RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 MUSTN1Q8IVN3 82 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 NDUFA4L2Q9NRX3 87 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 NDUFB1O75438 58 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 GATA1P15976 413 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-214ENST00000540109 RPL36AP83881 106 aaKnown RBP4.72□□□□□ -1.65
PTPRD-214ENST00000540109 RPL36ALQ969Q0 106 aaKnown RBP4.72□□□□□ -1.65
PTPRD-214ENST00000540109 ICOSQ9Y6W8 199 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 INTS1Q8N201 2190 aaKnown RBP4.72□□□□□ -1.65
PTPRD-214ENST00000540109 TANC2Q9HCD6 1990 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 FAM222AQ5U5X8 452 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 USMG5Q96IX5 58 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 PRSS22Q9GZN4 317 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 RTTNQ86VV8 2226 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 LGALS9O00182 355 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 CCL3L1P16619 93 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 COL8A2P25067 703 aa4.71□□□□□ -1.65
PTPRD-214ENST00000540109 Q6ZQT7 251 aa4.71□□□□□ -1.66
PTPRD-214ENST00000540109 ZNF503Q96F45 646 aa4.71□□□□□ -1.66
PTPRD-214ENST00000540109 H3BRN7 92 aa4.71□□□□□ -1.66
PTPRD-214ENST00000540109 Q8N976 141 aa4.71□□□□□ -1.66
PTPRD-214ENST00000540109 LAMA3Q16787 3333 aa4.71□□□□□ -1.66
PTPRD-214ENST00000540109 NDUFA11Q86Y39 141 aa4.71□□□□□ -1.66
PTPRD-214ENST00000540109 FAM223BA6NKX1 122 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-214ENST00000540109 ZNF876PQ49A33 203 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 FAM223AQ8IWN6 122 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 FXYD5Q96DB9 178 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 IGHV3-73A0A0B4J1V6 119 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 RPL18AQ02543 176 aaKnown RBP4.7□□□□□ -1.66
PTPRD-214ENST00000540109 PRIMA1Q86XR5 153 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 SLC25A29Q8N8R3 303 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 PTPRZ1P23471 2315 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-214ENST00000540109 SPTBN5Q9NRC6 3674 aaKnown RBP4.7□□□□□ -1.66
PTPRD-214ENST00000540109 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 SPRNQ5BIV9 151 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 A0A087WWL8 130 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 MRPS12O15235 138 aaKnown RBP4.7□□□□□ -1.66
PTPRD-214ENST00000540109 GDF5OSQ5U4N7 250 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 Q6JHZ5 121 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 SOSTDC1Q6X4U4 206 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 A0A0J9YX75 114 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 C19orf71A6NCJ1 209 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 MP68P56378 58 aa4.7□□□□□ -1.66
PTPRD-214ENST00000540109 TMEM89A2RUT3 159 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 CLPSL1A2RUU4 121 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 TRBV10-3A0A0K0K1G6 114 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 LRCOL1A6NCL2 159 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 VPREB1P12018 145 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 LINC00310P59036 64 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 TOMM6Q96B49 74 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 IGHV1OR15-1A0A075B7D0 117 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 H3BUA1 57 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 UBE2BP63146 152 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 Q8N7P7 452 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 IGKV2D-26A0A0A0MRZ7 120 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 IGLV1-47P01700 117 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 U3KQK5 164 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 TTC28Q96AY4 2481 aa4.69□□□□□ -1.66
PTPRD-214ENST00000540109 BUB1B-PAK6H3BSN5 160 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 COX7A2LO14548 114 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 WIPF1O43516 503 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 STHQ8IWL8 128 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 CTSZQ9UBR2 303 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 TRBV7-7A0A0K0K1E9 115 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 F8WEM9 126 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 TMEM256-PLSCR3K7ERE1 68 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 LINC01587Q99440 93 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 DIAPH2-AS1Q14236 149 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 WFDC9Q8NEX5 89 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 YLPM1P49750 1951 aaKnown RBP4.68□□□□□ -1.66
PTPRD-214ENST00000540109 IGLV2-23P01705 113 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 CFHR4Q92496 578 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 C22orf34Q6ZV56 151 aa4.68□□□□□ -1.66
PTPRD-214ENST00000540109 FAM186AA6NE01 2351 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 IGHV1-3A0A0C4DH29 117 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 ELANEP08246 267 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 MAPKAPK5-AS1Q8N8E1 139 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 AJUBAQ96IF1 538 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 SZT2Q5T011 3432 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 SERTAD4-AS1Q5TG53 156 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 CUL9Q8IWT3 2517 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 IGKV1-16P04430 117 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 C11orf71Q6IPW1 123 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 LYPD2Q6UXB3 125 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 CLEC19AQ6UXS0 136 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 ADORA2A-AS1P86434 159 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
PTPRD-214ENST00000540109 NPBQ8NG41 125 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 TPRP12270 2363 aaKnown RBP4.67□□□□□ -1.66
PTPRD-214ENST00000540109 SNURFQ9Y675 71 aa4.67□□□□□ -1.66
PTPRD-214ENST00000540109 DSCAML1Q8TD84 2053 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 NXPH4O95158 308 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 SUMO4Q6EEV6 95 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 LINC01560Q8TB33 94 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 CDIP1Q9H305 208 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 MSRB1Q9NZV6 116 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 RAI1Q7Z5J4 1906 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-214ENST00000540109 SRRM4A7MD48 611 aaKnown RBP4.66□□□□□ -1.66
PTPRD-214ENST00000540109 LY6LH3BQJ8 138 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms