RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 EVI2AP22794 236 aa6.06□□□□□ -1.44
NEDD8-207ENST00000533242 BMI1P35226 326 aa6.06□□□□□ -1.44
NEDD8-207ENST00000533242 ATP5G2Q06055 141 aa6.06□□□□□ -1.44
NEDD8-207ENST00000533242 METTL26Q96S19 204 aa6.06□□□□□ -1.44
NEDD8-207ENST00000533242 CNFNQ9BYD5 112 aa6.06□□□□□ -1.44
NEDD8-207ENST00000533242 SNAI2O43623 268 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 CKS2P33552 79 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 PET117Q6UWS5 81 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 DEFB125Q8N687 156 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 OR8A1Q8NGG7 326 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 OR10AG1Q8NH19 301 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 GLMPQ8WWB7 406 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 USMG5Q96IX5 58 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 SCRT2Q9NQ03 307 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 HSPB8Q9UJY1 196 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 HERC2O95714 4834 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 IGHV7-4-1A0A0J9YVY3 117 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 C20orf202A1L168 122 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 J3KRW8 73 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 KIR3DS1Q14943 382 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 ZNF124Q15973 351 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 MPV17L2Q567V2 206 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 SLC50A1Q9BRV3 221 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 TMEM191AQ9H0A3 160 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 ST20Q9HBF5 79 aa6.05□□□□□ -1.44
NEDD8-207ENST00000533242 RBAKDNA6NC62 111 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 OR11H12B2RN74 326 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 CD7P09564 240 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 ARL3P36405 182 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 CD300EQ496F6 205 aaPredicted RBP6.04□□□□□ -1.44
NEDD8-207ENST00000533242 ERASQ7Z444 233 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 IGKV3-7A0A075B6H7 116 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 FBLL1A6NHQ2 334 aaKnown RBP6.04□□□□□ -1.44
NEDD8-207ENST00000533242 F6UB75 175 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 RPS20P60866 119 aaKnown RBP6.04□□□□□ -1.44
NEDD8-207ENST00000533242 ANKRD39Q53RE8 183 aa6.04□□□□□ -1.44
NEDD8-207ENST00000533242 CEMP1Q6PRD7 247 aaPredicted RBP6.04□□□□□ -1.44
NEDD8-207ENST00000533242 FAM223BA6NKX1 122 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 SOCS3O14543 225 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 CACNG7P62955 275 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 DEFB114Q30KQ6 69 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 C9orf47Q6ZRZ4 202 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 C2orf91Q6ZV80 131 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 FAM223AQ8IWN6 122 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 DYNLRB2Q8TF09 96 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 OVOL2Q9BRP0 275 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 WFDC10AQ9H1F0 79 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 KLK5Q9Y337 293 aaPredicted RBP6.03□□□□□ -1.44
NEDD8-207ENST00000533242 GOLT1BQ9Y3E0 138 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 NUDT3O95989 172 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 TMEM78Q5T7P6 136 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 C16orf92Q96LL3 132 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 C18orf15Q96N68 181 aa6.03□□□□□ -1.44
NEDD8-207ENST00000533242 TNFRSF6BO95407 300 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 HBDP02042 147 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 GAGE1Q13065 139 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 TM4SF20Q53R12 229 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 SLC25A34Q6PIV7 304 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 ZFAND2AQ8N6M9 145 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 H3BVH4 76 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 FGF6P10767 208 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 BVES-AS1Q5T3Y7 98 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 ZNF738Q8NE65 137 aa6.02□□□□□ -1.45
NEDD8-207ENST00000533242 IGLV2-18A0A075B6J9 118 aa6.01□□□□□ -1.45
NEDD8-207ENST00000533242 CCL25O15444 150 aa6.01□□□□□ -1.45
NEDD8-207ENST00000533242 HIST1H1AQ02539 215 aaPredicted RBP6.01□□□□□ -1.45
NEDD8-207ENST00000533242 IFI27L1Q96BM0 104 aa6.01□□□□□ -1.45
NEDD8-207ENST00000533242 MRPL53Q96EL3 112 aaKnown RBP6.01□□□□□ -1.45
NEDD8-207ENST00000533242 TP53TG1Q9Y2A0 90 aa6.01□□□□□ -1.45
NEDD8-207ENST00000533242 MUC4Q99102 2169 aa6.01□□□□□ -1.45
NEDD8-207ENST00000533242 A0A0J9YWU9 116 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 HSBP1L1C9JCN9 74 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 NDUFA4O00483 81 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 COX8AP10176 69 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 S100A7P31151 101 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 LGALS9CQ6DKI2 356 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 NRACQ8N912 160 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 UFC1Q9Y3C8 167 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 COX11Q9Y6N1 276 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 LINC01546A6NGU7 62 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 LGALS9O00182 355 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 LEPP41159 167 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 MS4A6AQ9H2W1 248 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 MAP1LC3AQ9H492 121 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 AGRNO00468 2067 aa6□□□□□ -1.45
NEDD8-207ENST00000533242 TAX1BP3O14907 124 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 RPL11P62913 178 aaKnown RBP5.99□□□□□ -1.45
NEDD8-207ENST00000533242 LGALS9BQ3B8N2 356 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 PCP2Q8IVA1 136 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 RHPN1-AS1Q9BWJ2 59 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 TTTY13Q9BZ97 58 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 PPP1R14DQ9NXH3 145 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 IGKV2D-26A0A0A0MRZ7 120 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 ATP6V0BQ99437 205 aa5.99□□□□□ -1.45
NEDD8-207ENST00000533242 GNRH2O43555 120 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 PPBPP02775 128 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 ANXA2RQ3ZCQ2 193 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 SPANXN1Q5VSR9 72 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 284.8 ms