RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FHITP49789 147 aa13.05□□□□□ -0.32
TNFRSF1B-204ENST00000536782 WFDC2Q14508 124 aa13.05□□□□□ -0.32
TNFRSF1B-204ENST00000536782 JPT2Q9H910 190 aa13.05□□□□□ -0.32
TNFRSF1B-204ENST00000536782 B4DEV8 164 aa13.04□□□□□ -0.32
TNFRSF1B-204ENST00000536782 PEX7O00628 323 aa13.04□□□□□ -0.32
TNFRSF1B-204ENST00000536782 UFSP1Q6NVU6 142 aa13.04□□□□□ -0.32
TNFRSF1B-204ENST00000536782 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1B-204ENST00000536782 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
TNFRSF1B-204ENST00000536782 SAMD10Q9BYL1 202 aa13.04□□□□□ -0.32
TNFRSF1B-204ENST00000536782 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1B-204ENST00000536782 H3BVH4 76 aa13.03□□□□□ -0.32
TNFRSF1B-204ENST00000536782 Q86TA4 180 aa13.03□□□□□ -0.32
TNFRSF1B-204ENST00000536782 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1B-204ENST00000536782 SYT8Q8NBV8 401 aa13.03□□□□□ -0.32
TNFRSF1B-204ENST00000536782 Q9UF83 564 aa13.03□□□□□ -0.32
TNFRSF1B-204ENST00000536782 RHODO00212 210 aa13.02□□□□□ -0.33
TNFRSF1B-204ENST00000536782 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.33
TNFRSF1B-204ENST00000536782 EIF5AL1Q6IS14 154 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1B-204ENST00000536782 SFT2D1Q8WV19 159 aa13.02□□□□□ -0.33
TNFRSF1B-204ENST00000536782 COX11Q9Y6N1 276 aa13.02□□□□□ -0.33
TNFRSF1B-204ENST00000536782 KRBOX1C9JBD0 128 aa13.01□□□□□ -0.33
TNFRSF1B-204ENST00000536782 LECT2O14960 151 aa13.01□□□□□ -0.33
TNFRSF1B-204ENST00000536782 ARMS2P0C7Q2 107 aa13.01□□□□□ -0.33
TNFRSF1B-204ENST00000536782 RAB5CP51148 216 aa13.01□□□□□ -0.33
TNFRSF1B-204ENST00000536782 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
TNFRSF1B-204ENST00000536782 AKAP14Q86UN6 197 aa13.01□□□□□ -0.33
TNFRSF1B-204ENST00000536782 URGCP-MRPS24S4R325 110 aa13.01□□□□□ -0.33
TNFRSF1B-204ENST00000536782 M0R036 132 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 CRIP1P50238 77 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 FAM74A4Q5TZK3 123 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 CST9LP1Q5W188 147 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 Q6ZSA8 131 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 ZC2HC1AQ96GY0 325 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 ZFP30Q9Y2G7 519 aa13□□□□□ -0.33
TNFRSF1B-204ENST00000536782 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1B-204ENST00000536782 SH2D1AO60880 128 aa12.99□□□□□ -0.33
TNFRSF1B-204ENST00000536782 BAALCQ8WXS3 180 aa12.99□□□□□ -0.33
TNFRSF1B-204ENST00000536782 RMI2Q96E14 147 aa12.99□□□□□ -0.33
TNFRSF1B-204ENST00000536782 FMC1Q96HJ9 113 aa12.99□□□□□ -0.33
TNFRSF1B-204ENST00000536782 TRBV6-1A0A0K0K1D8 114 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 GRIFINA4D1Z8 144 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 PAGE4O60829 102 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 FAM162BQ5T6X4 162 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 COX8CQ7Z4L0 72 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 SLC51BQ86UW2 128 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 SFRP2Q96HF1 295 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 PHLDA3Q9Y5J5 127 aa12.98□□□□□ -0.33
TNFRSF1B-204ENST00000536782 UBE2G1P62253 170 aa12.97□□□□□ -0.33
TNFRSF1B-204ENST00000536782 NIT1Q86X76 327 aa12.97□□□□□ -0.33
TNFRSF1B-204ENST00000536782 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
TNFRSF1B-204ENST00000536782 A0A087WWL8 130 aa12.96□□□□□ -0.33
TNFRSF1B-204ENST00000536782 TRAV1-1A0A0B4J248 108 aa12.96□□□□□ -0.33
TNFRSF1B-204ENST00000536782 J3QL48 77 aa12.96□□□□□ -0.33
TNFRSF1B-204ENST00000536782 AKR1C3P42330 323 aa12.96□□□□□ -0.33
TNFRSF1B-204ENST00000536782 LINC00528Q8N1L1 170 aa12.96□□□□□ -0.33
TNFRSF1B-204ENST00000536782 Q8N976 141 aa12.96□□□□□ -0.33
TNFRSF1B-204ENST00000536782 IGKV2D-24A0A075B6R9 120 aa12.95□□□□□ -0.34
TNFRSF1B-204ENST00000536782 A0A1B0GV50 99 aa12.95□□□□□ -0.34
TNFRSF1B-204ENST00000536782 M0R381 172 aa12.95□□□□□ -0.34
TNFRSF1B-204ENST00000536782 SULT1A2P50226 295 aa12.95□□□□□ -0.34
TNFRSF1B-204ENST00000536782 LINC01559Q495D7 138 aa12.95□□□□□ -0.34
TNFRSF1B-204ENST00000536782 KLK12Q9UKR0 248 aa12.95□□□□□ -0.34
TNFRSF1B-204ENST00000536782 TMSB15BA0A087X1C1 80 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 RBFOX3A6NFN3 312 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 TEX46H3BTG2 121 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 LTAP01374 205 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 S100A9P06702 114 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 ZNF674Q2M3X9 581 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 ZFP82Q8N141 532 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 CHCHD7Q9BUK0 85 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 MANBALQ9NQG1 85 aa12.94□□□□□ -0.34
TNFRSF1B-204ENST00000536782 A0A087WX48 190 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 TRBV10-1A0A0K0K1A3 114 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 RPL36AP83881 106 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 ELOBQ15370 118 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 LINC01620Q4KN68 170 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 KCNIP4Q6PIL6 250 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 C9orf62Q8N4C0 152 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 RPL36ALQ969Q0 106 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 UBE2WQ96B02 151 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 DNAJC30Q96LL9 226 aa12.93□□□□□ -0.34
TNFRSF1B-204ENST00000536782 SCO2A0A1W2PP80 73 aa12.91□□□□□ -0.34
TNFRSF1B-204ENST00000536782 LRP1Q07954 4544 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-204ENST00000536782 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.34
TNFRSF1B-204ENST00000536782 UBE2D3P61077 147 aa12.9□□□□□ -0.34
TNFRSF1B-204ENST00000536782 UBE2D2P62837 147 aa12.9□□□□□ -0.34
TNFRSF1B-204ENST00000536782 SCXQ7RTU7 201 aa12.9□□□□□ -0.34
TNFRSF1B-204ENST00000536782 DEFB104AQ8WTQ1 72 aa12.9□□□□□ -0.34
TNFRSF1B-204ENST00000536782 CCL20P78556 96 aa12.89□□□□□ -0.35
TNFRSF1B-204ENST00000536782 Q0VG73 95 aa12.89□□□□□ -0.35
TNFRSF1B-204ENST00000536782 ATRAIDQ6UW56 229 aa12.89□□□□□ -0.35
TNFRSF1B-204ENST00000536782 GNG13Q9P2W3 67 aa12.89□□□□□ -0.35
TNFRSF1B-204ENST00000536782 OR10G8Q8NGN5 311 aa12.88□□□□□ -0.35
TNFRSF1B-204ENST00000536782 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
TNFRSF1B-204ENST00000536782 KRTAP29-1A8MX34 341 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1B-204ENST00000536782 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
TNFRSF1B-204ENST00000536782 IFNA1P01562 189 aa12.87□□□□□ -0.35
TNFRSF1B-204ENST00000536782 RAB4BP61018 213 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms