RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 Q6ZTI0 123 aa4.1□□□□□ -1.75
SCARNA6.1-201ENST00000516989 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
SCARNA6.1-201ENST00000516989 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
SCARNA6.1-201ENST00000516989 SPXQ9BT56 116 aa4.1□□□□□ -1.75
SCARNA6.1-201ENST00000516989 PARLQ9H300 379 aa4.1□□□□□ -1.75
SCARNA6.1-201ENST00000516989 MRPL16Q9NX20 251 aaKnown RBP4.1□□□□□ -1.75
SCARNA6.1-201ENST00000516989 HYDINQ4G0P3 5121 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 STAB2Q8WWQ8 2551 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 TRBV20OR9-2A0A075B6H5 130 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 KRBOX1C9JBD0 128 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 C9JQL5 133 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 NDUFS6O75380 124 aaKnown RBP4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 P01737 135 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 IGHV3-53P01767 116 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 ATP5G1P05496 136 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 ARMS2P0C7Q2 107 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 SSTP61278 116 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 TMEM241Q24JQ0 296 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 SOHLH1Q5JUK2 328 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 LINC00612Q8N6U2 182 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 SMIM12Q96EX1 92 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 SMIM7Q9BQ49 75 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 SMDT1Q9H4I9 107 aa4.09□□□□□ -1.75
SCARNA6.1-201ENST00000516989 IGLV5-52A0A0A0MRZ9 124 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 H3BVH4 76 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 SLPIP03973 132 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 GZMBP10144 247 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 ERVFC1-1P60608 527 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RPS20P60866 119 aaKnown RBP4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 ZNF876PQ49A33 203 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 FAM74A3Q4VXF1 159 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 NRACQ8N912 160 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 OR4C5Q8NGB2 326 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 OR2D3Q8NGH3 330 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RASL10AQ92737 203 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 C9orf85Q96MD7 179 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 NDUFAF3Q9BU61 184 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 TPPP3Q9BW30 176 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RNASE7Q9H1E1 156 aaKnown RBP4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 PHLDA3Q9Y5J5 127 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 COL7A1Q02388 2944 aa4.08□□□□□ -1.76
SCARNA6.1-201ENST00000516989 IGHV4-4A0A075B6R2 117 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 TRGV4A0A0C4DH28 118 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 MUC21A0A0G2JKD1 596 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 A0A0J9YY99 117 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 MUC21A0A140T8X8 626 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 XKRY2A2RUG3 117 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 C19orf71A6NCJ1 209 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 K7EN84 100 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 M0R381 172 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 GATCO43716 136 aaKnown RBP4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 SFTA3P0C7M3 94 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RNASE3P12724 160 aaKnown RBP4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 ADIRFQ15847 76 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 DNLZQ5SXM8 178 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 LINC01551Q86U37 167 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 ZNF575Q86XF7 245 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 ZNF479Q96JC4 524 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 IL36BQ9NZH7 164 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 NAT8Q9UHE5 227 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 HHLA3Q9XRX5 114 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 LY96Q9Y6Y9 160 aa4.07□□□□□ -1.76
SCARNA6.1-201ENST00000516989 NACAE9PAV3 2078 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 IGHV3-73A0A0B4J1V6 119 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 TRAV4A0A0B4J268 109 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RS1O15537 224 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 TCTAP57738 103 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RPL23P62829 140 aaKnown RBP4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 SLAQ13239 276 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 SPANXN1Q5VSR9 72 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 POM121L12Q8N7R1 296 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 FER1L6-AS1Q8NA97 138 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RPL36ALQ969Q0 106 aaKnown RBP4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 FAM210BQ96KR6 192 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 C18orf15Q96N68 181 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 RPP21Q9H633 154 aaKnown RBP4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 SCRT2Q9NQ03 307 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 APLNQ9ULZ1 77 aa4.06□□□□□ -1.76
SCARNA6.1-201ENST00000516989 A8MWL6 223 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 A8MWV9 139 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 LY6G6CO95867 125 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 CXCL1P09341 107 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 OR5AL1P0C617 328 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 FAM74A4Q5TZK3 123 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 CFAP126Q5VTH2 177 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 UQCC3Q6UW78 93 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 FAM231DQ6ZW35 169 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 COMMD7Q86VX2 200 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 ZFP82Q8N141 532 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 C15orf54Q8N8G6 183 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 OR10G8Q8NGN5 311 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 OR10AG1Q8NH19 301 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 PTH2Q96A98 100 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 SAMD10Q9BYL1 202 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 JPT2Q9H910 190 aa4.05□□□□□ -1.76
SCARNA6.1-201ENST00000516989 OSTCQ9NRP0 149 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms