RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SFRP2Q96HF1 295 aa9.67□□□□□ -0.86
VEGFA-221ENST00000520265 MLST8Q9BVC4 326 aa9.67□□□□□ -0.86
VEGFA-221ENST00000520265 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
VEGFA-221ENST00000520265 IGHV3-38A0A0C4DH36 116 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 C16orf90A8MZG2 172 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 IGHV3-33P01772 117 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 IGHV3-30-3P0DP02 117 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 TAGLN2P37802 199 aaKnown RBP9.66□□□□□ -0.86
VEGFA-221ENST00000520265 BLOC1S1P78537 153 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 GTSF1LQ9H1H1 148 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 SCRT2Q9NQ03 307 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 TNFRSF18Q9Y5U5 241 aa9.66□□□□□ -0.86
VEGFA-221ENST00000520265 F5H697 171 aa9.65□□□□□ -0.86
VEGFA-221ENST00000520265 P01737 135 aa9.65□□□□□ -0.86
VEGFA-221ENST00000520265 SMIM17P0DL12 118 aa9.65□□□□□ -0.86
VEGFA-221ENST00000520265 MED14OSP0DP75 135 aa9.65□□□□□ -0.86
VEGFA-221ENST00000520265 GZMBP10144 247 aa9.65□□□□□ -0.86
VEGFA-221ENST00000520265 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
VEGFA-221ENST00000520265 XKRY2A2RUG3 117 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 CXCL1P09341 107 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 LELP1Q5T871 98 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 SPATA12Q7Z6I5 190 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 NFE4Q86UQ8 179 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 C10orf126Q8N4M7 172 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 Q9HAA7 133 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 BIN3Q9NQY0 253 aa9.64□□□□□ -0.87
VEGFA-221ENST00000520265 RBFOX3A6NFN3 312 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 EREGO14944 169 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 PSCAO43653 123 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 MGPP08493 103 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 TIRAPP58753 221 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 RPS20P60866 119 aaKnown RBP9.63□□□□□ -0.87
VEGFA-221ENST00000520265 UFSP1Q6NVU6 142 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
VEGFA-221ENST00000520265 EIF5A2Q9GZV4 153 aaKnown RBP9.63□□□□□ -0.87
VEGFA-221ENST00000520265 IGLV2-8P01709 118 aa9.62□□□□□ -0.87
VEGFA-221ENST00000520265 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
VEGFA-221ENST00000520265 BTF3P20290 206 aaKnown RBP9.62□□□□□ -0.87
VEGFA-221ENST00000520265 ERVFC1-1P60608 527 aa9.62□□□□□ -0.87
VEGFA-221ENST00000520265 RPL36AP83881 106 aaKnown RBP9.62□□□□□ -0.87
VEGFA-221ENST00000520265 TOR2AQ5JU69 321 aa9.62□□□□□ -0.87
VEGFA-221ENST00000520265 RPL36ALQ969Q0 106 aaKnown RBP9.62□□□□□ -0.87
VEGFA-221ENST00000520265 SMIM12Q96EX1 92 aa9.62□□□□□ -0.87
VEGFA-221ENST00000520265 Q9UF83 564 aa9.62□□□□□ -0.87
VEGFA-221ENST00000520265 URGCP-MRPS24S4R325 110 aa9.62□□□□□ -0.87
VEGFA-221ENST00000520265 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
VEGFA-221ENST00000520265 SNAI2O43623 268 aa9.61□□□□□ -0.87
VEGFA-221ENST00000520265 DNAH2Q9P225 4427 aa9.61□□□□□ -0.87
VEGFA-221ENST00000520265 K7EP13 123 aa9.6□□□□□ -0.87
VEGFA-221ENST00000520265 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
VEGFA-221ENST00000520265 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
VEGFA-221ENST00000520265 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-221ENST00000520265 A0A087WWC5 75 aa9.59□□□□□ -0.87
VEGFA-221ENST00000520265 TRBV10-1A0A0K0K1A3 114 aa9.59□□□□□ -0.87
VEGFA-221ENST00000520265 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
VEGFA-221ENST00000520265 RAB4BP61018 213 aa9.59□□□□□ -0.87
VEGFA-221ENST00000520265 RNASE7Q9H1E1 156 aaKnown RBP9.59□□□□□ -0.87
VEGFA-221ENST00000520265 FAT2Q9NYQ8 4349 aa9.59□□□□□ -0.87
VEGFA-221ENST00000520265 TRBV7-3A0A075B6L6 115 aa9.58□□□□□ -0.88
VEGFA-221ENST00000520265 LINC00694P0DN24 101 aa9.58□□□□□ -0.88
VEGFA-221ENST00000520265 CACNG7P62955 275 aa9.58□□□□□ -0.88
VEGFA-221ENST00000520265 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
VEGFA-221ENST00000520265 Q8N3U1 123 aa9.58□□□□□ -0.88
VEGFA-221ENST00000520265 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
VEGFA-221ENST00000520265 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
VEGFA-221ENST00000520265 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
VEGFA-221ENST00000520265 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
VEGFA-221ENST00000520265 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
VEGFA-221ENST00000520265 TMEM250H0YL14 139 aa9.57□□□□□ -0.88
VEGFA-221ENST00000520265 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.883e-8■□□□□ 10.5
VEGFA-221ENST00000520265 LYZL1Q6UWQ5 148 aa9.57□□□□□ -0.88
VEGFA-221ENST00000520265 PKHD1P08F94 4074 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 A0A087WX48 190 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 TMEM262E9PQX1 116 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 F2Z2F3 143 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 K7EN84 100 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 KRTAP10-2P60368 255 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 TWIST1Q15672 202 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 SMIM7Q9BQ49 75 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
VEGFA-221ENST00000520265 IBA57-AS1B1ANH7 110 aa9.55□□□□□ -0.88
VEGFA-221ENST00000520265 GATCO43716 136 aaKnown RBP9.55□□□□□ -0.88
VEGFA-221ENST00000520265 UBE2D3P61077 147 aa9.55□□□□□ -0.88
VEGFA-221ENST00000520265 UBE2D2P62837 147 aa9.55□□□□□ -0.88
VEGFA-221ENST00000520265 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
VEGFA-221ENST00000520265 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
VEGFA-221ENST00000520265 ZNF727A8MUV8 499 aa9.54□□□□□ -0.88
VEGFA-221ENST00000520265 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
VEGFA-221ENST00000520265 FAM210AQ96ND0 272 aa9.54□□□□□ -0.88
VEGFA-221ENST00000520265 CHCHD5Q9BSY4 110 aa9.54□□□□□ -0.88
VEGFA-221ENST00000520265 A0A087WTM6 91 aa9.53□□□□□ -0.88
VEGFA-221ENST00000520265 H7C1H1 209 aa9.53□□□□□ -0.88
VEGFA-221ENST00000520265 NTF3P20783 257 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms