RNA–Protein interactions for RNA: ENST00000524762.5

UBXN1-204, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 763 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-204ENST00000524762 VAX2Q9UIW0 290 aa12.87□□□□□ -0.35
UBXN1-204ENST00000524762 TRAV9-2A0A087WT02 112 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 A0A087WWL8 130 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 EVI2AP22794 236 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 ALKAL2Q6UX46 152 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 SMIM12Q96EX1 92 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 SSBP4Q9BWG4 385 aaPredicted RBP12.86□□□□□ -0.35
UBXN1-204ENST00000524762 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 TNFRSF18Q9Y5U5 241 aa12.86□□□□□ -0.35
UBXN1-204ENST00000524762 TRBV20OR9-2A0A075B6H5 130 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 GAGE12JA6NER3 117 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 OR5AL1P0C617 328 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 TAGLN2P37802 199 aaKnown RBP12.85□□□□□ -0.35
UBXN1-204ENST00000524762 GAGE1Q13065 139 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 GAGE4Q13068 117 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 GAGE5Q13069 117 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 LELP1Q5T871 98 aa12.85□□□□□ -0.35
UBXN1-204ENST00000524762 IGHV3-38A0A0C4DH36 116 aa12.84□□□□□ -0.35
UBXN1-204ENST00000524762 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
UBXN1-204ENST00000524762 GNG4P50150 75 aa12.84□□□□□ -0.35
UBXN1-204ENST00000524762 NKX2-5P52952 324 aaPredicted RBP12.84□□□□□ -0.35
UBXN1-204ENST00000524762 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
UBXN1-204ENST00000524762 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
UBXN1-204ENST00000524762 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
UBXN1-204ENST00000524762 TRAV8-6A0A0B4J262 113 aa12.83□□□□□ -0.36
UBXN1-204ENST00000524762 OR10J3Q5JRS4 329 aa12.83□□□□□ -0.36
UBXN1-204ENST00000524762 NFE4Q86UQ8 179 aa12.83□□□□□ -0.36
UBXN1-204ENST00000524762 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
UBXN1-204ENST00000524762 MSRB1Q9NZV6 116 aa12.83□□□□□ -0.36
UBXN1-204ENST00000524762 BLOC1S1P78537 153 aa12.82□□□□□ -0.36
UBXN1-204ENST00000524762 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
UBXN1-204ENST00000524762 BOLA1Q9Y3E2 137 aa12.82□□□□□ -0.36
UBXN1-204ENST00000524762 C16orf90A8MZG2 172 aa12.81□□□□□ -0.36
UBXN1-204ENST00000524762 SPATA12Q7Z6I5 190 aa12.81□□□□□ -0.36
UBXN1-204ENST00000524762 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
UBXN1-204ENST00000524762 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
UBXN1-204ENST00000524762 IGLC6P0CF74 106 aa12.8□□□□□ -0.36
UBXN1-204ENST00000524762 KRTAP10-2P60368 255 aa12.8□□□□□ -0.36
UBXN1-204ENST00000524762 TRBV10-1A0A0K0K1A3 114 aa12.79□□□□□ -0.36
UBXN1-204ENST00000524762 GZMBP10144 247 aa12.79□□□□□ -0.36
UBXN1-204ENST00000524762 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
UBXN1-204ENST00000524762 OR2D3Q8NGH3 330 aa12.79□□□□□ -0.36
UBXN1-204ENST00000524762 DAZAP1Q96EP5 407 aaKnown RBP12.79□□□□□ -0.36
UBXN1-204ENST00000524762 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
UBXN1-204ENST00000524762 RPS20P60866 119 aaKnown RBP12.78□□□□□ -0.36
UBXN1-204ENST00000524762 RAB4BP61018 213 aa12.78□□□□□ -0.36
UBXN1-204ENST00000524762 BIN3Q9NQY0 253 aa12.78□□□□□ -0.36
UBXN1-204ENST00000524762 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 P01737 135 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 IGHV3-30P01768 117 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 IGHV3-33P01772 117 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 IGHV3-30-3P0DP02 117 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 IGHV3-30-5P0DP03 117 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 ZNF56Q15929 161 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 KIF25-AS1Q9Y6Z4 181 aa12.77□□□□□ -0.37
UBXN1-204ENST00000524762 A0A087WWC5 75 aa12.76□□□□□ -0.37
UBXN1-204ENST00000524762 ERVFC1-1P60608 527 aa12.76□□□□□ -0.37
UBXN1-204ENST00000524762 UBE2D3P61077 147 aa12.76□□□□□ -0.37
UBXN1-204ENST00000524762 UBE2D2P62837 147 aa12.76□□□□□ -0.37
UBXN1-204ENST00000524762 Q8N3U1 123 aa12.76□□□□□ -0.37
UBXN1-204ENST00000524762 LRP1BQ9NZR2 4599 aa12.75□□□□□ -0.37
UBXN1-204ENST00000524762 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
UBXN1-204ENST00000524762 TMEM250H0YL14 139 aa12.75□□□□□ -0.37
UBXN1-204ENST00000524762 K7EN84 100 aa12.75□□□□□ -0.37
UBXN1-204ENST00000524762 SSTP61278 116 aa12.75□□□□□ -0.37
UBXN1-204ENST00000524762 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
UBXN1-204ENST00000524762 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
UBXN1-204ENST00000524762 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
UBXN1-204ENST00000524762 AP1S3Q96PC3 154 aa12.75□□□□□ -0.37
UBXN1-204ENST00000524762 A0A087WTM6 91 aa12.74□□□□□ -0.37
UBXN1-204ENST00000524762 XKRY2A2RUG3 117 aa12.74□□□□□ -0.37
UBXN1-204ENST00000524762 NUDT10Q8NFP7 164 aa12.74□□□□□ -0.37
UBXN1-204ENST00000524762 OCC1Q8TAD7 63 aa12.74□□□□□ -0.37
UBXN1-204ENST00000524762 NUDT11Q96G61 164 aa12.74□□□□□ -0.37
UBXN1-204ENST00000524762 TPPP3Q9BW30 176 aa12.74□□□□□ -0.37
UBXN1-204ENST00000524762 DNAH5Q8TE73 4624 aa12.73□□□□□ -0.37
UBXN1-204ENST00000524762 CACNG7P62955 275 aa12.73□□□□□ -0.37
UBXN1-204ENST00000524762 LAGE3Q14657 143 aa12.73□□□□□ -0.37
UBXN1-204ENST00000524762 TOR2AQ5JU69 321 aa12.72□□□□□ -0.37
UBXN1-204ENST00000524762 RNASE7Q9H1E1 156 aaKnown RBP12.72□□□□□ -0.37
UBXN1-204ENST00000524762 F2Z2F3 143 aa12.71□□□□□ -0.37
UBXN1-204ENST00000524762 EREGO14944 169 aa12.71□□□□□ -0.37
UBXN1-204ENST00000524762 NDUFS6O75380 124 aaKnown RBP12.71□□□□□ -0.37
UBXN1-204ENST00000524762 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
UBXN1-204ENST00000524762 CTRLP40313 264 aa12.71□□□□□ -0.37
UBXN1-204ENST00000524762 LYZL1Q6UWQ5 148 aa12.71□□□□□ -0.37
UBXN1-204ENST00000524762 RPP21Q9H633 154 aaKnown RBP12.71□□□□□ -0.37
UBXN1-204ENST00000524762 Q9HAA7 133 aa12.71□□□□□ -0.37
UBXN1-204ENST00000524762 F5H697 171 aa12.7□□□□□ -0.38
UBXN1-204ENST00000524762 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
UBXN1-204ENST00000524762 DAZ4Q86SG3 579 aaKnown RBP12.7□□□□□ -0.38
UBXN1-204ENST00000524762 NIT1Q86X76 327 aa12.7□□□□□ -0.38
UBXN1-204ENST00000524762 FAM210AQ96ND0 272 aa12.7□□□□□ -0.38
UBXN1-204ENST00000524762 DAZ3Q9NR90 486 aaKnown RBP12.7□□□□□ -0.38
UBXN1-204ENST00000524762 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms