□□ -0.25
DDB1-220ENST00000542337 CHCHD7Q9BUK0 85 aa13.46□□□□□ -0.25
DDB1-220ENST00000542337 TRAV1-1A0A0B4J248 108 aa13.45□□□□□ -0.26
DDB1-220ENST00000542337 F5H697 171 aa13.45□□□□□ -0.26
DDB1-220ENST00000542337 SNAI2O43623 268 aa13.45□□□□□ -0.26
DDB1-220ENST00000542337 SMIM17P0DL12 118 aa13.45□□□□□ -0.26
DDB1-220ENST00000542337 UBE2D3P61077 147 aa13.45□□□□□ -0.26
DDB1-220ENST00000542337 UBE2D2P62837 147 aa13.45□□□□□ -0.26
DDB1-220ENST00000542337 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
DDB1-220ENST00000542337 SSBP4Q9BWG4 385 aaPredicted RBP13.45□□□□□ -0.26
DDB1-220ENST00000542337 TMEM262E9PQX1 116 aa13.44□□□□□ -0.26
DDB1-220ENST00000542337 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
DDB1-220ENST00000542337 KLK12Q9UKR0 248 aa13.44□□□□□ -0.26
DDB1-220ENST00000542337 SSTP61278 116 aa13.43□□□□□ -0.26
DDB1-220ENST00000542337 CCL20P78556 96 aa13.43□□□□□ -0.26
DDB1-220ENST00000542337 Q5VSD8 79 aa13.43□□□□□ -0.26
DDB1-220ENST00000542337 C11orf52Q96A22 123 aa13.43□□□□□ -0.26
DDB1-220ENST00000542337 IGKV2D-24A0A075B6R9 120 aa13.42□□□□□ -0.26
DDB1-220ENST00000542337 MUC21A0A0G2JKD1 596 aa13.42□□□□□ -0.26
DDB1-220ENST00000542337 MUC21A0A140T8X8 626 aa13.42□□□□□ -0.26
DDB1-220ENST00000542337 FAM229AH3BQW9 127 aa13.42□□□□□ -0.26
DDB1-220ENST00000542337 INAFM2P0DMQ5 153 aa13.42□□□□□ -0.26
DDB1-220ENST00000542337 UBE2WQ96B02 151 aa13.42□□□□□ -0.26
DDB1-220ENST00000542337 LECT2O14960 151 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 IFNA1P01562 189 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 C1QBP02746 253 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
DDB1-220ENST00000542337 RPS20P60866 119 aaKnown RBP13.41□□□□□ -0.26
DDB1-220ENST00000542337 PKIAP61925 76 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 Q0VG73 95 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 CENPWQ5EE01 88 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 NEXN-AS1Q8NBZ9 246 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 BAALCQ8WXS3 180 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 AP1S3Q96PC3 154 aa13.41□□□□□ -0.26
DDB1-220ENST00000542337 TRBV6-8A0A0A6YYG3 113 aa13.4□□□□□ -0.26
DDB1-220ENST00000542337 RBFOX3A6NFN3 312 aa13.4□□□□□ -0.26
DDB1-220ENST00000542337 PDE6DO43924 150 aa13.4□□□□□ -0.26
DDB1-220ENST00000542337 SULT1A2P50226 295 aa13.4□□□□□ -0.26
DDB1-220ENST00000542337 TMEM97Q5BJF2 176 aa13.4□□□□□ -0.26
DDB1-220ENST00000542337 Q8N976 141 aa13.4□□□□□ -0.26
DDB1-220ENST00000542337 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms