RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 IGHV3-30-5P0DP03 117 aa14.06□□□□□ -0.16
CHFR-217ENST00000540537 C14orf178Q8N769 122 aaPredicted RBP14.06□□□□□ -0.16
CHFR-217ENST00000540537 SFRP2Q96HF1 295 aa14.06□□□□□ -0.16
CHFR-217ENST00000540537 TMSB15BA0A087X1C1 80 aa14.05□□□□□ -0.16
CHFR-217ENST00000540537 A0A1B0GV50 99 aa14.05□□□□□ -0.16
CHFR-217ENST00000540537 LAGE3Q14657 143 aa14.05□□□□□ -0.16
CHFR-217ENST00000540537 ZFP82Q8N141 532 aa14.05□□□□□ -0.16
CHFR-217ENST00000540537 SCO2A0A1W2PP80 73 aa14.04□□□□□ -0.16
CHFR-217ENST00000540537 LRCOL1A6NCL2 159 aa14.04□□□□□ -0.16
CHFR-217ENST00000540537 H2AFB1P0C5Y9 115 aa14.04□□□□□ -0.16
CHFR-217ENST00000540537 FAM74A4Q5TZK3 123 aa14.04□□□□□ -0.16
CHFR-217ENST00000540537 Q9HAA7 133 aa14.04□□□□□ -0.16
CHFR-217ENST00000540537 Q9UF83 564 aa14.04□□□□□ -0.16
CHFR-217ENST00000540537 A0A087WWC5 75 aa14.03□□□□□ -0.16
CHFR-217ENST00000540537 M0R381 172 aa14.03□□□□□ -0.16
CHFR-217ENST00000540537 A0A087WWL8 130 aa14.02□□□□□ -0.17
CHFR-217ENST00000540537 KRTAP10-1P60331 282 aa14.02□□□□□ -0.17
CHFR-217ENST00000540537 TMUB2Q71RG4 321 aa14.02□□□□□ -0.17
CHFR-217ENST00000540537 MLST8Q9BVC4 326 aa14.02□□□□□ -0.17
CHFR-217ENST00000540537 CXCL1P09341 107 aa14.01□□□□□ -0.17
CHFR-217ENST00000540537 BAGE2Q86Y30 109 aa14.01□□□□□ -0.17
CHFR-217ENST00000540537 NTN5Q8WTR8 489 aaPredicted RBP14.01□□□□□ -0.17
CHFR-217ENST00000540537 GCSHP23434 173 aa14□□□□□ -0.17
CHFR-217ENST00000540537 Q8N3U1 123 aa14□□□□□ -0.17
CHFR-217ENST00000540537 TM2D2Q9BX73 214 aa14□□□□□ -0.17
CHFR-217ENST00000540537 TRBV10-1A0A0K0K1A3 114 aa13.99□□□□□ -0.17
CHFR-217ENST00000540537 XGP55808 180 aa13.99□□□□□ -0.17
CHFR-217ENST00000540537 RPL19P84098 196 aaKnown RBP13.98□□□□□ -0.17
CHFR-217ENST00000540537 TOR2AQ5JU69 321 aa13.98□□□□□ -0.17
CHFR-217ENST00000540537 MANBALQ9NQG1 85 aa13.98□□□□□ -0.17
CHFR-217ENST00000540537 IGLV5-52A0A0A0MRZ9 124 aa13.97□□□□□ -0.17
CHFR-217ENST00000540537 TRAV8-3A0A0A6YYJ7 113 aa13.97□□□□□ -0.17
CHFR-217ENST00000540537 TRAV1-1A0A0B4J248 108 aa13.97□□□□□ -0.17
CHFR-217ENST00000540537 RAB5CP51148 216 aa13.97□□□□□ -0.17
CHFR-217ENST00000540537 Q8N814 137 aa13.97□□□□□ -0.17
CHFR-217ENST00000540537 SNAI2O43623 268 aa13.96□□□□□ -0.17
CHFR-217ENST00000540537 RPL36AP83881 106 aaKnown RBP13.96□□□□□ -0.17
CHFR-217ENST00000540537 EIF5AL1Q6IS14 154 aaKnown RBP13.96□□□□□ -0.17
CHFR-217ENST00000540537 DAZ4Q86SG3 579 aaKnown RBP13.96□□□□□ -0.17
CHFR-217ENST00000540537 RPL36ALQ969Q0 106 aaKnown RBP13.96□□□□□ -0.17
CHFR-217ENST00000540537 C11orf52Q96A22 123 aa13.96□□□□□ -0.17
CHFR-217ENST00000540537 DAZ3Q9NR90 486 aaKnown RBP13.96□□□□□ -0.17
CHFR-217ENST00000540537 EPM2AB3EWF7 344 aa13.95□□□□□ -0.18
CHFR-217ENST00000540537 OR5AL1P0C617 328 aa13.95□□□□□ -0.18
CHFR-217ENST00000540537 RPL35P42766 123 aaKnown RBP13.95□□□□□ -0.18
CHFR-217ENST00000540537 CCL20P78556 96 aa13.95□□□□□ -0.18
CHFR-217ENST00000540537 PRR27Q6MZM9 219 aa13.95□□□□□ -0.18
CHFR-217ENST00000540537 NIT1Q86X76 327 aa13.95□□□□□ -0.18
CHFR-217ENST00000540537 OR10AG1Q8NH19 301 aa13.95□□□□□ -0.18
CHFR-217ENST00000540537 SSBP4Q9BWG4 385 aaPredicted RBP13.95□□□□□ -0.18
CHFR-217ENST00000540537 GNG13Q9P2W3 67 aa13.95□□□□□ -0.18
CHFR-217ENST00000540537 VPS13BQ7Z7G8 4022 aa13.94□□□□□ -0.18
CHFR-217ENST00000540537 TRBV7-3A0A075B6L6 115 aa13.94□□□□□ -0.18
CHFR-217ENST00000540537 RAB4BP61018 213 aa13.94□□□□□ -0.18
CHFR-217ENST00000540537 UBE2D3P61077 147 aa13.94□□□□□ -0.18
CHFR-217ENST00000540537 UBE2D2P62837 147 aa13.94□□□□□ -0.18
CHFR-217ENST00000540537 OR10G8Q8NGN5 311 aa13.94□□□□□ -0.18
CHFR-217ENST00000540537 URGCP-MRPS24S4R325 110 aa13.94□□□□□ -0.18
CHFR-217ENST00000540537 FAT1Q14517 4588 aa13.93□□□□□ -0.18
CHFR-217ENST00000540537 TEX46H3BTG2 121 aa13.92□□□□□ -0.18
CHFR-217ENST00000540537 ZNF56Q15929 161 aa13.92□□□□□ -0.18
CHFR-217ENST00000540537 TCTE3Q8IZS6 198 aa13.92□□□□□ -0.18
CHFR-217ENST00000540537 CHCHD7Q9BUK0 85 aa13.92□□□□□ -0.18
CHFR-217ENST00000540537 DERL1Q9BUN8 251 aa13.92□□□□□ -0.18
CHFR-217ENST00000540537 COX11Q9Y6N1 276 aa13.92□□□□□ -0.18
CHFR-217ENST00000540537 SULT1A2P50226 295 aa13.91□□□□□ -0.18
CHFR-217ENST00000540537 SPANXN1Q5VSR9 72 aa13.91□□□□□ -0.18
CHFR-217ENST00000540537 TMEM70Q9BUB7 260 aa13.91□□□□□ -0.18
CHFR-217ENST00000540537 DNAH8Q96JB1 4490 aa13.91□□□□□ -0.18
CHFR-217ENST00000540537 WFDC2Q14508 124 aa13.9□□□□□ -0.18
CHFR-217ENST00000540537 RMI2Q96E14 147 aa13.9□□□□□ -0.18
CHFR-217ENST00000540537 ELOBQ15370 118 aa13.89□□□□□ -0.19
CHFR-217ENST00000540537 CENPWQ5EE01 88 aa13.89□□□□□ -0.19
CHFR-217ENST00000540537 NEXN-AS1Q8NBZ9 246 aa13.89□□□□□ -0.19
CHFR-217ENST00000540537 A0A087WX48 190 aa13.88□□□□□ -0.19
CHFR-217ENST00000540537 MUC21A0A0G2JKD1 596 aa13.88□□□□□ -0.19
CHFR-217ENST00000540537 MUC21A0A140T8X8 626 aa13.88□□□□□ -0.19
CHFR-217ENST00000540537 KCNIP4Q6PIL6 250 aa13.88□□□□□ -0.19
CHFR-217ENST00000540537 FRZBQ92765 325 aa13.88□□□□□ -0.19
CHFR-217ENST00000540537 SMIM12Q96EX1 92 aa13.88□□□□□ -0.19
CHFR-217ENST00000540537 KLK12Q9UKR0 248 aa13.88□□□□□ -0.19
CHFR-217ENST00000540537 PDE6DO43924 150 aa13.87□□□□□ -0.19
CHFR-217ENST00000540537 IFNA1P01562 189 aa13.87□□□□□ -0.19
CHFR-217ENST00000540537 IGLV2-8P01709 118 aa13.87□□□□□ -0.19
CHFR-217ENST00000540537 MEF2BQ02080 365 aaPredicted RBP13.87□□□□□ -0.19
CHFR-217ENST00000540537 Q5VSD8 79 aa13.87□□□□□ -0.19
CHFR-217ENST00000540537 SLC51BQ86UW2 128 aa13.87□□□□□ -0.19
CHFR-217ENST00000540537 AP1S3Q96PC3 154 aa13.87□□□□□ -0.19
CHFR-217ENST00000540537 TRBV6-8A0A0A6YYG3 113 aa13.86□□□□□ -0.19
CHFR-217ENST00000540537 C1QBP02746 253 aa13.86□□□□□ -0.19
CHFR-217ENST00000540537 SMIM17P0DL12 118 aa13.86□□□□□ -0.19
CHFR-217ENST00000540537 RPS20P60866 119 aaKnown RBP13.86□□□□□ -0.19
CHFR-217ENST00000540537 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.86□□□□□ -0.19
CHFR-217ENST00000540537 DAZAP1Q96EP5 407 aaKnown RBP13.86□□□□□ -0.19
CHFR-217ENST00000540537 KIF25-AS1Q9Y6Z4 181 aa13.86□□□□□ -0.19
CHFR-217ENST00000540537 C19orf71A6NCJ1 209 aa13.85□□□□□ -0.19
CHFR-217ENST00000540537 F5H697 171 aa13.85□□□□□ -0.19
CHFR-217ENST00000540537 GNG4P50150 75 aa13.85□□□□□ -0.19
CHFR-217ENST00000540537 UBE2WQ96B02 151 aa13.85□□□□□ -0.19
CHFR-217ENST00000540537 IGKV2D-24A0A075B6R9 120 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms