RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PRO0255Q9UI72 69 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 LY6G6CO95867 125 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 IFITM1P13164 125 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 ANKRD39Q53RE8 183 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 MUSTN1Q8IVN3 82 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 C4orf3Q8WVX3 66 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 NPSP0C0P6 89 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 IL15RAQ13261 267 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 KRTAP27-1Q3LI81 207 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 C18orf32Q8TCD1 76 aa4.5□□□□□ -1.69
USP38-203ENST00000511739 TRBV7-3A0A075B6L6 115 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 TEX22C9J3V5 150 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 LGALS9BQ3B8N2 356 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 LGALS9CQ6DKI2 356 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 DEFB131BA0A096LNP1 70 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 INAFM1C9JVW0 142 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 DEFB125Q8N687 156 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 FGF23Q9GZV9 251 aaPredicted RBP4.49□□□□□ -1.69
USP38-203ENST00000511739 SONP18583 2426 aaKnown RBP4.49□□□□□ -1.69
USP38-203ENST00000511739 KIR2DL5BA0A0G2JN68 375 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 KIR2DL5BA0A0G2JPC4 375 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 NDUFA11Q86Y39 141 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 KIR2DL5AQ8N109 375 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 RBAKDNA6NC62 111 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 PRSS47A8MTI9 375 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 CRYGDP07320 174 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 DAZAP2Q15038 168 aaPredicted RBP4.49□□□□□ -1.69
USP38-203ENST00000511739 MED13LQ71F56 2210 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 PRO3102Q9H379 93 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 DNAJC9-AS1A6NH13 148 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 K7EMI3 77 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 ACYP1P07311 99 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 CFC1BP0CG36 223 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 CFC1P0CG37 223 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 UBE2V1Q13404 147 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 CEND1Q8N111 149 aa4.49□□□□□ -1.69
USP38-203ENST00000511739 PCNTO95613 3336 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 FAM19A1Q7Z5A9 133 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.48□□□□□ -1.69
USP38-203ENST00000511739 NTN5Q8WTR8 489 aaPredicted RBP4.48□□□□□ -1.69
USP38-203ENST00000511739 CTSZQ9UBR2 303 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 ETDBQ3ZM63 59 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 IGFL2Q6UWQ7 119 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 WFDC11Q8NEX6 87 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 CYYR1Q96J86 154 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 SPRY4Q9C004 299 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 DOPEY1Q5JWR5 2465 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 IGHV7-81A0A0B4J1V7 117 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 PSMB8P28062 276 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 UBE2D3P61077 147 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 CCL25O15444 150 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 DLEU1O43261 78 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 CUL9Q8IWT3 2517 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 NUP210LQ5VU65 1888 aa4.48□□□□□ -1.69
USP38-203ENST00000511739 F8W1H4 67 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 C15orf65H3BRN8 121 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 M0R2N4 97 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 ADORA2A-AS1P86434 159 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 FAM231DQ6ZW35 169 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 TRAV26-1A0A087WT03 109 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 NDUFS6O75380 124 aaKnown RBP4.47□□□□□ -1.69
USP38-203ENST00000511739 CTSGP08311 255 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 IGLC2P0DOY2 106 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 IGLC3P0DOY3 106 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 LYPD6BQ8NI32 183 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 SMIM27A0A1W2PRY6 76 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 TRBV12-3P01733 135 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 LINC01620Q4KN68 170 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 ODF3L1Q8IXM7 274 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.47□□□□□ -1.69
USP38-203ENST00000511739 FXYD5Q96DB9 178 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 IGLV2-18A0A075B6J9 118 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 LOC105371267A0A1B0GV96 52 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 COX7BP24311 80 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 PCDH15Q96QU1 1955 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 IGKV1-17P01599 117 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 ODF1Q14990 250 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 C5orf56Q8N8D9 126 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 CEP192Q8TEP8 1941 aa4.47□□□□□ -1.69
USP38-203ENST00000511739 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.69
USP38-203ENST00000511739 WIPF3A6NGB9 483 aa4.46□□□□□ -1.69
USP38-203ENST00000511739 NFE4Q86UQ8 179 aa4.46□□□□□ -1.69
USP38-203ENST00000511739 Q8N1Y9 231 aa4.46□□□□□ -1.69
USP38-203ENST00000511739 TMEM263Q8WUH6 116 aaKnown RBP4.46□□□□□ -1.69
USP38-203ENST00000511739 MALRD1Q5VYJ5 2156 aa4.46□□□□□ -1.69
USP38-203ENST00000511739 IGKV1D-37A0A075B6S9 117 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 TMEM89A2RUT3 159 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 C16orf54Q6UWD8 224 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 C9orf85Q96MD7 179 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 LRP4O75096 1905 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 A0A0J9YXV3 536 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 COLCA2A8K830 154 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 K7EMT4 169 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 Q8N9W7 124 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 RPL39LQ96EH5 51 aaKnown RBP4.46□□□□□ -1.7
USP38-203ENST00000511739 FAM110AQ9BQ89 295 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 IGLC7A0M8Q6 106 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms