RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MRPL51Q4U2R6 128 aaKnown RBP7.57□□□□□ -1.2
PABPC1-203ENST00000517921 Q6ZTI0 123 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 SMIM15Q7Z3B0 74 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 C14orf178Q8N769 122 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-203ENST00000517921 RASL10AQ92737 203 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 NDUFAF3Q9BU61 184 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 DPH3P1Q9H4G8 78 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 NOP10Q9NPE3 64 aaKnown RBP7.57□□□□□ -1.2
PABPC1-203ENST00000517921 KIF25-AS1Q9Y6Z4 181 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 RAB4AP20338 218 aa7.56□□□□□ -1.2
PABPC1-203ENST00000517921 LINC00315P59091 139 aa7.56□□□□□ -1.2
PABPC1-203ENST00000517921 SBSPONQ8IVN8 264 aa7.56□□□□□ -1.2
PABPC1-203ENST00000517921 LINC00612Q8N6U2 182 aa7.56□□□□□ -1.2
PABPC1-203ENST00000517921 SAMD10Q9BYL1 202 aa7.56□□□□□ -1.2
PABPC1-203ENST00000517921 A0A087WWL8 130 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 A8MWV9 139 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 DEFB4AO15263 64 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 RS1O15537 224 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BKO60814 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BJP06899 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 CRYGDP07320 174 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 MGPP08493 103 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 SMIM17P0DL12 118 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BOP23527 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 SRIP30626 198 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BBP33778 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 EMP1P54849 157 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BDP58876 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BCP62807 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST2H2BEQ16778 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-203ENST00000517921 FAM74A4Q5TZK3 123 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 UFSP1Q6NVU6 142 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 POM121L12Q8N7R1 296 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BHQ93079 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BNQ99877 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 HIST1H2BMQ99879 126 aa7.55□□□□□ -1.2
PABPC1-203ENST00000517921 D6R8Y8 96 aa7.54□□□□□ -1.2
PABPC1-203ENST00000517921 SMKR1H3BMG3 65 aa7.54□□□□□ -1.2
PABPC1-203ENST00000517921 NCR2O95944 276 aa7.54□□□□□ -1.2
PABPC1-203ENST00000517921 RAB5BP61020 215 aa7.54□□□□□ -1.2
PABPC1-203ENST00000517921 CFAP126Q5VTH2 177 aa7.54□□□□□ -1.2
PABPC1-203ENST00000517921 TM2D3Q9BRN9 247 aa7.54□□□□□ -1.2
PABPC1-203ENST00000517921 ALKBH7Q9BT30 221 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-203ENST00000517921 U3KQK5 164 aa7.54□□□□□ -1.2
PABPC1-203ENST00000517921 TRAV26-2A0A0B4J265 109 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 TRAV4A0A0B4J268 109 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 GAGE12BA1L429 117 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 RHODO00212 210 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 GAGE7O76087 117 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 GAS8-AS1O95177 125 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 FAM222AQ5U5X8 452 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 SUMO4Q6EEV6 95 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 ORMDL3Q8N138 153 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 SPATA25Q9BR10 227 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 DKK2Q9UBU2 259 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 CELA1Q9UNI1 258 aa7.53□□□□□ -1.2
PABPC1-203ENST00000517921 NPYP01303 97 aa7.52□□□□□ -1.21
PABPC1-203ENST00000517921 PPBPP02775 128 aa7.52□□□□□ -1.21
PABPC1-203ENST00000517921 GATA1P15976 413 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-203ENST00000517921 CKS2P33552 79 aa7.52□□□□□ -1.21
PABPC1-203ENST00000517921 ZNF56Q15929 161 aa7.52□□□□□ -1.21
PABPC1-203ENST00000517921 PRELID3AQ96N28 172 aa7.52□□□□□ -1.21
PABPC1-203ENST00000517921 C11orf68Q9H3H3 251 aaKnown RBP7.52□□□□□ -1.21
PABPC1-203ENST00000517921 TRGV2A0A075B6R0 118 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 IGHV3-73A0A0B4J1V6 119 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 IGHV3-53P01767 116 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 ZFP2Q6ZN57 461 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 NRACQ8N912 160 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 OR4C5Q8NGB2 326 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 C18orf32Q8TCD1 76 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 ZNF479Q96JC4 524 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 C18orf15Q96N68 181 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 EDA2RQ9HAV5 297 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
PABPC1-203ENST00000517921 F5H697 171 aa7.5□□□□□ -1.21
PABPC1-203ENST00000517921 DEFB130BP0DP73 79 aa7.5□□□□□ -1.21
PABPC1-203ENST00000517921 DEFB130AP0DP74 79 aa7.5□□□□□ -1.21
PABPC1-203ENST00000517921 IQCJQ1A5X6 159 aa7.5□□□□□ -1.21
PABPC1-203ENST00000517921 Q6ZSN1 163 aa7.5□□□□□ -1.21
PABPC1-203ENST00000517921 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
PABPC1-203ENST00000517921 B9D2Q9BPU9 175 aa7.5□□□□□ -1.21
PABPC1-203ENST00000517921 M0QY20 66 aa7.49□□□□□ -1.21
PABPC1-203ENST00000517921 TNFRSF6BO95407 300 aa7.49□□□□□ -1.21
PABPC1-203ENST00000517921 SPART-AS1P0CW21 52 aa7.49□□□□□ -1.21
PABPC1-203ENST00000517921 LINC00310P59036 64 aa7.49□□□□□ -1.21
PABPC1-203ENST00000517921 Q0VG73 95 aa7.49□□□□□ -1.21
PABPC1-203ENST00000517921 OR10J3Q5JRS4 329 aa7.49□□□□□ -1.21
PABPC1-203ENST00000517921 LAMTOR2Q9Y2Q5 125 aa7.49□□□□□ -1.21
PABPC1-203ENST00000517921 A0A0J9YWU9 116 aa7.48□□□□□ -1.21
PABPC1-203ENST00000517921 TEX48A0A1B0GUV7 120 aa7.48□□□□□ -1.21
PABPC1-203ENST00000517921 CIDEAO60543 219 aa7.48□□□□□ -1.21
PABPC1-203ENST00000517921 NDUFA6P56556 154 aa7.48□□□□□ -1.21
PABPC1-203ENST00000517921 DAD1P61803 113 aa7.48□□□□□ -1.21
PABPC1-203ENST00000517921 COA6Q5JTJ3 125 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms