RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 FAM231DQ6ZW35 169 aa11.18□□□□□ -0.62
TNPO1-212ENST00000520850 NUDT10Q8NFP7 164 aa11.18□□□□□ -0.62
TNPO1-212ENST00000520850 OR2D3Q8NGH3 330 aa11.18□□□□□ -0.62
TNPO1-212ENST00000520850 NUDT11Q96G61 164 aa11.18□□□□□ -0.62
TNPO1-212ENST00000520850 SAMD10Q9BYL1 202 aa11.18□□□□□ -0.62
TNPO1-212ENST00000520850 JPT2Q9H910 190 aa11.18□□□□□ -0.62
TNPO1-212ENST00000520850 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
TNPO1-212ENST00000520850 SIVA1O15304 175 aa11.17□□□□□ -0.62
TNPO1-212ENST00000520850 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
TNPO1-212ENST00000520850 Q6ZSN1 163 aa11.17□□□□□ -0.62
TNPO1-212ENST00000520850 OR10AG1Q8NH19 301 aa11.17□□□□□ -0.62
TNPO1-212ENST00000520850 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 K7EN84 100 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 RAB4BP61018 213 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 CACNG7P62955 275 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 C1orf134Q5TEV5 83 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 SPANXN1Q5VSR9 72 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 FER1L6-AS1Q8NA97 138 aa11.16□□□□□ -0.62
TNPO1-212ENST00000520850 LOC100131303A0A0U1RQF7 123 aa11.15□□□□□ -0.62
TNPO1-212ENST00000520850 RTL8CO15255 209 aa11.15□□□□□ -0.62
TNPO1-212ENST00000520850 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
TNPO1-212ENST00000520850 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
TNPO1-212ENST00000520850 DNAH17Q9UFH2 4485 aa11.15□□□□□ -0.63
TNPO1-212ENST00000520850 PEA15Q15121 130 aa11.14□□□□□ -0.63
TNPO1-212ENST00000520850 CT83Q5H943 113 aa11.14□□□□□ -0.63
TNPO1-212ENST00000520850 ATP6V0E2Q8NHE4 81 aa11.14□□□□□ -0.63
TNPO1-212ENST00000520850 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
TNPO1-212ENST00000520850 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
TNPO1-212ENST00000520850 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
TNPO1-212ENST00000520850 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
TNPO1-212ENST00000520850 TRAV9-2A0A087WT02 112 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 A0A087WWL8 130 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 ZNF727A8MUV8 499 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
TNPO1-212ENST00000520850 FAM74A4Q5TZK3 123 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 C6orf223Q8N319 242 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 OR10G8Q8NGN5 311 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 KIF25-AS1Q9Y6Z4 181 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 FAT2Q9NYQ8 4349 aa11.13□□□□□ -0.63
TNPO1-212ENST00000520850 DNAH10OSP0CZ25 163 aa11.12□□□□□ -0.63
TNPO1-212ENST00000520850 GZMBP10144 247 aa11.12□□□□□ -0.63
TNPO1-212ENST00000520850 CTRLP40313 264 aa11.12□□□□□ -0.63
TNPO1-212ENST00000520850 LELP1Q5T871 98 aa11.12□□□□□ -0.63
TNPO1-212ENST00000520850 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
TNPO1-212ENST00000520850 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
TNPO1-212ENST00000520850 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
TNPO1-212ENST00000520850 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
TNPO1-212ENST00000520850 A0A087WWC5 75 aa11.11□□□□□ -0.63
TNPO1-212ENST00000520850 FAM231BA6NCW3 169 aa11.11□□□□□ -0.63
TNPO1-212ENST00000520850 A8MWL6 223 aa11.11□□□□□ -0.63
TNPO1-212ENST00000520850 LINC00315P59091 139 aa11.11□□□□□ -0.63
TNPO1-212ENST00000520850 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
TNPO1-212ENST00000520850 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
TNPO1-212ENST00000520850 TRBV7-3A0A075B6L6 115 aa11.1□□□□□ -0.63
TNPO1-212ENST00000520850 GATCO43716 136 aaKnown RBP11.1□□□□□ -0.63
TNPO1-212ENST00000520850 SMIM17P0DL12 118 aa11.1□□□□□ -0.63
TNPO1-212ENST00000520850 CEBPGP53567 150 aa11.1□□□□□ -0.63
TNPO1-212ENST00000520850 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
TNPO1-212ENST00000520850 TRAV8-6A0A0B4J262 113 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 TRGC1P0CF51 173 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 NTF3P20783 257 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 EVI2AP22794 236 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 RAB14P61106 215 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
TNPO1-212ENST00000520850 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
TNPO1-212ENST00000520850 KRTAP1-5Q9BYS1 174 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 Q9UF83 564 aa11.09□□□□□ -0.63
TNPO1-212ENST00000520850 IGHV3-38A0A0C4DH36 116 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 C9JQL5 133 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 GAGE1Q13065 139 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 GAGE4Q13068 117 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 GAGE5Q13069 117 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 LINC01556Q5JQF7 62 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 C10orf126Q8N4M7 172 aa11.08□□□□□ -0.64
TNPO1-212ENST00000520850 MUC21A0A0G2JKD1 596 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 MUC21A0A140T8X8 626 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 A0A1B0GVY2 172 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 UBE2D3P61077 147 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 UBE2D2P62837 147 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 GTSF1Q8WW33 167 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 TPPP3Q9BW30 176 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 MSRB1Q9NZV6 116 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 NAT8Q9UHE5 227 aa11.07□□□□□ -0.64
TNPO1-212ENST00000520850 SRSF3P84103 164 aaKnown RBP11.06□□□□□ -0.64
TNPO1-212ENST00000520850 ZNF56Q15929 161 aa11.06□□□□□ -0.64
TNPO1-212ENST00000520850 NFE4Q86UQ8 179 aa11.06□□□□□ -0.64
TNPO1-212ENST00000520850 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
TNPO1-212ENST00000520850 DNAJC30Q96LL9 226 aa11.06□□□□□ -0.64
TNPO1-212ENST00000520850 F5H697 171 aa11.05□□□□□ -0.64
TNPO1-212ENST00000520850 H7C1H1 209 aa11.05□□□□□ -0.64
TNPO1-212ENST00000520850 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
TNPO1-212ENST00000520850 OR10J3Q5JRS4 329 aa11.05□□□□□ -0.64
TNPO1-212ENST00000520850 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms