RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 S4R3C0 116 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 IGHV7-4-1A0A0J9YVY3 117 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 CENPVL3A0A0U1RRI6 287 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 TMEM89A2RUT3 159 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 A8MWV9 139 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 ODF3BA8MYP8 253 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 TRGV3P03979 118 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 HLA-DMBP28068 263 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 PPIFP30405 207 aaKnown RBP5.93□□□□□ -1.46
CPSF7-216ENST00000536548 EFNA4P52798 201 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 UBE2D3P61077 147 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 SUMO2P61956 95 aaKnown RBP5.93□□□□□ -1.46
CPSF7-216ENST00000536548 UBE2D2P62837 147 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 MINOS1Q5TGZ0 78 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 C9orf47Q6ZRZ4 202 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 ZNF575Q86XF7 245 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 SBSPONQ8IVN8 264 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 TIMD4Q96H15 378 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 AGPAT4-IT1Q9H0P7 198 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 MINOS1-NBL1R4GNA1 71 aa5.93□□□□□ -1.46
CPSF7-216ENST00000536548 TRAV26-1A0A087WT03 109 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 PRAC2D3DTV9 90 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 BUB3O43684 328 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 TSPAN13O95857 204 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 ZNF688P0C7X2 276 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 PRB4P10163 310 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-216ENST00000536548 PRTN3P24158 256 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 RPL32P62910 135 aaKnown RBP5.92□□□□□ -1.46
CPSF7-216ENST00000536548 ATP5G2Q06055 141 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 EBI3Q14213 229 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 Q6ZUT4 128 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 C9orf139Q6ZV77 190 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 Q8N6K4 173 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 BAALCQ8WXS3 180 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 CLUHP3Q96NS8 147 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 METTL26Q96S19 204 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 CDIP1Q9H305 208 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 ZFAND3Q9H8U3 227 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 SPANXA1Q9NS26 97 aa5.92□□□□□ -1.46
CPSF7-216ENST00000536548 CADP27708 2225 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 TRAV21A0A0B4J279 112 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 IGHV3-23P01764 117 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 ASIPP42127 132 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 SMCPP49901 116 aaPredicted RBP5.91□□□□□ -1.46
CPSF7-216ENST00000536548 INSL3P51460 131 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 IGFL4Q6B9Z1 124 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 ZFAND6Q6FIF0 208 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 C2orf66Q6UXQ4 117 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 C1orf122Q6ZSJ8 110 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 EEF1AKMT3Q96AZ1 226 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 TMEM141Q96I45 108 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 LINC00477Q96M19 166 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 C11orf21Q9P2W6 132 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 ERG28Q9UKR5 140 aa5.91□□□□□ -1.46
CPSF7-216ENST00000536548 TRBV7-1A0A0A6YYK4 115 aa5.9□□□□□ -1.46
CPSF7-216ENST00000536548 TRAV26-2A0A0B4J265 109 aa5.9□□□□□ -1.46
CPSF7-216ENST00000536548 PRSS29PA6NIE9 313 aa5.9□□□□□ -1.46
CPSF7-216ENST00000536548 H3BVH4 76 aa5.9□□□□□ -1.46
CPSF7-216ENST00000536548 OVOL1O14753 267 aa5.9□□□□□ -1.46
CPSF7-216ENST00000536548 S100A4P26447 101 aaKnown RBP5.9□□□□□ -1.46
CPSF7-216ENST00000536548 DLX1P56177 255 aa5.9□□□□□ -1.46
CPSF7-216ENST00000536548 PRB3Q04118 309 aaPredicted RBP5.9□□□□□ -1.46
CPSF7-216ENST00000536548 NDUFA11Q86Y39 141 aa5.9□□□□□ -1.46
CPSF7-216ENST00000536548 TRAV8-2A0A0B4J237 113 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 TRBV7-9A0A0J9YWB2 115 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 C11orf86A6NJI1 115 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 TGFAP01135 160 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 MT-ATP8P03928 68 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 CD7P09564 240 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 SCGB1C2P0DMR2 95 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 NDPQ00604 133 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 PMVKQ15126 192 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 C15orf32Q32M92 178 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 VMO1Q7Z5L0 202 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 C10orf126Q8N4M7 172 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 RNF182Q8N6D2 247 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 TEX29Q8N6K0 151 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 OR10J6PQ8NGY7 276 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 RASL10AQ92737 203 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 C16orf92Q96LL3 132 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 ANAPC13Q9BS18 74 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 KLK15Q9H2R5 256 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 PRO1854Q9UHT4 67 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 PHLDA3Q9Y5J5 127 aa5.89□□□□□ -1.47
CPSF7-216ENST00000536548 COL7A1Q02388 2944 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.88□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV7-81A0A0B4J1V7 117 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 A0A0J9YY99 117 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 LY6HO94772 140 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 MGPP08493 103 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 LGALS3P17931 250 aaKnown RBP5.88□□□□□ -1.47
CPSF7-216ENST00000536548 ZFP36P26651 326 aaKnown RBP5.88□□□□□ -1.47
CPSF7-216ENST00000536548 XGP55808 180 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 GAGE5Q13069 117 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 GAGE6Q13070 117 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 NFE4Q86UQ8 179 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 POM121L12Q8N7R1 296 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 C10orf105Q8TEF2 133 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms