RNA–Protein interactions for RNA: ENST00000520467.5

SCUBE2-207, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCUBE2, Length 3,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-207ENST00000520467 MUC4Q99102 2169 aa12.37□□□□□ -0.43
SCUBE2-207ENST00000520467 IGHV3OR16-10A0A075B7F0 116 aa12.37□□□□□ -0.43
SCUBE2-207ENST00000520467 SNCGO76070 127 aa12.37□□□□□ -0.43
SCUBE2-207ENST00000520467 SLC25A29Q8N8R3 303 aa12.37□□□□□ -0.43
SCUBE2-207ENST00000520467 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
SCUBE2-207ENST00000520467 C9orf139Q6ZV77 190 aa12.37□□□□□ -0.43
SCUBE2-207ENST00000520467 MRPL53Q96EL3 112 aaKnown RBP12.37□□□□□ -0.43
SCUBE2-207ENST00000520467 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
SCUBE2-207ENST00000520467 AJUBAQ96IF1 538 aa12.36□□□□□ -0.43
SCUBE2-207ENST00000520467 HRNRQ86YZ3 2850 aaPredicted RBP12.36□□□□□ -0.43
SCUBE2-207ENST00000520467 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
SCUBE2-207ENST00000520467 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
SCUBE2-207ENST00000520467 GAGE2EQ4V326 116 aa12.36□□□□□ -0.43
SCUBE2-207ENST00000520467 GAGE2DQ9UEU5 116 aa12.36□□□□□ -0.43
SCUBE2-207ENST00000520467 TRAV4A0A0B4J268 109 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 ADARB2-AS1A8MUL3 147 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 TMEM262E9PQX1 116 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 CRLF1O75462 422 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 ATRXP46100 2492 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 IGIPA6NJ69 53 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 SAA4P35542 130 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 GAGE5Q13069 117 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 GAGE6Q13070 117 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 ELANEP08246 267 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 ADORA2A-AS1P86434 159 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 PAPPA-AS1Q5QFB9 102 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 VCX2Q9H322 139 aa12.35□□□□□ -0.43
SCUBE2-207ENST00000520467 EBI3Q14213 229 aa12.34□□□□□ -0.43
SCUBE2-207ENST00000520467 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
SCUBE2-207ENST00000520467 TRBV7-1A0A0A6YYK4 115 aa12.34□□□□□ -0.43
SCUBE2-207ENST00000520467 COL12A1Q99715 3063 aa12.34□□□□□ -0.43
SCUBE2-207ENST00000520467 SORL1Q92673 2214 aa12.34□□□□□ -0.43
SCUBE2-207ENST00000520467 MINOS1Q5TGZ0 78 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 MUSTN1Q8IVN3 82 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 MINOS1-NBL1R4GNA1 71 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 TEX49A0A1B0GTD5 131 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 TTC32Q5I0X7 151 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 ITLN2Q8WWU7 325 aaPredicted RBP12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 ZNF580Q9UK33 172 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 PPP1R17O96001 155 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 IGKV3-20P01619 116 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 PRSS2P07478 247 aa12.33□□□□□ -0.44
SCUBE2-207ENST00000520467 IGF2RP11717 2491 aa12.32□□□□□ -0.44
SCUBE2-207ENST00000520467 EIF4EBP3O60516 100 aaPredicted RBP12.32□□□□□ -0.44
SCUBE2-207ENST00000520467 IGHV3-33P01772 117 aa12.32□□□□□ -0.44
SCUBE2-207ENST00000520467 NPC2P61916 151 aa12.32□□□□□ -0.44
SCUBE2-207ENST00000520467 C11orf71Q6IPW1 123 aa12.32□□□□□ -0.44
SCUBE2-207ENST00000520467 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
SCUBE2-207ENST00000520467 OOSP1A8MZH6 123 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 VCYO14598 125 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 FAM159AQ6UWV7 190 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 Q8N1Y9 231 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 CENPVL3A0A0U1RRI6 287 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 OVOL1O14753 267 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 ZNF56Q15929 161 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 U3KQE9 123 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 TRAV12-3A0A0B4J271 114 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
SCUBE2-207ENST00000520467 CREBBPQ92793 2442 aa12.3□□□□□ -0.44
SCUBE2-207ENST00000520467 IGHV1-69DA0A0B4J2H0 117 aa12.3□□□□□ -0.44
SCUBE2-207ENST00000520467 CCDC179H3BU77 68 aa12.3□□□□□ -0.44
SCUBE2-207ENST00000520467 NHLRC4P0CG21 123 aaPredicted RBP12.3□□□□□ -0.44
SCUBE2-207ENST00000520467 NDUFV3P56181 108 aaKnown RBP12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 AMELXQ99217 191 aa12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 CITED1Q99966 193 aa12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 UBTD1Q9HAC8 227 aa12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 POLR2KP53803 58 aaKnown RBP12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 LINC00315P59091 139 aa12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 TMEM141Q96I45 108 aa12.29□□□□□ -0.44
SCUBE2-207ENST00000520467 TRAV41A0A0B4J266 112 aa12.28□□□□□ -0.44
SCUBE2-207ENST00000520467 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
SCUBE2-207ENST00000520467 TRAV8-4A0A0B4J246 113 aa12.28□□□□□ -0.44
SCUBE2-207ENST00000520467 A0A0J9YXV3 536 aa12.28□□□□□ -0.44
SCUBE2-207ENST00000520467 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
SCUBE2-207ENST00000520467 RHODO00212 210 aa12.27□□□□□ -0.44
SCUBE2-207ENST00000520467 KLRB1Q12918 225 aa12.27□□□□□ -0.44
SCUBE2-207ENST00000520467 SPXQ9BT56 116 aa12.27□□□□□ -0.44
SCUBE2-207ENST00000520467 SIRPDQ9H106 197 aa12.27□□□□□ -0.44
SCUBE2-207ENST00000520467 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.44
SCUBE2-207ENST00000520467 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.45
SCUBE2-207ENST00000520467 ATXN8Q156A1 80 aa12.27□□□□□ -0.45
SCUBE2-207ENST00000520467 TIMM17AQ99595 171 aa12.27□□□□□ -0.45
SCUBE2-207ENST00000520467 C15orf53Q8NAA6 179 aa12.26□□□□□ -0.45
SCUBE2-207ENST00000520467 TRAV12-2A0A075B6T6 113 aa12.26□□□□□ -0.45
SCUBE2-207ENST00000520467 IFITM1P13164 125 aa12.26□□□□□ -0.45
SCUBE2-207ENST00000520467 EDN2P20800 178 aa12.26□□□□□ -0.45
SCUBE2-207ENST00000520467 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
SCUBE2-207ENST00000520467 Q6ZSV7 163 aa12.26□□□□□ -0.45
SCUBE2-207ENST00000520467 A0A1W2PPR1 153 aa12.25□□□□□ -0.45
SCUBE2-207ENST00000520467 GAGE12JA6NER3 117 aa12.25□□□□□ -0.45
SCUBE2-207ENST00000520467 GAGE7O76087 117 aa12.25□□□□□ -0.45
SCUBE2-207ENST00000520467 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
SCUBE2-207ENST00000520467 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
SCUBE2-207ENST00000520467 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
SCUBE2-207ENST00000520467 GAGE4Q13068 117 aa12.25□□□□□ -0.45
SCUBE2-207ENST00000520467 C5orf56Q8N8D9 126 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms