RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CCL20P78556 96 aa11.47□□□□□ -0.57
SQLE-205ENST00000521232 GAGE1Q13065 139 aa11.47□□□□□ -0.57
SQLE-205ENST00000521232 GAGE4Q13068 117 aa11.47□□□□□ -0.57
SQLE-205ENST00000521232 GAGE5Q13069 117 aa11.47□□□□□ -0.57
SQLE-205ENST00000521232 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
SQLE-205ENST00000521232 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
SQLE-205ENST00000521232 CXCL1P09341 107 aa11.46□□□□□ -0.57
SQLE-205ENST00000521232 ZFP82Q8N141 532 aa11.46□□□□□ -0.57
SQLE-205ENST00000521232 KRTAP4-5Q9BYR2 181 aa11.46□□□□□ -0.57
SQLE-205ENST00000521232 MANBALQ9NQG1 85 aa11.46□□□□□ -0.57
SQLE-205ENST00000521232 M0R381 172 aa11.45□□□□□ -0.58
SQLE-205ENST00000521232 FAM74A4Q5TZK3 123 aa11.45□□□□□ -0.58
SQLE-205ENST00000521232 CDPF1Q6NVV7 123 aa11.45□□□□□ -0.58
SQLE-205ENST00000521232 A0A087WWL8 130 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 IGHV3-30P01768 117 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 IGHV3-33P01772 117 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 IGHV3-30-3P0DP02 117 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 IGHV3-30-5P0DP03 117 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 RPL35P42766 123 aaKnown RBP11.44□□□□□ -0.58
SQLE-205ENST00000521232 SULT1A2P50226 295 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 RPL19P84098 196 aaKnown RBP11.44□□□□□ -0.58
SQLE-205ENST00000521232 C11orf52Q96A22 123 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 SSBP4Q9BWG4 385 aaPredicted RBP11.44□□□□□ -0.58
SQLE-205ENST00000521232 GNG13Q9P2W3 67 aa11.44□□□□□ -0.58
SQLE-205ENST00000521232 A0A087WWC5 75 aa11.43□□□□□ -0.58
SQLE-205ENST00000521232 TEX46H3BTG2 121 aa11.43□□□□□ -0.58
SQLE-205ENST00000521232 Q6ZNX1 250 aa11.43□□□□□ -0.58
SQLE-205ENST00000521232 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
SQLE-205ENST00000521232 SNAI2O43623 268 aa11.42□□□□□ -0.58
SQLE-205ENST00000521232 C1QBP02746 253 aa11.42□□□□□ -0.58
SQLE-205ENST00000521232 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
SQLE-205ENST00000521232 SLC51BQ86UW2 128 aa11.42□□□□□ -0.58
SQLE-205ENST00000521232 TRBV10-1A0A0K0K1A3 114 aa11.41□□□□□ -0.58
SQLE-205ENST00000521232 LRCOL1A6NCL2 159 aa11.41□□□□□ -0.58
SQLE-205ENST00000521232 PSCAO43653 123 aa11.41□□□□□ -0.58
SQLE-205ENST00000521232 LAGE3Q14657 143 aa11.41□□□□□ -0.58
SQLE-205ENST00000521232 PRR27Q6MZM9 219 aa11.41□□□□□ -0.58
SQLE-205ENST00000521232 OR10AG1Q8NH19 301 aa11.41□□□□□ -0.58
SQLE-205ENST00000521232 DERL1Q9BUN8 251 aa11.41□□□□□ -0.58
SQLE-205ENST00000521232 OR5AL1P0C617 328 aa11.4□□□□□ -0.58
SQLE-205ENST00000521232 Q8N1X5 172 aa11.4□□□□□ -0.58
SQLE-205ENST00000521232 Q9HAA7 133 aa11.4□□□□□ -0.58
SQLE-205ENST00000521232 IGLV2-8P01709 118 aa11.39□□□□□ -0.59
SQLE-205ENST00000521232 RAB4BP61018 213 aa11.39□□□□□ -0.59
SQLE-205ENST00000521232 FAT1Q14517 4588 aa11.39□□□□□ -0.59
SQLE-205ENST00000521232 Q8N3U1 123 aa11.39□□□□□ -0.59
SQLE-205ENST00000521232 DNAH8Q96JB1 4490 aa11.39□□□□□ -0.59
SQLE-205ENST00000521232 TRBV7-3A0A075B6L6 115 aa11.38□□□□□ -0.59
SQLE-205ENST00000521232 UBE2D3P61077 147 aa11.38□□□□□ -0.59
SQLE-205ENST00000521232 UBE2D2P62837 147 aa11.38□□□□□ -0.59
SQLE-205ENST00000521232 RPL36AP83881 106 aaKnown RBP11.38□□□□□ -0.59
SQLE-205ENST00000521232 MEF2BQ02080 365 aaPredicted RBP11.38□□□□□ -0.59
SQLE-205ENST00000521232 CENPWQ5EE01 88 aa11.38□□□□□ -0.59
SQLE-205ENST00000521232 OR10G8Q8NGN5 311 aa11.38□□□□□ -0.59
SQLE-205ENST00000521232 RPL36ALQ969Q0 106 aaKnown RBP11.38□□□□□ -0.59
SQLE-205ENST00000521232 SMIM12Q96EX1 92 aa11.38□□□□□ -0.59
SQLE-205ENST00000521232 RAB19A4D1S5 217 aa11.37□□□□□ -0.59
SQLE-205ENST00000521232 PDE6DO43924 150 aa11.37□□□□□ -0.59
SQLE-205ENST00000521232 SPANXN1Q5VSR9 72 aa11.37□□□□□ -0.59
SQLE-205ENST00000521232 DAZ4Q86SG3 579 aaKnown RBP11.37□□□□□ -0.59
SQLE-205ENST00000521232 TM2D2Q9BX73 214 aa11.37□□□□□ -0.59
SQLE-205ENST00000521232 DAZ3Q9NR90 486 aaKnown RBP11.37□□□□□ -0.59
SQLE-205ENST00000521232 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
SQLE-205ENST00000521232 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
SQLE-205ENST00000521232 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
SQLE-205ENST00000521232 IFNA1P01562 189 aa11.36□□□□□ -0.59
SQLE-205ENST00000521232 KRTAP10-1P60331 282 aa11.36□□□□□ -0.59
SQLE-205ENST00000521232 TOR2AQ5JU69 321 aa11.36□□□□□ -0.59
SQLE-205ENST00000521232 NIT1Q86X76 327 aa11.36□□□□□ -0.59
SQLE-205ENST00000521232 C19orf71A6NCJ1 209 aa11.35□□□□□ -0.59
SQLE-205ENST00000521232 BCL2P10415 239 aa11.35□□□□□ -0.59
SQLE-205ENST00000521232 GCSHP23434 173 aa11.35□□□□□ -0.59
SQLE-205ENST00000521232 XGP55808 180 aa11.35□□□□□ -0.59
SQLE-205ENST00000521232 NTN5Q8WTR8 489 aaPredicted RBP11.35□□□□□ -0.59
SQLE-205ENST00000521232 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
SQLE-205ENST00000521232 MED9Q9NWA0 146 aa11.35□□□□□ -0.59
SQLE-205ENST00000521232 VAX2Q9UIW0 290 aa11.35□□□□□ -0.59
SQLE-205ENST00000521232 KIF25-AS1Q9Y6Z4 181 aa11.35□□□□□ -0.59
SQLE-205ENST00000521232 IGLC6P0CF74 106 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
SQLE-205ENST00000521232 GNG4P50150 75 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
SQLE-205ENST00000521232 ZNF56Q15929 161 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 AKAP14Q86UN6 197 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 C9orf62Q8N4C0 152 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 Q8N814 137 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 NEXN-AS1Q8NBZ9 246 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 URGCP-MRPS24S4R325 110 aa11.34□□□□□ -0.59
SQLE-205ENST00000521232 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
SQLE-205ENST00000521232 SSTP61278 116 aa11.33□□□□□ -0.6
SQLE-205ENST00000521232 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
SQLE-205ENST00000521232 CHCHD7Q9BUK0 85 aa11.33□□□□□ -0.6
SQLE-205ENST00000521232 IGLV5-52A0A0A0MRZ9 124 aa11.32□□□□□ -0.6
SQLE-205ENST00000521232 GZMBP10144 247 aa11.32□□□□□ -0.6
SQLE-205ENST00000521232 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
SQLE-205ENST00000521232 TRBV6-8A0A0A6YYG3 113 aa11.31□□□□□ -0.6
SQLE-205ENST00000521232 RBFOX3A6NFN3 312 aa11.31□□□□□ -0.6
SQLE-205ENST00000521232 F5H697 171 aa11.31□□□□□ -0.6
SQLE-205ENST00000521232 SMIM17P0DL12 118 aa11.31□□□□□ -0.6
SQLE-205ENST00000521232 FER1L6-AS1Q8NA97 138 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms