RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 FAM25CB3EWG5 89 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 FAM25GB3EWG6 89 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 ZNF670-ZNF695F2Z2N8 137 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 GPX1P07203 203 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 KRTAP10-8P60410 259 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 TEX261Q6UWH6 196 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 GKN2Q86XP6 184 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 OR5AK2Q8NH90 309 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 Q8TAT8 98 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 TRIOO75962 3097 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 MRC1P22897 1456 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 TENM4Q6N022 2769 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 LTN1O94822 1766 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 CPSF1Q10570 1443 aaKnown RBP1.76□□□□□ -2.13
SREK1-208ENST00000520580 NAV3Q8IVL0 2385 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 ROCK2O75116 1388 aaKnown RBP1.76□□□□□ -2.13
SREK1-208ENST00000520580 ADGRB1O14514 1584 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 E7EUB6 86 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 DLEU1O43261 78 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 IL9P15248 144 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 CKS2P33552 79 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 DSCR4P56555 118 aaPredicted RBP1.76□□□□□ -2.13
SREK1-208ENST00000520580 POLQO75417 2590 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 J3QRE1 110 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 ERC2-IT1O76042 136 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 TRACP01848 142 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 TSPAN19P0C672 248 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 LSM3P62310 102 aaKnown RBP1.75□□□□□ -2.13
SREK1-208ENST00000520580 QRFPP83859 136 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 PDE6HQ13956 83 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 COA5Q86WW8 74 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 FAM19A2Q8N3H0 131 aa1.75□□□□□ -2.13
SREK1-208ENST00000520580 MAGOHBQ96A72 148 aaKnown RBP1.75□□□□□ -2.13
SREK1-208ENST00000520580 CHCHD2Q9Y6H1 151 aaPredicted RBP1.75□□□□□ -2.13
SREK1-208ENST00000520580 MDC1Q14676 2089 aaKnown RBP1.75□□□□□ -2.13
SREK1-208ENST00000520580 TRBV6-8A0A0A6YYG3 113 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 CD3DP04234 171 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 PRB1P04280 392 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 KRTAP13-3Q3SY46 172 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 C10orf111Q8N326 155 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 OTOSQ8NHW6 89 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 LINC00470Q9BZP3 86 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 CREBBPQ92793 2442 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 FBN2P35556 2912 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 DSPP15924 2871 aaKnown RBP1.74□□□□□ -2.13
SREK1-208ENST00000520580 LOC400499M0QZD8 3231 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 LRRC37A2A6NM11 1700 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 SPTA1P02549 2419 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 FREM3P0C091 2139 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 SAA1P0DJI8 122 aaPredicted RBP1.74□□□□□ -2.13
SREK1-208ENST00000520580 Q6ZRN7 208 aaPredicted RBP1.74□□□□□ -2.13
SREK1-208ENST00000520580 ARPINQ7Z6K5 226 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 TEN1Q86WV5 123 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 LSM2Q9Y333 95 aaKnown RBP1.74□□□□□ -2.13
SREK1-208ENST00000520580 UNC13CQ8NB66 2214 aa1.74□□□□□ -2.13
SREK1-208ENST00000520580 IGF2P01344 180 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 CXCL8P10145 99 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 PRB4P10163 310 aaPredicted RBP1.73□□□□□ -2.13
SREK1-208ENST00000520580 SELENOWP63302 87 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 TJP1Q07157 1748 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 MIR22HGQ0VDD5 57 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 MUC4Q99102 2169 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 REG4Q9BYZ8 158 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 RELNP78509 3460 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 PCNX2A6NKB5 2137 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 PRRC2BQ5JSZ5 2229 aaKnown RBP1.73□□□□□ -2.13
SREK1-208ENST00000520580 MYH1P12882 1939 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 PPLO60437 1756 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 FRYLO94915 3013 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 TPST1O60507 370 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 EDF1O60869 148 aaKnown RBP1.73□□□□□ -2.13
SREK1-208ENST00000520580 GLIPR1L1Q6UWM5 242 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 IZUMO2Q6UXV1 221 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 RPS19BP1Q86WX3 136 aaKnown RBP1.73□□□□□ -2.13
SREK1-208ENST00000520580 C15orf53Q8NAA6 179 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 PSMF1Q92530 271 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 SLC35B3Q9H1N7 401 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 CEP192Q8TEP8 1941 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 CEP295Q9C0D2 2601 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 ANKRD26Q9UPS8 1709 aa1.73□□□□□ -2.13
SREK1-208ENST00000520580 AFDNP55196 1824 aaKnown RBP1.73□□□□□ -2.13
SREK1-208ENST00000520580 TECTAO75443 2155 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 ITPR1Q14643 2758 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 CHD9Q3L8U1 2897 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 RBP4P02753 201 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 EMX2Q04743 252 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 SPCS2Q15005 226 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 C1orf137Q5JT78 98 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 C2orf82Q6UX34 121 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 FOXI2Q6ZQN5 318 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 ZCCHC23Q6ZST2 131 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 LINC00269Q8N2A0 174 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 COL12A1Q99715 3063 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 DLEC1Q9Y238 1755 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 SETD2Q9BYW2 2564 aaPredicted RBP1.72□□□□□ -2.13
SREK1-208ENST00000520580 ANKRD50Q9ULJ7 1429 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 IGSF10Q6WRI0 2623 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 IGHV1-24A0A0C4DH33 117 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 APOC1P02654 83 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms