RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IGLV1-44P01699 117 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 SMCPP49901 116 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-213ENST00000537002 UBE2E1P51965 193 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 URB1O60287 2271 aaKnown RBP4.16□□□□□ -1.74
PTPRD-213ENST00000537002 WNK2Q9Y3S1 2297 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 TET2Q6N021 2002 aaPredicted RBP4.15□□□□□ -1.74
PTPRD-213ENST00000537002 ZNF672Q499Z4 452 aaPredicted RBP4.15□□□□□ -1.74
PTPRD-213ENST00000537002 C6orf226Q5I0X4 101 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 Q9H8V8 135 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 BRWD1Q9NSI6 2320 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 TRGV4A0A0C4DH28 118 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 A0A0J9YY99 117 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 I3L2K1 104 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 COX7CP15954 63 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 BRK1Q8WUW1 75 aa4.15□□□□□ -1.74
PTPRD-213ENST00000537002 GNLYP22749 145 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 RPL36AP83881 106 aaKnown RBP4.15□□□□□ -1.75
PTPRD-213ENST00000537002 RPL36ALQ969Q0 106 aaKnown RBP4.15□□□□□ -1.75
PTPRD-213ENST00000537002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-213ENST00000537002 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-213ENST00000537002 MRPS12O15235 138 aaKnown RBP4.15□□□□□ -1.75
PTPRD-213ENST00000537002 NXPH4O95158 308 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 SPINK13Q1W4C9 94 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 CCL19Q99731 98 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 DOCK10Q96BY6 2186 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 LY6HO94772 140 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 MAP1BP46821 2468 aaKnown RBP4.15□□□□□ -1.75
PTPRD-213ENST00000537002 IGLV2-23P01705 113 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 IGHV3-33P01772 117 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 RHOHQ15669 191 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 OPRPNQ99935 248 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-213ENST00000537002 PKIGQ9Y2B9 76 aa4.15□□□□□ -1.75
PTPRD-213ENST00000537002 LINC00694P0DN24 101 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 C10orf105Q8TEF2 133 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 RNF185Q96GF1 192 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 ADAMTS20P59510 1910 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 IGLV3-9A0A075B6K5 115 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 TRAV13-2A0A0B4J235 113 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 A0A1W2PRX2 142 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 IGKV1-17P01599 117 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 IGHV1-69P01742 117 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 IGHV3-30P01768 117 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 IGHV3-30-5P0DP03 117 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 ZNF80P51504 273 aaPredicted RBP4.14□□□□□ -1.75
PTPRD-213ENST00000537002 FAM222AQ5U5X8 452 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 C1orf229Q6ZS94 237 aaPredicted RBP4.14□□□□□ -1.75
PTPRD-213ENST00000537002 STHQ8IWL8 128 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 IGLV2-18A0A075B6J9 118 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 IGHV1OR15-1A0A075B7D0 117 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 hADV29S1A0JD25 119 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 GATA3P23771 443 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 ATP5EP2Q5VTU8 51 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 BRD3OSQ6XYD6 125 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 PTPRBP23467 1997 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 FAM223BA6NKX1 122 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 TIMM17BO60830 172 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 NDUFC2O95298 119 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 GHRHP01286 108 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 FAM223AQ8IWN6 122 aa4.14□□□□□ -1.75
PTPRD-213ENST00000537002 SDIM1Q6ZPB5 146 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 PPDPFQ9H3Y8 114 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 Q9HAA7 133 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 OOSP1A8MZH6 123 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 DAZ1Q9NQZ3 744 aaKnown RBP4.13□□□□□ -1.75
PTPRD-213ENST00000537002 KAAG1Q9UBP8 84 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 PRB2P02812 416 aaPredicted RBP4.13□□□□□ -1.75
PTPRD-213ENST00000537002 DSCR9P59020 149 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 A0A0U1RQV1 116 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 ORMDL1Q9P0S3 153 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 K7EIM0 57 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 MRPS36P82909 103 aaKnown RBP4.13□□□□□ -1.75
PTPRD-213ENST00000537002 PLCE1Q9P212 2302 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 PSMB8P28062 276 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 PSMG3-AS1Q96PY0 264 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 C14orf132Q9NPU4 83 aa4.13□□□□□ -1.75
PTPRD-213ENST00000537002 INSP01308 110 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 IGHG2P01859 326 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 UBE2E2Q96LR5 201 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 IGHV4OR15-8A0A075B7B6 117 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 A0A087WW49 117 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 HTN3P15516 51 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 MINOS1Q5TGZ0 78 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 MINOS1-NBL1R4GNA1 71 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 NRACQ8N912 160 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 MBD3L4A6NDZ8 208 aaPredicted RBP4.12□□□□□ -1.75
PTPRD-213ENST00000537002 MBD3L3A6NE82 208 aaPredicted RBP4.12□□□□□ -1.75
PTPRD-213ENST00000537002 MBD3L5A6NJ08 208 aaPredicted RBP4.12□□□□□ -1.75
PTPRD-213ENST00000537002 PF4P02776 101 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 IGFL3Q6UXB1 125 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 MBD3L2Q8NHZ7 208 aaPredicted RBP4.12□□□□□ -1.75
PTPRD-213ENST00000537002 ODF3Q96PU9 254 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 CTSZQ9UBR2 303 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 LY6G6EA0A0G2JKS1 128 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 U3KQA8 63 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 LST1O00453 97 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 ATP5J2P56134 94 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 RUSC1-AS1Q66K80 236 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 PRORYQ9H606 182 aa4.12□□□□□ -1.75
PTPRD-213ENST00000537002 ZNF318Q5VUA4 2279 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 TRIAP1O43715 76 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms