RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CIDEAO60543 219 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 NBEAP1P0C6P0 100 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 TBPP20226 339 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 RBX1P62877 108 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 GNG5P63218 68 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 PPP1R1AQ13522 171 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 SPCS2Q15005 226 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 FAM162BQ5T6X4 162 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 GOLT1AQ6ZVE7 132 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 MIR17HGQ75NE6 70 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 PHF5AQ7RTV0 110 aaKnown RBP1.89□□□□□ -2.11
CHD1-211ENST00000514344 C15orf56Q8N910 161 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 ASB13Q8WXK3 278 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 CIB3Q96Q77 187 aaPredicted RBP1.89□□□□□ -2.11
CHD1-211ENST00000514344 NAA50Q9GZZ1 169 aaKnown RBP1.89□□□□□ -2.11
CHD1-211ENST00000514344 PARLQ9H300 379 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 PPDPFQ9H3Y8 114 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 A0A087WZ39 114 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 GRIFINA4D1Z8 144 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 MED6O75586 246 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 CSN1S1P47710 185 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 GAGE2BQ13066 116 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 LINC00173Q6ZV60 143 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 OR10G7Q8NGN6 311 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 DIRAS2Q96HU8 199 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 RABL2AQ9UBK7 228 aaPredicted RBP1.89□□□□□ -2.11
CHD1-211ENST00000514344 SCP2D1Q9UJQ7 156 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 C7orf66A4D0T2 115 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 H3BVH4 76 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 GCGP01275 180 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 AKAIN1P0CW23 69 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 AMTP48728 403 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 S100A10P60903 97 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 ASB16-AS1Q495Z4 193 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 PRRT1Q99946 306 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 FLVCR2Q9UPI3 526 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 PRELID1Q9Y255 219 aa1.89□□□□□ -2.11
CHD1-211ENST00000514344 A0A087X002 238 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 TRAV21A0A0B4J279 112 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 F5H697 171 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 KRTAP4-16G5E9R7 235 aaPredicted RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 UBE2L3P68036 154 aaKnown RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 RPL36AP83881 106 aaKnown RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 FOXI1Q12951 378 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 IAH1Q2TAA2 248 aaPredicted RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 KRTAP19-2Q3LHN2 52 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 LINC00337Q8N6G1 96 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 TMEM229BQ8NBD8 167 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 OR1L4Q8NGR5 311 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 CMTM2Q8TAZ6 248 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 RPL36ALQ969Q0 106 aaKnown RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 RPP21Q9H633 154 aaKnown RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 C11orf21Q9P2W6 132 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 TRBV7-3A0A075B6L6 115 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 A8MWV9 139 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 L7N2F9 121 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 FGF7P21781 194 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 ZNF80P51504 273 aaPredicted RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 RAB2AP61019 212 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 VAMP2P63027 116 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 PDE6HQ13956 83 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 C9orf116Q5BN46 136 aaPredicted RBP1.88□□□□□ -2.11
CHD1-211ENST00000514344 SPANXN2Q5MJ10 180 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 CFAP161Q6P656 301 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 ZFP2Q6ZN57 461 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 KRTAP11-1Q8IUC1 163 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 TYMSOSQ8TAI1 123 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 FUNDC2Q9BWH2 189 aa1.88□□□□□ -2.11
CHD1-211ENST00000514344 TRAV6A0A075B6T7 132 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 TRBV7-9A0A0J9YWB2 115 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 RNASE3P12724 160 aaKnown RBP1.87□□□□□ -2.11
CHD1-211ENST00000514344 SULT1A2P50226 295 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 UBE2D3P61077 147 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 UBE2D2P62837 147 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 ZNF56Q15929 161 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 TMEM128Q5BJH2 165 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 TVP23CQ96ET8 276 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 SDHCQ99643 169 aaPredicted RBP1.87□□□□□ -2.11
CHD1-211ENST00000514344 TRAV34A0A0B4J273 112 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 GAGE12HA6NDE8 117 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 ZNF561-AS1K7EIQ3 104 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 K7EPK0 472 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 SLC25A6P12236 298 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 PTTG1IPP53801 180 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 SEC61BP60468 96 aaKnown RBP1.87□□□□□ -2.11
CHD1-211ENST00000514344 CTF1Q16619 201 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 PRNTQ86SH4 94 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 UQCC1Q9NVA1 299 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 PHLDA3Q9Y5J5 127 aa1.87□□□□□ -2.11
CHD1-211ENST00000514344 IGLV4-60A0A075B6I1 120 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 TRAV8-4A0A0B4J246 113 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 H3BMQ9 156 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 P01737 135 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 BCL2P10415 239 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 UFSP1Q6NVU6 142 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 NTM-AS1Q6ZSK4 140 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 C20orf203Q8NBC4 194 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 CARD19Q96LW7 228 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 PFDN5Q99471 154 aa1.86□□□□□ -2.11
CHD1-211ENST00000514344 OPRPNQ99935 248 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms