RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TMSB15BA0A087X1C1 80 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 BORCS7-ASMTA0A0B4J1R7 106 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 SH2D1AO60880 128 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 TPT1P13693 172 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 UBE2G1P62253 170 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 UFSP1Q6NVU6 142 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 INO80EQ8NBZ0 244 aaPredicted RBP10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 ZC2HC1AQ96GY0 325 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 MED28Q9H204 178 aa10.4□□□□□ -0.74
CHMP4A-204ENST00000530996 FXYD6-FXYD2A0A087WZ82 144 aa10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 CTXND1A0A1B0GTU2 59 aa10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 CRPP02741 224 aa10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 ELOBQ15370 118 aa10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 FAM162BQ5T6X4 162 aa10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
CHMP4A-204ENST00000530996 KRBOX1C9JBD0 128 aa10.38□□□□□ -0.75
CHMP4A-204ENST00000530996 AKR1C8PQ5T2L2 129 aa10.38□□□□□ -0.75
CHMP4A-204ENST00000530996 RPL7L1Q6DKI1 246 aaKnown RBP10.38□□□□□ -0.75
CHMP4A-204ENST00000530996 HIST1H2BAQ96A08 127 aa10.38□□□□□ -0.75
CHMP4A-204ENST00000530996 CHAC1Q9BUX1 264 aa10.38□□□□□ -0.75
CHMP4A-204ENST00000530996 TMEM262E9PQX1 116 aa10.37□□□□□ -0.75
CHMP4A-204ENST00000530996 ZNF726P1Q15940 193 aa10.37□□□□□ -0.75
CHMP4A-204ENST00000530996 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
CHMP4A-204ENST00000530996 FMC1Q96HJ9 113 aa10.37□□□□□ -0.75
CHMP4A-204ENST00000530996 CHCHD7Q9BUK0 85 aa10.37□□□□□ -0.75
CHMP4A-204ENST00000530996 C1orf43Q9BWL3 253 aa10.37□□□□□ -0.75
CHMP4A-204ENST00000530996 FAM74A7A6NL05 159 aa10.36□□□□□ -0.75
CHMP4A-204ENST00000530996 ZNF56Q15929 161 aa10.36□□□□□ -0.75
CHMP4A-204ENST00000530996 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
CHMP4A-204ENST00000530996 SFRP2Q96HF1 295 aa10.36□□□□□ -0.75
CHMP4A-204ENST00000530996 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
CHMP4A-204ENST00000530996 ZFP30Q9Y2G7 519 aa10.36□□□□□ -0.75
CHMP4A-204ENST00000530996 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 RNF222A6NCQ9 220 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 HLA-DQA1P01909 254 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 AKR1C3P42330 323 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 Q0VG73 95 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 C15orf54Q8N8G6 183 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 CIRBP-AS1Q8TBR5 109 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
CHMP4A-204ENST00000530996 TRBV10-1A0A0K0K1A3 114 aa10.34□□□□□ -0.75
CHMP4A-204ENST00000530996 GIPP09681 153 aaPredicted RBP10.34□□□□□ -0.75
CHMP4A-204ENST00000530996 Q5BKY6 102 aa10.34□□□□□ -0.75
CHMP4A-204ENST00000530996 DNLZQ5SXM8 178 aa10.34□□□□□ -0.75
CHMP4A-204ENST00000530996 CST9LP1Q5W188 147 aa10.34□□□□□ -0.75
CHMP4A-204ENST00000530996 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.34□□□□□ -0.75
CHMP4A-204ENST00000530996 STOML3Q8TAV4 291 aa10.34□□□□□ -0.75
CHMP4A-204ENST00000530996 TRBV7-3A0A075B6L6 115 aa10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 A6NHS1 94 aa10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 IGLV2-8P01709 118 aa10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 CRIP1P50238 77 aa10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 UBE2D3P61077 147 aa10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 UBE2D2P62837 147 aa10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
CHMP4A-204ENST00000530996 PTTG1O95997 202 aa10.32□□□□□ -0.76
CHMP4A-204ENST00000530996 CHCHD5Q9BSY4 110 aa10.32□□□□□ -0.76
CHMP4A-204ENST00000530996 LTAP01374 205 aa10.31□□□□□ -0.76
CHMP4A-204ENST00000530996 RPL37AP61513 92 aaKnown RBP10.31□□□□□ -0.76
CHMP4A-204ENST00000530996 ZNF674Q2M3X9 581 aa10.31□□□□□ -0.76
CHMP4A-204ENST00000530996 MPV17L2Q567V2 206 aa10.31□□□□□ -0.76
CHMP4A-204ENST00000530996 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
CHMP4A-204ENST00000530996 ATRAIDQ6UW56 229 aa10.31□□□□□ -0.76
CHMP4A-204ENST00000530996 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
CHMP4A-204ENST00000530996 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
CHMP4A-204ENST00000530996 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
CHMP4A-204ENST00000530996 CLPSL2Q6UWE3 100 aa10.3□□□□□ -0.76
CHMP4A-204ENST00000530996 COX8CQ7Z4L0 72 aa10.3□□□□□ -0.76
CHMP4A-204ENST00000530996 TCEAL7Q9BRU2 100 aa10.3□□□□□ -0.76
CHMP4A-204ENST00000530996 F5H697 171 aa10.29□□□□□ -0.76
CHMP4A-204ENST00000530996 PKIAP61925 76 aa10.29□□□□□ -0.76
CHMP4A-204ENST00000530996 RPL19P84098 196 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-204ENST00000530996 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
CHMP4A-204ENST00000530996 OR10AG1Q8NH19 301 aa10.29□□□□□ -0.76
CHMP4A-204ENST00000530996 ZNF471Q9BX82 626 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-204ENST00000530996 MUC21A0A0G2JKD1 596 aa10.28□□□□□ -0.76
CHMP4A-204ENST00000530996 MUC21A0A140T8X8 626 aa10.28□□□□□ -0.76
CHMP4A-204ENST00000530996 OXTP01178 125 aa10.28□□□□□ -0.76
CHMP4A-204ENST00000530996 KRTAP10-4P60372 401 aaPredicted RBP10.28□□□□□ -0.76
CHMP4A-204ENST00000530996 RAB4BP61018 213 aa10.28□□□□□ -0.76
CHMP4A-204ENST00000530996 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
CHMP4A-204ENST00000530996 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
CHMP4A-204ENST00000530996 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.77
CHMP4A-204ENST00000530996 A0A1B0GV50 99 aa10.27□□□□□ -0.77
CHMP4A-204ENST00000530996 PFDN1O60925 122 aa10.27□□□□□ -0.77
CHMP4A-204ENST00000530996 SSTP61278 116 aa10.27□□□□□ -0.77
CHMP4A-204ENST00000530996 PRR27Q6MZM9 219 aa10.27□□□□□ -0.77
CHMP4A-204ENST00000530996 OR10G8Q8NGN5 311 aa10.27□□□□□ -0.77
CHMP4A-204ENST00000530996 PLA2G2DQ9UNK4 145 aa10.27□□□□□ -0.77
CHMP4A-204ENST00000530996 ARPC5O15511 151 aa10.26□□□□□ -0.77
CHMP4A-204ENST00000530996 PAGE4O60829 102 aa10.26□□□□□ -0.77
CHMP4A-204ENST00000530996 SMIM17P0DL12 118 aa10.26□□□□□ -0.77
CHMP4A-204ENST00000530996 FHITP49789 147 aa10.26□□□□□ -0.77
CHMP4A-204ENST00000530996 MIAQ16674 131 aa10.26□□□□□ -0.77
CHMP4A-204ENST00000530996 SCO2A0A1W2PP80 73 aa10.25□□□□□ -0.77
CHMP4A-204ENST00000530996 AP1S3Q96PC3 154 aa10.25□□□□□ -0.77
CHMP4A-204ENST00000530996 GAGE6Q13070 117 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms