RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 PRSS1P07477 247 aa9.44□□□□□ -0.9
CSTF3-204ENST00000524556 PET100P0DJ07 73 aa9.44□□□□□ -0.9
CSTF3-204ENST00000524556 UBE2D3P61077 147 aa9.44□□□□□ -0.9
CSTF3-204ENST00000524556 UBE2D2P62837 147 aa9.44□□□□□ -0.9
CSTF3-204ENST00000524556 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
CSTF3-204ENST00000524556 SFRP2Q96HF1 295 aa9.44□□□□□ -0.9
CSTF3-204ENST00000524556 A0A087WWL8 130 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 TRBV10-1A0A0K0K1A3 114 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 B4DEV8 164 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 CRPP02741 224 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 ARMS2P0C7Q2 107 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 RPL36AP83881 106 aaKnown RBP9.43□□□□□ -0.9
CSTF3-204ENST00000524556 C15orf54Q8N8G6 183 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 OR11H4Q8NGC9 324 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 RPL36ALQ969Q0 106 aaKnown RBP9.43□□□□□ -0.9
CSTF3-204ENST00000524556 RAB24Q969Q5 203 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 ARL2-SNX15V9GYD0 113 aa9.43□□□□□ -0.9
CSTF3-204ENST00000524556 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 TRAV34A0A0B4J273 112 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 A0A0D9SG52 128 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 KRBOX1C9JBD0 128 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 ENKURQ8TC29 256 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 ZC2HC1AQ96GY0 325 aa9.42□□□□□ -0.9
CSTF3-204ENST00000524556 TRBV6-8A0A0A6YYG3 113 aa9.41□□□□□ -0.9
CSTF3-204ENST00000524556 ANGP03950 147 aaKnown RBP9.41□□□□□ -0.9
CSTF3-204ENST00000524556 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
CSTF3-204ENST00000524556 TMEM167BQ9NRX6 74 aa9.41□□□□□ -0.9
CSTF3-204ENST00000524556 GRIFINA4D1Z8 144 aa9.4□□□□□ -0.9
CSTF3-204ENST00000524556 CRIP1P50238 77 aa9.4□□□□□ -0.9
CSTF3-204ENST00000524556 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
CSTF3-204ENST00000524556 MIAQ16674 131 aa9.4□□□□□ -0.9
CSTF3-204ENST00000524556 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.9
CSTF3-204ENST00000524556 PHLDA3Q9Y5J5 127 aa9.4□□□□□ -0.9
CSTF3-204ENST00000524556 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
CSTF3-204ENST00000524556 INMT-MINDY4F8WBC2 141 aa9.39□□□□□ -0.91
CSTF3-204ENST00000524556 M0R036 132 aa9.39□□□□□ -0.91
CSTF3-204ENST00000524556 CXorf1O96002 111 aa9.39□□□□□ -0.91
CSTF3-204ENST00000524556 M0R381 172 aa9.38□□□□□ -0.91
CSTF3-204ENST00000524556 CIRBPQ14011 172 aaKnown RBP9.38□□□□□ -0.91
CSTF3-204ENST00000524556 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
CSTF3-204ENST00000524556 Q86TA4 180 aa9.38□□□□□ -0.91
CSTF3-204ENST00000524556 HSD17B11Q8NBQ5 300 aa9.38□□□□□ -0.91
CSTF3-204ENST00000524556 PSMG3Q9BT73 122 aaPredicted RBP9.38□□□□□ -0.91
CSTF3-204ENST00000524556 SSNA1O43805 119 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 SH2D1AO60880 128 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 MBP02144 154 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 TPT1P13693 172 aaKnown RBP9.37□□□□□ -0.91
CSTF3-204ENST00000524556 PKIAP61925 76 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 COX8CQ7Z4L0 72 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 CHCHD5Q9BSY4 110 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
CSTF3-204ENST00000524556 PEX7O00628 323 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 PTTG1O95997 202 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 IFNA7P01567 189 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 SERF2P84101 59 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 FAM162BQ5T6X4 162 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 CLRN3Q8NCR9 226 aa9.36□□□□□ -0.91
CSTF3-204ENST00000524556 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
CSTF3-204ENST00000524556 RAB4BP61018 213 aa9.35□□□□□ -0.91
CSTF3-204ENST00000524556 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
CSTF3-204ENST00000524556 LINC00299Q6ZSB3 139 aa9.35□□□□□ -0.91
CSTF3-204ENST00000524556 DPH3Q96FX2 82 aa9.35□□□□□ -0.91
CSTF3-204ENST00000524556 MARVELD1Q9BSK0 173 aa9.35□□□□□ -0.91
CSTF3-204ENST00000524556 ZFP30Q9Y2G7 519 aa9.35□□□□□ -0.91
CSTF3-204ENST00000524556 TMSB15BA0A087X1C1 80 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 RBX1P62877 108 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 LINC01559Q495D7 138 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 PRR27Q6MZM9 219 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 LINC00269Q8N2A0 174 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 S100ZQ8WXG8 99 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 HIST1H2BAQ96A08 127 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 RNF185Q96GF1 192 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 NDUFA13Q9P0J0 144 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 TNFSF18Q9UNG2 199 aa9.34□□□□□ -0.91
CSTF3-204ENST00000524556 UPK1BO75841 260 aa9.33□□□□□ -0.92
CSTF3-204ENST00000524556 UBE2G2P60604 165 aa9.33□□□□□ -0.92
CSTF3-204ENST00000524556 ZNF674Q2M3X9 581 aa9.33□□□□□ -0.92
CSTF3-204ENST00000524556 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
CSTF3-204ENST00000524556 NTM-AS1Q6ZSK4 140 aa9.33□□□□□ -0.92
CSTF3-204ENST00000524556 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
CSTF3-204ENST00000524556 DPH3P1Q9H4G8 78 aa9.33□□□□□ -0.92
CSTF3-204ENST00000524556 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
CSTF3-204ENST00000524556 A0A087WYN8 130 aa9.32□□□□□ -0.92
CSTF3-204ENST00000524556 IFITM3Q01628 133 aa9.32□□□□□ -0.92
CSTF3-204ENST00000524556 ZNF56Q15929 161 aa9.32□□□□□ -0.92
CSTF3-204ENST00000524556 TMEM97Q5BJF2 176 aa9.32□□□□□ -0.92
CSTF3-204ENST00000524556 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
CSTF3-204ENST00000524556 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
CSTF3-204ENST00000524556 hDV102S1A0JD36 115 aa9.31□□□□□ -0.92
CSTF3-204ENST00000524556 FAM74A7A6NL05 159 aa9.31□□□□□ -0.92
CSTF3-204ENST00000524556 CHTF8P0CG12 524 aa9.31□□□□□ -0.92
CSTF3-204ENST00000524556 GAGE6Q13070 117 aa9.31□□□□□ -0.92
CSTF3-204ENST00000524556 SPACA4Q8TDM5 124 aa9.31□□□□□ -0.92
CSTF3-204ENST00000524556 PHOX2AO14813 284 aa9.3□□□□□ -0.92
CSTF3-204ENST00000524556 SLPIP03973 132 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms