RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 F8W735 103 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-221ENST00000529873 PRO0628Q9UI54 55 aa6.57□□□□□ -1.36
CTNND1-221ENST00000529873 KIF26BQ2KJY2 2108 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 IGHV3-30P01768 117 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 IGHV3-33P01772 117 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 IGHV3-30-3P0DP02 117 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 IGHV3-30-5P0DP03 117 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 GATA1P15976 413 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-221ENST00000529873 ODF3L1Q8IXM7 274 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 TOMM6Q96B49 74 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 Q9HAA7 133 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 COX7A2LO14548 114 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 TRBV12-3P01733 135 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 UBE2AP49459 152 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 ZNF503Q96F45 646 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 DOCK9Q9BZ29 2069 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 TRAV4A0A0B4J268 109 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 H3BT86 120 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 ZFP36P26651 326 aaKnown RBP6.56□□□□□ -1.36
CTNND1-221ENST00000529873 WFDC2Q14508 124 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 Q8N7P7 452 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 CCL18P55774 89 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 BLCAPP62952 87 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 LTBP2Q14767 1821 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 ARHGEF17Q96PE2 2063 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-221ENST00000529873 OBSL1O75147 1896 aa6.56□□□□□ -1.36
CTNND1-221ENST00000529873 CACNA1DQ01668 2161 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 MDC1Q14676 2089 aaKnown RBP6.55□□□□□ -1.36
CTNND1-221ENST00000529873 SPRY2O43597 315 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 IGLV2-14P01704 120 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 SEM1Q6ZVN7 128 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 LINC00643Q86TS7 51 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 F8WDY8 70 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 SND1-IT1Q9HBX3 110 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 RTTNQ86VV8 2226 aa6.55□□□□□ -1.36
CTNND1-221ENST00000529873 KIAA1549LQ6ZVL6 1849 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 AHCTF1Q8WYP5 2266 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 COL4A4P53420 1690 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-221ENST00000529873 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 CCDC179H3BU77 68 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 C5orf38Q86SI9 138 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 Q8N1Y9 231 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 CEP290O15078 2479 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 SPRY4Q9C004 299 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 IGKV1-17P01599 117 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 MPLKIPQ8TAP9 179 aa6.54□□□□□ -1.36
CTNND1-221ENST00000529873 A6NDX4 124 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 PCP2Q8IVA1 136 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 NCR3O14931 201 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 FAM167A-AS1Q96KT0 104 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 A0A1W2PNU3 283 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-221ENST00000529873 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 TMEM256-PLSCR3K7ERE1 68 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-221ENST00000529873 PRORYQ9H606 182 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 PRAC2D3DTV9 90 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 IGKV4-1P06312 121 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 TMEM61Q8N0U2 210 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
CTNND1-221ENST00000529873 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.36
CTNND1-221ENST00000529873 ZNF106Q9H2Y7 1883 aaKnown RBP6.52□□□□□ -1.37
CTNND1-221ENST00000529873 HEATR1Q9H583 2144 aaKnown RBP6.52□□□□□ -1.37
CTNND1-221ENST00000529873 LYPD6Q86Y78 171 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 NCKAP5O14513 1909 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 DENND4CQ5VZ89 1909 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 GTSF1Q8WW33 167 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 HIGD1BQ9P298 99 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 TP53BP1Q12888 1972 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-221ENST00000529873 IGLV10-54A0A075B6I4 117 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 IGLV1-47P01700 117 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 CTRLP40313 264 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 FBXL19-AS1Q494R0 122 aa6.52□□□□□ -1.37
CTNND1-221ENST00000529873 COL4A3Q01955 1670 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 NDUFA1O15239 70 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 KLK5Q9Y337 293 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-221ENST00000529873 H0Y9J4 135 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 PLA2G2EQ9NZK7 142 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 SMIM26A0A096LP01 95 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 ODF3BA8MYP8 253 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 LGALS9O00182 355 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 IGLC6P0CF74 106 aa6.51□□□□□ -1.37
CTNND1-221ENST00000529873 LRRK1Q38SD2 2015 aa6.5□□□□□ -1.37
CTNND1-221ENST00000529873 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
CTNND1-221ENST00000529873 DNAJC9-AS1A6NH13 148 aa6.5□□□□□ -1.37
CTNND1-221ENST00000529873 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
CTNND1-221ENST00000529873 NDUFA11Q86Y39 141 aa6.5□□□□□ -1.37
CTNND1-221ENST00000529873 TMEM263Q8WUH6 116 aaKnown RBP6.5□□□□□ -1.37
CTNND1-221ENST00000529873 MLST8Q9BVC4 326 aa6.5□□□□□ -1.37
CTNND1-221ENST00000529873 NDUFC1O43677 76 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms