RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 COPZ1P61923 177 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 FXYD3Q14802 87 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 ZNF56Q15929 161 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 CCDC58Q4VC31 144 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 COPS9Q8WXC6 57 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 PSMG3Q9BT73 122 aaPredicted RBP0.6□□□□□ -2.31
PHF3-211ENST00000514822 TPT1P8Q9HAU6 139 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 CCDC167Q9P0B6 97 aa0.6□□□□□ -2.31
PHF3-211ENST00000514822 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.31
PHF3-211ENST00000514822 FANCMQ8IYD8 2048 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 MXRA5Q9NR99 2828 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 TRAV17A0A0B4J275 112 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 RBAKDNA6NC62 111 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 PYYP10082 97 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 PIPP12273 146 aaPredicted RBP0.59□□□□□ -2.31
PHF3-211ENST00000514822 ZNF137PP52743 207 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 SELENOWP63302 87 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 SPCS2Q15005 226 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 IQCJQ1A5X6 159 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 GLYATL3Q5SZD4 288 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 SPANXN1Q5VSR9 72 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 SPATA8Q6RVD6 105 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 VSTM2AQ8TAG5 236 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 TMEM141Q96I45 108 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 TMEM191AQ9H0A3 160 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 TMEM14BQ9NUH8 114 aa0.59□□□□□ -2.31
PHF3-211ENST00000514822 STAB2Q8WWQ8 2551 aa0.59□□□□□ -2.32
PHF3-211ENST00000514822 COL12A1Q99715 3063 aa0.59□□□□□ -2.32
PHF3-211ENST00000514822 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.32
PHF3-211ENST00000514822 PTPRDP23468 1912 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 LOC101927531A0A1B0GV80 90 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 IFNA17P01571 189 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 LINC00694P0DN24 101 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 SPINT3P49223 89 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 SARNPP82979 210 aaKnown RBP0.58□□□□□ -2.32
PHF3-211ENST00000514822 SSBP1Q04837 148 aaKnown RBP0.58□□□□□ -2.32
PHF3-211ENST00000514822 C4orf33Q8N1A6 199 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 KCNRGQ8N5I3 272 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 C5orf56Q8N8D9 126 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 TSTD1Q8NFU3 115 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 LINC00208Q96KT6 92 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 DSCR8Q96T75 97 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 LSM2Q9Y333 95 aaKnown RBP0.58□□□□□ -2.32
PHF3-211ENST00000514822 USP9YO00507 2555 aaPredicted RBP0.58□□□□□ -2.32
PHF3-211ENST00000514822 KNTC1P50748 2209 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 FLNCQ14315 2725 aa0.58□□□□□ -2.32
PHF3-211ENST00000514822 APCP25054 2843 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 CITO14578 2027 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 KIAA1549LQ6ZVL6 1849 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 XIRP1Q702N8 1843 aaKnown RBP0.57□□□□□ -2.32
PHF3-211ENST00000514822 SOGA1O94964 1423 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 CFAP47Q6ZTR5 3102 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 CFAP46Q8IYW2 2715 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 NBDYA0A0U1RRE5 68 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 FAM92AA1XBS5 289 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 ZNF670-ZNF695F2Z2N8 137 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 FXYD1O00168 92 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 NPFFO15130 113 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 SLC25A6P12236 298 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 RPS25P62851 125 aaKnown RBP0.57□□□□□ -2.32
PHF3-211ENST00000514822 FAM74A4Q5TZK3 123 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 RPL7L1Q6DKI1 246 aaKnown RBP0.57□□□□□ -2.32
PHF3-211ENST00000514822 C1orf54Q8WWF1 131 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 TSC22D3Q99576 134 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 CSMD1Q96PZ7 3565 aa0.57□□□□□ -2.32
PHF3-211ENST00000514822 USP54Q70EL1 1684 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 SPG11Q96JI7 2443 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 EYSQ5T1H1 3165 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 UTP20O75691 2785 aaKnown RBP0.56□□□□□ -2.32
PHF3-211ENST00000514822 TCRBV3S1A0A5B6 114 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 RPL37P61927 97 aaKnown RBP0.56□□□□□ -2.32
PHF3-211ENST00000514822 C6orf52Q5T4I8 152 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 OR2T2Q6IF00 324 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 CYP2G1PQ6ZSU1 146 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 RPRMQ9NS64 109 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 SCP2D1Q9UJQ7 156 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 OTOGQ6ZRI0 2925 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 MYH1P12882 1939 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 ATG2AQ2TAZ0 1938 aa0.56□□□□□ -2.32
PHF3-211ENST00000514822 BLMP54132 1417 aaPredicted RBP0.55□□□□□ -2.32
PHF3-211ENST00000514822 SZT2Q5T011 3432 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 VCANP13611 3396 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 RNF213Q63HN8 5207 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
PHF3-211ENST00000514822 A0A096LNT2 108 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 NDUFB6O95139 128 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 SPINK7P58062 85 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 SPTSSAQ969W0 71 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 C10orf95Q9H7T3 257 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 NBEAL1Q6ZS30 2694 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 TMEM2Q9UHN6 1383 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 KIDINS220Q9ULH0 1771 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 DAPK1P53355 1430 aa0.55□□□□□ -2.32
PHF3-211ENST00000514822 PRG4Q92954 1404 aaPredicted RBP0.55□□□□□ -2.32
PHF3-211ENST00000514822 NBEAQ8NFP9 2946 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 ZCCHC6Q5VYS8 1495 aaKnown RBP0.54□□□□□ -2.32
PHF3-211ENST00000514822 KIAA0100Q14667 2235 aaKnown RBP0.54□□□□□ -2.32
PHF3-211ENST00000514822 HELZP42694 1942 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms