RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 MAPKAPK5-AS1Q8N8E1 139 aa9.83□□□□□ -0.84
LDLR-203ENST00000535915 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
LDLR-203ENST00000535915 KIF25-AS1Q9Y6Z4 181 aa9.83□□□□□ -0.84
LDLR-203ENST00000535915 SYNJ2BPP57105 145 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 LINC00315P59091 139 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 TRAV12-2A0A075B6T6 113 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 A0A087WWL8 130 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 A0A096LNT2 108 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 F5H697 171 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 BAALCQ8WXS3 180 aa9.82□□□□□ -0.84
LDLR-203ENST00000535915 ZFYVE26Q68DK2 2539 aa9.81□□□□□ -0.84
LDLR-203ENST00000535915 A0A0J9YX75 114 aa9.81□□□□□ -0.84
LDLR-203ENST00000535915 SUMO4Q6EEV6 95 aa9.81□□□□□ -0.84
LDLR-203ENST00000535915 DUX5Q96PT3 197 aa9.81□□□□□ -0.84
LDLR-203ENST00000535915 VPREB3Q9UKI3 123 aa9.81□□□□□ -0.84
LDLR-203ENST00000535915 LRRK2Q5S007 2527 aa9.81□□□□□ -0.84
LDLR-203ENST00000535915 CR1P17927 2039 aa9.81□□□□□ -0.84
LDLR-203ENST00000535915 PRB1P04280 392 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 WFDC2Q14508 124 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 CEND1Q8N111 149 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
LDLR-203ENST00000535915 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 A0A087WW49 117 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 K7EQG2 157 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 COX6B1P14854 86 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 ZNF462Q96JM2 2506 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 LGALS1P09382 135 aaKnown RBP9.8□□□□□ -0.84
LDLR-203ENST00000535915 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 ODF3Q96PU9 254 aa9.8□□□□□ -0.84
LDLR-203ENST00000535915 SPANXB1Q9NS25 103 aaPredicted RBP9.8□□□□□ -0.84
LDLR-203ENST00000535915 TEX15Q9BXT5 2789 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 OR11H12B2RN74 326 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 F8W1H4 67 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 DUSP14O95147 198 aaKnown RBP9.79□□□□□ -0.84
LDLR-203ENST00000535915 SPINK13Q1W4C9 94 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 OR11H1Q8NG94 326 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 OR11H2Q8NH07 326 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 TM2D2Q9BX73 214 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 NHP2Q9NX24 153 aaKnown RBP9.79□□□□□ -0.84
LDLR-203ENST00000535915 MDFICQ9P1T7 246 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 CYSLTR1Q9Y271 337 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 IGHV3-16A0A0C4DH30 117 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 PRSS29PA6NIE9 313 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 K7ERJ3 54 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 ETDBQ3ZM63 59 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 FOXI2Q6ZQN5 318 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
LDLR-203ENST00000535915 USP24Q9UPU5 2620 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 HOXD3P31249 432 aaPredicted RBP9.78□□□□□ -0.84
LDLR-203ENST00000535915 SPAG8Q99932 426 aaPredicted RBP9.78□□□□□ -0.84
LDLR-203ENST00000535915 TP53TG1Q9Y2A0 90 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 ELANEP08246 267 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
LDLR-203ENST00000535915 Q6YL49 198 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 ZFP2Q6ZN57 461 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 Q8N1Y9 231 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 ZNF702PQ9H963 129 aa9.78□□□□□ -0.84
LDLR-203ENST00000535915 VCYO14598 125 aa9.77□□□□□ -0.84
LDLR-203ENST00000535915 RPL32P62910 135 aaKnown RBP9.77□□□□□ -0.84
LDLR-203ENST00000535915 SYT8Q8NBV8 401 aa9.77□□□□□ -0.84
LDLR-203ENST00000535915 C9orf85Q96MD7 179 aa9.77□□□□□ -0.84
LDLR-203ENST00000535915 BEX4Q9NWD9 120 aaPredicted RBP9.77□□□□□ -0.84
LDLR-203ENST00000535915 MYMXA0A1B0GTQ4 84 aa9.77□□□□□ -0.85
LDLR-203ENST00000535915 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
LDLR-203ENST00000535915 LGALS9O00182 355 aa9.77□□□□□ -0.85
LDLR-203ENST00000535915 HOXA3O43365 443 aaPredicted RBP9.77□□□□□ -0.85
LDLR-203ENST00000535915 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
LDLR-203ENST00000535915 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
LDLR-203ENST00000535915 ZNF56Q15929 161 aa9.76□□□□□ -0.85
LDLR-203ENST00000535915 TAL2Q16559 108 aa9.76□□□□□ -0.85
LDLR-203ENST00000535915 UBR5O95071 2799 aaPredicted RBP9.76□□□□□ -0.85
LDLR-203ENST00000535915 ABCA12Q86UK0 2595 aa9.76□□□□□ -0.85
LDLR-203ENST00000535915 H3BMG7 143 aa9.76□□□□□ -0.85
LDLR-203ENST00000535915 MTURNQ8N3F0 131 aa9.76□□□□□ -0.85
LDLR-203ENST00000535915 PTPN13Q12923 2485 aa9.76□□□□□ -0.85
LDLR-203ENST00000535915 CREBBPQ92793 2442 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 IGHV4-31P0DP07 118 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
LDLR-203ENST00000535915 MRPL16Q9NX20 251 aaKnown RBP9.75□□□□□ -0.85
LDLR-203ENST00000535915 E9PLD3 99 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 CRYGDP07320 174 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 PHLDA1Q8WV24 401 aaPredicted RBP9.75□□□□□ -0.85
LDLR-203ENST00000535915 PRADC1Q9BSG0 188 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 LINC01549A6NIU2 74 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 TSHBP01222 138 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 FSHBP01225 129 aa9.75□□□□□ -0.85
LDLR-203ENST00000535915 ZNF256Q9Y2P7 627 aaPredicted RBP9.75□□□□□ -0.85
LDLR-203ENST00000535915 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
LDLR-203ENST00000535915 EMP1P54849 157 aa9.74□□□□□ -0.85
LDLR-203ENST00000535915 CFAP161Q6P656 301 aa9.74□□□□□ -0.85
LDLR-203ENST00000535915 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
LDLR-203ENST00000535915 DEFB136Q30KP8 78 aa9.74□□□□□ -0.85
LDLR-203ENST00000535915 SLURP1P55000 103 aa9.73□□□□□ -0.85
LDLR-203ENST00000535915 PMVKQ15126 192 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms