RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 AJUBAQ96IF1 538 aa6.33□□□□□ -1.4
ABCA4-207ENST00000536513 PDZD2O15018 2839 aa6.33□□□□□ -1.4
ABCA4-207ENST00000536513 A8MWV9 139 aa6.33□□□□□ -1.4
ABCA4-207ENST00000536513 NPIPB6E9PJ23 425 aa6.33□□□□□ -1.4
ABCA4-207ENST00000536513 LOXL1Q08397 574 aaPredicted RBP6.33□□□□□ -1.4
ABCA4-207ENST00000536513 FAM231DQ6ZW35 169 aa6.33□□□□□ -1.4
ABCA4-207ENST00000536513 FAM167A-AS1Q96KT0 104 aa6.33□□□□□ -1.4
ABCA4-207ENST00000536513 C8orf49Q96NF6 230 aa6.33□□□□□ -1.4
ABCA4-207ENST00000536513 SPAG8Q99932 426 aaPredicted RBP6.33□□□□□ -1.4
ABCA4-207ENST00000536513 ZNF415Q09FC8 603 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 LINC01545Q5VT33 79 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 RETNQ9HD89 108 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 SIGLEC8Q9NYZ4 499 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 PSMG4Q5JS54 123 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 A6NDX4 124 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 PRAC2D3DTV9 90 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 LTAP01374 205 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 GATA3P23771 443 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 PVRIGQ6DKI7 326 aa6.32□□□□□ -1.4
ABCA4-207ENST00000536513 WIPF2Q8TF74 440 aaPredicted RBP6.32□□□□□ -1.4
ABCA4-207ENST00000536513 TMEM89A2RUT3 159 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 DNAJC9-AS1A6NH13 148 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 RS1O15537 224 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 WIPF1O43516 503 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 HERVK_113P61574 105 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 LRRC75A-AS1Q8N1F1 130 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 GTSF1Q8WW33 167 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 DLX4Q92988 240 aaPredicted RBP6.31□□□□□ -1.4
ABCA4-207ENST00000536513 SHANK2-AS3Q9BTD1 123 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
ABCA4-207ENST00000536513 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 ATP5LO75964 103 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 LY6G6DO95868 133 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 SCGB1A1P11684 91 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 Q8N6K4 173 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 C3orf56Q8N813 242 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 TMEM158Q8WZ71 300 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 RNF183Q96D59 192 aa6.31□□□□□ -1.4
ABCA4-207ENST00000536513 A0A087WWL8 130 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 LINC01549A6NIU2 74 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 IGLV2-8P01709 118 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 OTORQ9NRC9 128 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 TRAV12-2A0A075B6T6 113 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 PRSS29PA6NIE9 313 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 GAGE5Q13069 117 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 GAGE6Q13070 117 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 C12orf74Q32Q52 190 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 LGALS9BQ3B8N2 356 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 LGALS9CQ6DKI2 356 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 TENM1Q9UKZ4 2725 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 IGHV4OR15-8A0A075B7B6 117 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 A0A087WW49 117 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 TMEM78Q5T7P6 136 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 THAP8Q8NA92 274 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 IGF2BP2-AS1Q96M15 143 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 SMPXQ9UHP9 88 aa6.3□□□□□ -1.4
ABCA4-207ENST00000536513 TRBV25-1A0A075B6N4 114 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 IGLL5B9A064 214 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 IGHG2P01859 326 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 Q6ZQT7 251 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 ZNF256Q9Y2P7 627 aaPredicted RBP6.29□□□□□ -1.4
ABCA4-207ENST00000536513 FSTL3O95633 263 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 HOXD3P31249 432 aaPredicted RBP6.29□□□□□ -1.4
ABCA4-207ENST00000536513 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
ABCA4-207ENST00000536513 Q86TA4 180 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 TRBV19A0A075B6N1 114 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 TMEM262E9PQX1 116 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 NPYP01303 97 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 INSL3P51460 131 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 Q6AWC8 147 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 LINC00322Q6ZN03 302 aaPredicted RBP6.29□□□□□ -1.4
ABCA4-207ENST00000536513 FOXI2Q6ZQN5 318 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 C2orf91Q6ZV80 131 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 CEND1Q8N111 149 aa6.29□□□□□ -1.4
ABCA4-207ENST00000536513 TRBV7-1A0A0A6YYK4 115 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 M0R381 172 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 IGF1P05019 195 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 FBN1P35555 2871 aaKnown RBP6.28□□□□□ -1.4
ABCA4-207ENST00000536513 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
ABCA4-207ENST00000536513 C9JAW5 83 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 TSPAN13O95857 204 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 MT-ATP8P03928 68 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 GP9P14770 177 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 LINC00477Q96M19 166 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 ESM1Q9NQ30 184 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 CR1P17927 2039 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 F8W735 103 aaPredicted RBP6.28□□□□□ -1.4
ABCA4-207ENST00000536513 J3QLI3 93 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 CD28P10747 220 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 EBI3Q14213 229 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 MRPL51Q4U2R6 128 aaKnown RBP6.28□□□□□ -1.4
ABCA4-207ENST00000536513 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 VWFP04275 2813 aa6.28□□□□□ -1.4
ABCA4-207ENST00000536513 H3BRN7 92 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 PRM2P04554 102 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 TCTEX1D4Q5JR98 221 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 FAM104BQ5XKR9 115 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 NXT2Q9NPJ8 142 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms