RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 Q6ZS92 163 aa12.02□□□□□ -0.48
HMGA2-210ENST00000541363 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.48
HMGA2-210ENST00000541363 DSCAML1Q8TD84 2053 aa12.02□□□□□ -0.48
HMGA2-210ENST00000541363 ATP5EP56381 51 aaPredicted RBP12.02□□□□□ -0.49
HMGA2-210ENST00000541363 IGLV3-9A0A075B6K5 115 aa12.02□□□□□ -0.49
HMGA2-210ENST00000541363 K7EN84 100 aa12.02□□□□□ -0.49
HMGA2-210ENST00000541363 WT1-ASQ06250 92 aa12.02□□□□□ -0.49
HMGA2-210ENST00000541363 WFDC2Q14508 124 aa12.02□□□□□ -0.49
HMGA2-210ENST00000541363 A6NED7 52 aa12.02□□□□□ -0.49
HMGA2-210ENST00000541363 LOXP28300 417 aaPredicted RBP12.02□□□□□ -0.49
HMGA2-210ENST00000541363 RNF144BQ7Z419 303 aa12.02□□□□□ -0.49
HMGA2-210ENST00000541363 LINC00643Q86TS7 51 aa12.01□□□□□ -0.49
HMGA2-210ENST00000541363 COL5A3P25940 1745 aaPredicted RBP12.01□□□□□ -0.49
HMGA2-210ENST00000541363 WFDC11Q8NEX6 87 aa12.01□□□□□ -0.49
HMGA2-210ENST00000541363 IGKV1-6A0A0C4DH72 117 aa12.01□□□□□ -0.49
HMGA2-210ENST00000541363 PCDH15Q96QU1 1955 aa12.01□□□□□ -0.49
HMGA2-210ENST00000541363 ZNF491Q8N8L2 437 aa12□□□□□ -0.49
HMGA2-210ENST00000541363 NCOA6Q14686 2063 aaPredicted RBP12□□□□□ -0.49
HMGA2-210ENST00000541363 B3GALT5-AS1P59052 145 aa12□□□□□ -0.49
HMGA2-210ENST00000541363 C10orf91Q5T1B1 145 aa12□□□□□ -0.49
HMGA2-210ENST00000541363 TNCP24821 2201 aa12□□□□□ -0.49
HMGA2-210ENST00000541363 SPTAN1Q13813 2472 aaKnown RBP11.99□□□□□ -0.49
HMGA2-210ENST00000541363 DEFB136Q30KP8 78 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 ALPK3Q96L96 1907 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 IGHV1-58A0A0C4DH39 117 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 TOMM6Q96B49 74 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 SLURP1P55000 103 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 FOXL2NBQ6ZUU3 175 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 VWA8A3KMH1 1905 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 HIST2H2BDQ6DRA6 164 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
HMGA2-210ENST00000541363 G3V4G9 280 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 MIR7-3HGQ8N6C7 128 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
HMGA2-210ENST00000541363 COL11A2P13942 1736 aaPredicted RBP11.98□□□□□ -0.49
HMGA2-210ENST00000541363 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 HIGD1BQ9P298 99 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 AGRNO00468 2067 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 KIAA1549Q9HCM3 1950 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 UQCRQO14949 82 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 Q8N1Y9 231 aa11.98□□□□□ -0.49
HMGA2-210ENST00000541363 C16orf54Q6UWD8 224 aa11.97□□□□□ -0.49
HMGA2-210ENST00000541363 C11orf86A6NJI1 115 aa11.97□□□□□ -0.49
HMGA2-210ENST00000541363 ZSWIM8A7E2V4 1837 aa11.97□□□□□ -0.49
HMGA2-210ENST00000541363 LYPD6Q86Y78 171 aa11.97□□□□□ -0.49
HMGA2-210ENST00000541363 MED13Q9UHV7 2174 aa11.97□□□□□ -0.49
HMGA2-210ENST00000541363 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.49
HMGA2-210ENST00000541363 IL17DQ8TAD2 202 aa11.96□□□□□ -0.49
HMGA2-210ENST00000541363 ESM1Q9NQ30 184 aa11.96□□□□□ -0.49
HMGA2-210ENST00000541363 KLK12Q9UKR0 248 aa11.96□□□□□ -0.49
HMGA2-210ENST00000541363 J3QKU1 62 aa11.96□□□□□ -0.5
HMGA2-210ENST00000541363 E9PLD3 99 aa11.96□□□□□ -0.5
HMGA2-210ENST00000541363 C20orf197Q8N268 126 aa11.95□□□□□ -0.5
HMGA2-210ENST00000541363 LRCOL1A6NCL2 159 aa11.95□□□□□ -0.5
HMGA2-210ENST00000541363 NDUFC1O43677 76 aa11.95□□□□□ -0.5
HMGA2-210ENST00000541363 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
HMGA2-210ENST00000541363 VWCEQ96DN2 955 aa11.95□□□□□ -0.5
HMGA2-210ENST00000541363 FXYD2P54710 66 aa11.94□□□□□ -0.5
HMGA2-210ENST00000541363 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
HMGA2-210ENST00000541363 KIF26AQ9ULI4 1882 aaPredicted RBP11.94□□□□□ -0.5
HMGA2-210ENST00000541363 TRAV26-1A0A087WT03 109 aa11.94□□□□□ -0.5
HMGA2-210ENST00000541363 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
HMGA2-210ENST00000541363 K7ENP7 123 aa11.94□□□□□ -0.5
HMGA2-210ENST00000541363 PKDREJQ9NTG1 2253 aa11.93□□□□□ -0.5
HMGA2-210ENST00000541363 C15orf65H3BRN8 121 aa11.93□□□□□ -0.5
HMGA2-210ENST00000541363 RPL39P62891 51 aaKnown RBP11.93□□□□□ -0.5
HMGA2-210ENST00000541363 ATP5EP2Q5VTU8 51 aa11.93□□□□□ -0.5
HMGA2-210ENST00000541363 C10orf105Q8TEF2 133 aa11.93□□□□□ -0.5
HMGA2-210ENST00000541363 SDIM1Q6ZPB5 146 aa11.93□□□□□ -0.5
HMGA2-210ENST00000541363 SPRY2O43597 315 aa11.93□□□□□ -0.5
HMGA2-210ENST00000541363 HIGD2AQ9BW72 106 aa11.92□□□□□ -0.5
HMGA2-210ENST00000541363 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
HMGA2-210ENST00000541363 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
HMGA2-210ENST00000541363 TNS1Q9HBL0 1735 aaKnown RBP11.91□□□□□ -0.5
HMGA2-210ENST00000541363 PCNX1Q96RV3 2341 aa11.91□□□□□ -0.5
HMGA2-210ENST00000541363 FNDC1Q4ZHG4 1894 aaPredicted RBP11.91□□□□□ -0.5
HMGA2-210ENST00000541363 IGKV2-24A0A0C4DH68 120 aa11.9□□□□□ -0.5
HMGA2-210ENST00000541363 MIAQ16674 131 aa11.9□□□□□ -0.5
HMGA2-210ENST00000541363 UFSP1Q6NVU6 142 aa11.9□□□□□ -0.5
HMGA2-210ENST00000541363 CTSGP08311 255 aa11.9□□□□□ -0.5
HMGA2-210ENST00000541363 DIAPH2-AS1Q14236 149 aa11.9□□□□□ -0.5
HMGA2-210ENST00000541363 ENHOQ6UWT2 76 aa11.89□□□□□ -0.51
HMGA2-210ENST00000541363 TMEM263Q8WUH6 116 aaKnown RBP11.89□□□□□ -0.51
HMGA2-210ENST00000541363 FAM19A1Q7Z5A9 133 aa11.89□□□□□ -0.51
HMGA2-210ENST00000541363 NFE4Q86UQ8 179 aa11.89□□□□□ -0.51
HMGA2-210ENST00000541363 A0A087WZ39 114 aa11.88□□□□□ -0.51
HMGA2-210ENST00000541363 EXPH5Q8NEV8 1989 aa11.88□□□□□ -0.51
HMGA2-210ENST00000541363 IGLC6P0CF74 106 aa11.88□□□□□ -0.51
HMGA2-210ENST00000541363 UBE2D1P51668 147 aa11.88□□□□□ -0.51
HMGA2-210ENST00000541363 Q6ZR03 302 aa11.88□□□□□ -0.51
HMGA2-210ENST00000541363 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
HMGA2-210ENST00000541363 IGHV4-30-2A0A087WSY4 118 aa11.87□□□□□ -0.51
HMGA2-210ENST00000541363 IGKV1-17P01599 117 aa11.87□□□□□ -0.51
HMGA2-210ENST00000541363 MED14OSP0DP75 135 aa11.87□□□□□ -0.51
HMGA2-210ENST00000541363 Q8N9W7 124 aa11.87□□□□□ -0.51
HMGA2-210ENST00000541363 KAAG1Q9UBP8 84 aa11.87□□□□□ -0.51
HMGA2-210ENST00000541363 IGKV1D-37A0A075B6S9 117 aa11.87□□□□□ -0.51
HMGA2-210ENST00000541363 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms