RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 XKRY2A2RUG3 117 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 ZNF727A8MUV8 499 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 GNRH2O43555 120 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 IGHV3-30P01768 117 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 IGHV3-33P01772 117 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 IGHV3-30-3P0DP02 117 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 IGHV3-30-5P0DP03 117 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 RPS20P60866 119 aaKnown RBP4.42□□□□□ -1.7
CD44-221ENST00000526000 PNRC1Q12796 327 aaPredicted RBP4.42□□□□□ -1.7
CD44-221ENST00000526000 SLAQ13239 276 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 ZNF674Q2M3X9 581 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 CENPWQ5EE01 88 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 IBA57Q5T440 356 aaKnown RBP4.42□□□□□ -1.7
CD44-221ENST00000526000 FAM159AQ6UWV7 190 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 NHLRC2Q8NBF2 726 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 PCNPQ8WW12 178 aaKnown RBP4.42□□□□□ -1.7
CD44-221ENST00000526000 DAZAP1Q96EP5 407 aaKnown RBP4.42□□□□□ -1.7
CD44-221ENST00000526000 TVP23CQ96ET8 276 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 SDF2L1Q9HCN8 221 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 NAT8Q9UHE5 227 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 NAGKQ9UJ70 344 aa4.42□□□□□ -1.7
CD44-221ENST00000526000 LECT2O14960 151 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 IGLV2-8P01709 118 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 TMEM241Q24JQ0 296 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 LINC01559Q495D7 138 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 LINC01620Q4KN68 170 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 CT83Q5H943 113 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 PIK3CD-AS1Q5SR53 167 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 DNLZQ5SXM8 178 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 FAM231DQ6ZW35 169 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 COMMD7Q86VX2 200 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 ZC2HC1AQ96GY0 325 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 SGK494Q96LW2 274 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 SPXQ9BT56 116 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 DERL1Q9BUN8 251 aa4.41□□□□□ -1.7
CD44-221ENST00000526000 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
CD44-221ENST00000526000 TRBV20OR9-2A0A075B6H5 130 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 IGHV3-73A0A0B4J1V6 119 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 TMEM218A2RU14 115 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 C19orf71A6NCJ1 209 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 LRCOL1A6NCL2 159 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 FAM231BA6NCW3 169 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 SH2D1AO60880 128 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 P01737 135 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 MGST1P10620 155 aaKnown RBP4.4□□□□□ -1.71
CD44-221ENST00000526000 CEBPGP53567 150 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 WFDC2Q14508 124 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 LINC01551Q86U37 167 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 C15orf54Q8N8G6 183 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 OCC1Q8TAD7 63 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 PTH2Q96A98 100 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 SEC11CQ9BY50 192 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 OSTCQ9NRP0 149 aa4.4□□□□□ -1.71
CD44-221ENST00000526000 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.39□□□□□ -1.71
CD44-221ENST00000526000 IGHV3-38A0A0C4DH36 116 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 B4DEV8 164 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 KRBOX1C9JBD0 128 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 C9JQL5 133 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 PPP1R2P9O14990 202 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 CIDEAO60543 219 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 ORM1P02763 201 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 ASIPP42127 132 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 CRIP1P50238 77 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 ZNF80P51504 273 aaPredicted RBP4.39□□□□□ -1.71
CD44-221ENST00000526000 SRSF3P84103 164 aaKnown RBP4.39□□□□□ -1.71
CD44-221ENST00000526000 OR10J3Q5JRS4 329 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 Q8N3U1 123 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 Q8N814 137 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 IL36BQ9NZH7 164 aa4.39□□□□□ -1.71
CD44-221ENST00000526000 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 A8MWL6 223 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 F2Z2F3 143 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 F8W036 122 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 GATCO43716 136 aaKnown RBP4.38□□□□□ -1.71
CD44-221ENST00000526000 TYMSP04818 313 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 OR5AL1P0C617 328 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 S100A4P26447 101 aaKnown RBP4.38□□□□□ -1.71
CD44-221ENST00000526000 RPL23P62829 140 aaKnown RBP4.38□□□□□ -1.71
CD44-221ENST00000526000 C10orf91Q5T1B1 145 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 PRR27Q6MZM9 219 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 WDR73Q6P4I2 378 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 LINC00528Q8N1L1 170 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 NUDT10Q8NFP7 164 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 OR2D3Q8NGH3 330 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 BAALCQ8WXS3 180 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 RASL10AQ92737 203 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 ISOC2Q96AB3 205 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 ANAPC16Q96DE5 110 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 NUDT11Q96G61 164 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 SFRP2Q96HF1 295 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 TMEM70Q9BUB7 260 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 GFRA4Q9GZZ7 299 aa4.38□□□□□ -1.71
CD44-221ENST00000526000 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
CD44-221ENST00000526000 TRAV8-6A0A0B4J262 113 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 TRAV4A0A0B4J268 109 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 IBA57-AS1B1ANH7 110 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 K7EN84 100 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 M0R2P5 195 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 SNAI2O43623 268 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms